RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 CHST9Q7L1S5 443 aa21.24■□□□□ 0.99
VTI1B-205ENST00000555543 ADIPOR2Q86V24 386 aa21.24■□□□□ 0.99
VTI1B-205ENST00000555543 MFN1Q8IWA4 741 aa21.24■□□□□ 0.99
VTI1B-205ENST00000555543 PGBD3Q8N328 593 aa21.24■□□□□ 0.99
VTI1B-205ENST00000555543 ATP6V0D2Q8N8Y2 350 aa21.24■□□□□ 0.99
VTI1B-205ENST00000555543 WFIKKN2Q8TEU8 576 aa21.24■□□□□ 0.99
VTI1B-205ENST00000555543 UCMAQ8WVF2 138 aa21.24■□□□□ 0.99
VTI1B-205ENST00000555543 PRMT1Q99873 361 aaKnown RBP21.24■□□□□ 0.99
VTI1B-205ENST00000555543 SLC6A17Q9H1V8 727 aa21.24■□□□□ 0.99
VTI1B-205ENST00000555543 CBX8Q9HC52 389 aa21.24■□□□□ 0.99
VTI1B-205ENST00000555543 PIGVQ9NUD9 493 aa21.24■□□□□ 0.99
VTI1B-205ENST00000555543 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.24■□□□□ 0.99
VTI1B-205ENST00000555543 M0QYT0 321 aa21.23■□□□□ 0.99
VTI1B-205ENST00000555543 EPN2O95208 641 aa21.23■□□□□ 0.99
VTI1B-205ENST00000555543 PRKCHP24723 683 aa21.23■□□□□ 0.99
VTI1B-205ENST00000555543 CCR1P32246 355 aa21.23■□□□□ 0.99
VTI1B-205ENST00000555543 FLT3P36888 993 aa21.23■□□□□ 0.99
VTI1B-205ENST00000555543 MAP7D1Q3KQU3 841 aa21.23■□□□□ 0.99
VTI1B-205ENST00000555543 FUT11Q495W5 492 aa21.23■□□□□ 0.99
VTI1B-205ENST00000555543 SLC30A5Q8TAD4 765 aa21.23■□□□□ 0.99
VTI1B-205ENST00000555543 CYB5D2Q8WUJ1 264 aa21.23■□□□□ 0.99
VTI1B-205ENST00000555543 RNF34Q969K3 372 aa21.23■□□□□ 0.99
VTI1B-205ENST00000555543 NT5C3BQ969T7 300 aa21.23■□□□□ 0.99
VTI1B-205ENST00000555543 NAP1L5Q96NT1 182 aaPredicted RBP21.23■□□□□ 0.99
VTI1B-205ENST00000555543 MBD1Q9UIS9 605 aaPredicted RBP21.23■□□□□ 0.99
VTI1B-205ENST00000555543 USP18Q9UMW8 372 aa21.23■□□□□ 0.99
VTI1B-205ENST00000555543 ABCA7Q8IZY2 2146 aa21.23■□□□□ 0.99
VTI1B-205ENST00000555543 PLXND1Q9Y4D7 1925 aa21.23■□□□□ 0.99
VTI1B-205ENST00000555543 A0A1B0GTH6 734 aa21.22■□□□□ 0.99
VTI1B-205ENST00000555543 TYW5A2RUC4 315 aaKnown RBP21.22■□□□□ 0.99
VTI1B-205ENST00000555543 I6L893 689 aaPredicted RBP21.22■□□□□ 0.99
VTI1B-205ENST00000555543 NPC1O15118 1278 aa21.22■□□□□ 0.99
VTI1B-205ENST00000555543 SLC2A3P11169 496 aa21.22■□□□□ 0.99
VTI1B-205ENST00000555543 ABCB4P21439 1286 aa21.22■□□□□ 0.99
VTI1B-205ENST00000555543 MMP8P22894 467 aa21.22■□□□□ 0.99
VTI1B-205ENST00000555543 GGCXP38435 758 aa21.22■□□□□ 0.99
VTI1B-205ENST00000555543 SULT1E1P49888 294 aa21.22■□□□□ 0.99
VTI1B-205ENST00000555543 LMAN2Q12907 356 aa21.22■□□□□ 0.99
VTI1B-205ENST00000555543 CCDC6Q16204 474 aa21.22■□□□□ 0.99
VTI1B-205ENST00000555543 FSCBQ5H9T9 825 aa21.22■□□□□ 0.99
VTI1B-205ENST00000555543 PMS2CLQ68D20 193 aa21.22■□□□□ 0.99
VTI1B-205ENST00000555543 LUZP1Q86V48 1076 aa21.22■□□□□ 0.99
VTI1B-205ENST00000555543 CIR1Q86X95 450 aaPredicted RBP21.22■□□□□ 0.99
VTI1B-205ENST00000555543 AHI1Q8N157 1196 aa21.22■□□□□ 0.99
VTI1B-205ENST00000555543 CARNMT1Q8N4J0 409 aa21.22■□□□□ 0.99
VTI1B-205ENST00000555543 MSANTD4Q8NCY6 345 aa21.22■□□□□ 0.99
VTI1B-205ENST00000555543 FIBINQ8TAL6 211 aa21.22■□□□□ 0.99
VTI1B-205ENST00000555543 BAP1Q92560 729 aa21.22■□□□□ 0.99
VTI1B-205ENST00000555543 LOXL4Q96JB6 756 aa21.22■□□□□ 0.99
VTI1B-205ENST00000555543 TBCBQ99426 244 aa21.22■□□□□ 0.99
