RNA–Protein interactions for RNA: ENST00000555537.1

NEK9-206, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 675 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-206ENST00000555537 BROXQ5VW32 411 aa8.73□□□□□ -1.01
NEK9-206ENST00000555537 RFWD3Q6PCD5 774 aa8.73□□□□□ -1.01
NEK9-206ENST00000555537 SV2AQ7L0J3 742 aa8.73□□□□□ -1.01
NEK9-206ENST00000555537 SLC25A45Q8N413 288 aa8.73□□□□□ -1.01
NEK9-206ENST00000555537 OR14C36Q8NHC7 312 aa8.73□□□□□ -1.01
NEK9-206ENST00000555537 WFIKKN2Q8TEU8 576 aa8.73□□□□□ -1.01
NEK9-206ENST00000555537 RFFLQ8WZ73 363 aa8.73□□□□□ -1.01
NEK9-206ENST00000555537 TTC9Q92623 222 aa8.73□□□□□ -1.01
NEK9-206ENST00000555537 DHX58Q96C10 678 aa8.73□□□□□ -1.01
NEK9-206ENST00000555537 WBP1Q96G27 269 aa8.73□□□□□ -1.01
NEK9-206ENST00000555537 MYO19Q96H55 970 aa8.73□□□□□ -1.01
NEK9-206ENST00000555537 HIC2Q96JB3 615 aa8.73□□□□□ -1.01
NEK9-206ENST00000555537 USP28Q96RU2 1077 aa8.73□□□□□ -1.01
NEK9-206ENST00000555537 CDK5RAP1Q96SZ6 601 aaKnown RBP8.73□□□□□ -1.01
NEK9-206ENST00000555537 OMDQ99983 421 aa8.73□□□□□ -1.01
NEK9-206ENST00000555537 NT5C1AQ9BXI3 368 aa8.73□□□□□ -1.01
NEK9-206ENST00000555537 TRIM4Q9C037 500 aa8.73□□□□□ -1.01
NEK9-206ENST00000555537 OSBPL2Q9H1P3 480 aa8.73□□□□□ -1.01
NEK9-206ENST00000555537 BLZF1Q9H2G9 400 aa8.73□□□□□ -1.01
NEK9-206ENST00000555537 TNMDQ9H2S6 317 aa8.73□□□□□ -1.01
NEK9-206ENST00000555537 APOBEC3GQ9HC16 384 aaKnown RBP8.73□□□□□ -1.01
NEK9-206ENST00000555537 PNPLA8Q9NP80 782 aa8.73□□□□□ -1.01
NEK9-206ENST00000555537 KBTBD4Q9NVX7 518 aa8.73□□□□□ -1.01
NEK9-206ENST00000555537 STIM2Q9P246 746 aa8.73□□□□□ -1.01
NEK9-206ENST00000555537 TFIP11Q9UBB9 837 aaKnown RBP8.73□□□□□ -1.01
NEK9-206ENST00000555537 STRIP2Q9ULQ0 834 aa8.73□□□□□ -1.01
NEK9-206ENST00000555537 ZNF462Q96JM2 2506 aa8.73□□□□□ -1.01
NEK9-206ENST00000555537 LRRC72A6NJI9 287 aa8.72□□□□□ -1.01
NEK9-206ENST00000555537 TULP2O00295 520 aa8.72□□□□□ -1.01
NEK9-206ENST00000555537 TBL1XO60907 577 aa8.72□□□□□ -1.01
NEK9-206ENST00000555537 ASS1P00966 412 aaKnown RBP8.72□□□□□ -1.01
NEK9-206ENST00000555537 HLA-DRAP01903 254 aa8.72□□□□□ -1.01
NEK9-206ENST00000555537 RPN1P04843 607 aaKnown RBP8.72□□□□□ -1.01
NEK9-206ENST00000555537 ATP5BP06576 529 aaKnown RBP8.72□□□□□ -1.01
NEK9-206ENST00000555537 ACP1P24666 158 aa8.72□□□□□ -1.01
NEK9-206ENST00000555537 MAT2AP31153 395 aaKnown RBP8.72□□□□□ -1.01
NEK9-206ENST00000555537 SLC8A1P32418 973 aa8.72□□□□□ -1.01
NEK9-206ENST00000555537 CTSOP43234 321 aaPredicted RBP8.72□□□□□ -1.01
NEK9-206ENST00000555537 RXRGP48443 463 aa8.72□□□□□ -1.01
NEK9-206ENST00000555537 HARS2P49590 506 aaKnown RBP8.72□□□□□ -1.01
NEK9-206ENST00000555537 AP3M2P53677 418 aa8.72□□□□□ -1.01
NEK9-206ENST00000555537 PCBP4P57723 403 aaKnown RBP8.72□□□□□ -1.01
NEK9-206ENST00000555537 SNRPFP62306 86 aaKnown RBP8.72□□□□□ -1.01
NEK9-206ENST00000555537 PPP2CBP62714 309 aa8.72□□□□□ -1.01
NEK9-206ENST00000555537 PPP2CAP67775 309 aa8.72□□□□□ -1.01
NEK9-206ENST00000555537 GABREP78334 506 aa8.72□□□□□ -1.01
NEK9-206ENST00000555537 ILKQ13418 452 aa8.72□□□□□ -1.01
NEK9-206ENST00000555537 SLC39A14Q15043 492 aa8.72□□□□□ -1.01
NEK9-206ENST00000555537 RABEP1Q15276 862 aa8.72□□□□□ -1.01