VTI1B-205ENST00000555543 C11orf70Q9BRQ4 267 aa21.22■□□□□ 0.99
VTI1B-205ENST00000555543 ARRDC1-AS1Q9H2J1 176 aa21.22■□□□□ 0.99
VTI1B-205ENST00000555543 CD93Q9NPY3 652 aa21.22■□□□□ 0.99
VTI1B-205ENST00000555543 ANLNQ9NQW6 1124 aa21.22■□□□□ 0.99
VTI1B-205ENST00000555543 SEMA4GQ9NTN9 838 aa21.22■□□□□ 0.99
VTI1B-205ENST00000555543 TMEM59LQ9UK28 342 aa21.22■□□□□ 0.99
VTI1B-205ENST00000555543 INTS6Q9UL03 887 aaKnown RBP21.22■□□□□ 0.99
VTI1B-205ENST00000555543 LAMA1P25391 3075 aa21.21■□□□□ 0.99
VTI1B-205ENST00000555543 CKAP5Q14008 2032 aa21.21■□□□□ 0.99
VTI1B-205ENST00000555543 DNAH14Q0VDD8 3507 aa21.21■□□□□ 0.99
VTI1B-205ENST00000555543 TIMM44O43615 452 aa21.21■□□□□ 0.99
VTI1B-205ENST00000555543 LRP3O75074 770 aa21.21■□□□□ 0.99
VTI1B-205ENST00000555543 LUC7L3O95232 432 aaKnown RBP21.21■□□□□ 0.99
VTI1B-205ENST00000555543 UNGP13051 313 aaPredicted RBP21.21■□□□□ 0.99
VTI1B-205ENST00000555543 CDH18Q13634 790 aa21.21■□□□□ 0.99
VTI1B-205ENST00000555543 ELF2Q15723 593 aa21.21■□□□□ 0.99
VTI1B-205ENST00000555543 PTPRNQ16849 979 aa21.21■□□□□ 0.99
VTI1B-205ENST00000555543 MBLAC2Q68D91 279 aa21.21■□□□□ 0.99
VTI1B-205ENST00000555543 PHLDB2Q86SQ0 1253 aa21.21■□□□□ 0.99
VTI1B-205ENST00000555543 MRGPRX1Q96LB2 322 aa21.21■□□□□ 0.99
VTI1B-205ENST00000555543 METTL5Q9NRN9 209 aaKnown RBP21.21■□□□□ 0.99
VTI1B-205ENST00000555543 RRN3Q9NYV6 651 aa21.21■□□□□ 0.99
VTI1B-205ENST00000555543 SLC12A6Q9UHW9 1150 aa21.21■□□□□ 0.99
VTI1B-205ENST00000555543 STAP1Q9ULZ2 295 aa21.21■□□□□ 0.99
VTI1B-205ENST00000555543 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.21■□□□□ 0.99
VTI1B-205ENST00000555543 F5H5T6 163 aa21.2■□□□□ 0.98
VTI1B-205ENST00000555543 ADCY5O95622 1261 aa21.2■□□□□ 0.98
VTI1B-205ENST00000555543 HLA-EP13747 358 aa21.2■□□□□ 0.98
VTI1B-205ENST00000555543 PTMSP20962 102 aa21.2■□□□□ 0.98
VTI1B-205ENST00000555543 CXCR3P49682 368 aa21.2■□□□□ 0.98
VTI1B-205ENST00000555543 IRAK1P51617 712 aa21.2■□□□□ 0.98
VTI1B-205ENST00000555543 ATXN1P54253 815 aaKnown RBP21.2■□□□□ 0.98
VTI1B-205ENST00000555543 CENPCQ03188 943 aa21.2■□□□□ 0.98
VTI1B-205ENST00000555543 PTP4A2Q12974 167 aa21.2■□□□□ 0.98
VTI1B-205ENST00000555543 STARD3Q14849 445 aa21.2■□□□□ 0.98
VTI1B-205ENST00000555543 CLEC16AQ2KHT3 1053 aa21.2■□□□□ 0.98
VTI1B-205ENST00000555543 ZSCAN23Q3MJ62 389 aa21.2■□□□□ 0.98
VTI1B-205ENST00000555543 FBXL22Q6P050 247 aa21.2■□□□□ 0.98
VTI1B-205ENST00000555543 SERPINA13PQ6UXR4 307 aa21.2■□□□□ 0.98
VTI1B-205ENST00000555543 TRIM72Q6ZMU5 477 aa21.2■□□□□ 0.98
VTI1B-205ENST00000555543 GPR161Q8N6U8 529 aaKnown RBP21.2■□□□□ 0.98
VTI1B-205ENST00000555543 EMC1Q8N766 993 aa21.2■□□□□ 0.98
VTI1B-205ENST00000555543 ZNF366Q8N895 744 aa21.2■□□□□ 0.98
VTI1B-205ENST00000555543 PGAP3Q96FM1 320 aaPredicted RBP21.2■□□□□ 0.98
VTI1B-205ENST00000555543 SPACA7Q96KW9 195 aa21.2■□□□□ 0.98
VTI1B-205ENST00000555543 MKRN2Q9H000 416 aaKnown RBP21.2■□□□□ 0.98
VTI1B-205ENST00000555543 SMOC1Q9H4F8 434 aa21.2■□□□□ 0.98
VTI1B-205ENST00000555543 HS3ST4Q9Y661 456 aa21.2■□□□□ 0.98
VTI1B-205ENST00000555543 PAGE1O75459 146 aa21.19■□□□□ 0.98
VTI1B-205ENST00000555543 RHOBTB1O94844 696 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 131.2 ms