NEK9-206ENST00000555537 CST6Q15828 149 aa8.72□□□□□ -1.01
NEK9-206ENST00000555537 E2F4Q16254 413 aa8.72□□□□□ -1.01
NEK9-206ENST00000555537 KNOP1Q1ED39 458 aaKnown RBP8.72□□□□□ -1.01
NEK9-206ENST00000555537 PROX2Q3B8N5 592 aa8.72□□□□□ -1.01
NEK9-206ENST00000555537 ZACNQ401N2 412 aa8.72□□□□□ -1.01
NEK9-206ENST00000555537 C1orf220Q5T0J3 134 aa8.72□□□□□ -1.01
NEK9-206ENST00000555537 C9orf64Q5T6V5 341 aa8.72□□□□□ -1.01
NEK9-206ENST00000555537 MMS22LQ6ZRQ5 1243 aa8.72□□□□□ -1.01
NEK9-206ENST00000555537 USP30Q70CQ3 517 aa8.72□□□□□ -1.01
NEK9-206ENST00000555537 PRICKLE2Q7Z3G6 844 aa8.72□□□□□ -1.01
NEK9-206ENST00000555537 TMC6Q7Z403 805 aa8.72□□□□□ -1.01
NEK9-206ENST00000555537 PIGZQ86VD9 579 aa8.72□□□□□ -1.01
NEK9-206ENST00000555537 C12orf56Q8IXR9 622 aa8.72□□□□□ -1.01
NEK9-206ENST00000555537 AHI1Q8N157 1196 aa8.72□□□□□ -1.01
NEK9-206ENST00000555537 AADATQ8N5Z0 425 aa8.72□□□□□ -1.01
NEK9-206ENST00000555537 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.72□□□□□ -1.01
NEK9-206ENST00000555537 OR2T34Q8NGX1 318 aa8.72□□□□□ -1.01
NEK9-206ENST00000555537 KCNE4Q8WWG9 221 aa8.72□□□□□ -1.01
NEK9-206ENST00000555537 EDEM1Q92611 657 aa8.72□□□□□ -1.01
NEK9-206ENST00000555537 GOLGA1Q92805 767 aa8.72□□□□□ -1.01
NEK9-206ENST00000555537 PLD4Q96BZ4 506 aa8.72□□□□□ -1.01
NEK9-206ENST00000555537 HEXIM2Q96MH2 286 aaKnown RBP8.72□□□□□ -1.01
NEK9-206ENST00000555537 ZNF578Q96N58 590 aaPredicted RBP8.72□□□□□ -1.01
NEK9-206ENST00000555537 FBRSQ9HAH7 460 aa8.72□□□□□ -1.01
NEK9-206ENST00000555537 ADAMTS1Q9UHI8 967 aa8.72□□□□□ -1.01
NEK9-206ENST00000555537 INTS6Q9UL03 887 aaKnown RBP8.72□□□□□ -1.01
NEK9-206ENST00000555537 CA5BQ9Y2D0 317 aa8.72□□□□□ -1.01
NEK9-206ENST00000555537 PTPRQQ9UMZ3 2332 aa8.72□□□□□ -1.01
NEK9-206ENST00000555537 CFAP46Q8IYW2 2715 aa8.71□□□□□ -1.01
NEK9-206ENST00000555537 TBC1D3DA0A087WVF3 549 aa8.71□□□□□ -1.02
NEK9-206ENST00000555537 TBC1D3IA0A087WXS9 549 aa8.71□□□□□ -1.02
NEK9-206ENST00000555537 TBC1D3EA0A087X179 549 aa8.71□□□□□ -1.02
NEK9-206ENST00000555537 TBC1D3KA0A087X1G2 549 aa8.71□□□□□ -1.02
NEK9-206ENST00000555537 TBC1D3FA6NER0 549 aaPredicted RBP8.71□□□□□ -1.02
NEK9-206ENST00000555537 TTC34A8MYJ7 566 aa8.71□□□□□ -1.02
NEK9-206ENST00000555537 C10orf142B7Z368 130 aa8.71□□□□□ -1.02
NEK9-206ENST00000555537 TBC1D3LB9A6J9 549 aa8.71□□□□□ -1.02
NEK9-206ENST00000555537 YKT6O15498 198 aa8.71□□□□□ -1.02
NEK9-206ENST00000555537 MSI1O43347 362 aaKnown RBP8.71□□□□□ -1.02
NEK9-206ENST00000555537 RNASEH1O60930 286 aaKnown RBP8.71□□□□□ -1.02
NEK9-206ENST00000555537 USP12O75317 370 aa8.71□□□□□ -1.02
NEK9-206ENST00000555537 TBC1D3HP0C7X1 549 aa8.71□□□□□ -1.02
NEK9-206ENST00000555537 SLC6A4P31645 630 aa8.71□□□□□ -1.02
NEK9-206ENST00000555537 CSKP41240 450 aa8.71□□□□□ -1.02
NEK9-206ENST00000555537 PIK3CAP42336 1068 aa8.71□□□□□ -1.02
NEK9-206ENST00000555537 PSMD8P48556 350 aa8.71□□□□□ -1.02
NEK9-206ENST00000555537 CCR5P51681 352 aa8.71□□□□□ -1.02
NEK9-206ENST00000555537 TKTL1P51854 596 aa8.71□□□□□ -1.02
NEK9-206ENST00000555537 METAP1P53582 386 aa8.71□□□□□ -1.02
NEK9-206ENST00000555537 DAB2P98082 770 aa8.71□□□□□ -1.02
NEK9-206ENST00000555537 E2F1Q01094 437 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms