RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 RETSATQ6NUM9 610 aa6.01□□□□□ -1.45
VRK1-205ENST00000555402 PTCHD4Q6ZW05 846 aa6.01□□□□□ -1.45
VRK1-205ENST00000555402 RSRC2Q7L4I2 434 aaKnown RBP6.01□□□□□ -1.45
VRK1-205ENST00000555402 RFKQ969G6 155 aa6.01□□□□□ -1.45
VRK1-205ENST00000555402 SKA1Q96BD8 255 aa6.01□□□□□ -1.45
VRK1-205ENST00000555402 CTHRC1Q96CG8 243 aa6.01□□□□□ -1.45
VRK1-205ENST00000555402 CINPQ9BW66 212 aaPredicted RBP6.01□□□□□ -1.45
VRK1-205ENST00000555402 AMFRQ9UKV5 643 aa6.01□□□□□ -1.45
VRK1-205ENST00000555402 TRPC5Q9UL62 973 aaPredicted RBP6.01□□□□□ -1.45
VRK1-205ENST00000555402 ASAP1Q9ULH1 1129 aa6.01□□□□□ -1.45
VRK1-205ENST00000555402 ZBTB1Q9Y2K1 713 aa6.01□□□□□ -1.45
VRK1-205ENST00000555402 CNTNAP2Q9UHC6 1331 aa6□□□□□ -1.45
VRK1-205ENST00000555402 TBC1D3DA0A087WVF3 549 aa6□□□□□ -1.45
VRK1-205ENST00000555402 TBC1D3IA0A087WXS9 549 aa6□□□□□ -1.45
VRK1-205ENST00000555402 TBC1D3EA0A087X179 549 aa6□□□□□ -1.45
VRK1-205ENST00000555402 TBC1D3KA0A087X1G2 549 aa6□□□□□ -1.45
VRK1-205ENST00000555402 TBC1D3BA6NDS4 549 aa6□□□□□ -1.45
VRK1-205ENST00000555402 TBC1D3FA6NER0 549 aaPredicted RBP6□□□□□ -1.45
VRK1-205ENST00000555402 A6NLC8 198 aa6□□□□□ -1.45
VRK1-205ENST00000555402 TBC1D3LB9A6J9 549 aa6□□□□□ -1.45
VRK1-205ENST00000555402 STX16-NPEPL1H3BU86 382 aa6□□□□□ -1.45
VRK1-205ENST00000555402 QSOX1O00391 747 aa6□□□□□ -1.45
VRK1-205ENST00000555402 STX16O14662 325 aa6□□□□□ -1.45
VRK1-205ENST00000555402 TMPRSS11DO60235 418 aa6□□□□□ -1.45
VRK1-205ENST00000555402 MBD4O95243 580 aa6□□□□□ -1.45
VRK1-205ENST00000555402 TBC1D3HP0C7X1 549 aa6□□□□□ -1.45
VRK1-205ENST00000555402 CPA1P15085 419 aa6□□□□□ -1.45
VRK1-205ENST00000555402 KRT9P35527 623 aa6□□□□□ -1.45
VRK1-205ENST00000555402 MCM2P49736 904 aa6□□□□□ -1.45
VRK1-205ENST00000555402 CDK7P50613 346 aa6□□□□□ -1.45
VRK1-205ENST00000555402 GEMIN4P57678 1058 aaKnown RBP6□□□□□ -1.45
VRK1-205ENST00000555402 AAK1Q2M2I8 961 aa6□□□□□ -1.45
VRK1-205ENST00000555402 TBC1D25Q3MII6 688 aa6□□□□□ -1.45
VRK1-205ENST00000555402 CTXN3Q4LDR2 81 aa6□□□□□ -1.45
VRK1-205ENST00000555402 L1TD1Q5T7N2 865 aaKnown RBP6□□□□□ -1.45
VRK1-205ENST00000555402 TBC1D3GQ6DHY5 549 aa6□□□□□ -1.45
VRK1-205ENST00000555402 TBC1D3CQ6IPX1 549 aa6□□□□□ -1.45
VRK1-205ENST00000555402 ZNF782Q6ZMW2 699 aaPredicted RBP6□□□□□ -1.45
VRK1-205ENST00000555402 Q6ZWC4 215 aa6□□□□□ -1.45
VRK1-205ENST00000555402 ZNF551Q7Z340 670 aaPredicted RBP6□□□□□ -1.45
VRK1-205ENST00000555402 ANKS1BQ7Z6G8 1248 aa6□□□□□ -1.45
VRK1-205ENST00000555402 TBC1D3Q8IZP1 549 aaPredicted RBP6□□□□□ -1.45
VRK1-205ENST00000555402 DDX51Q8N8A6 666 aaKnown RBP eCLIP6□□□□□ -1.45
VRK1-205ENST00000555402 FAM71DQ8N9W8 422 aa6□□□□□ -1.45
VRK1-205ENST00000555402 ABHD11Q8NFV4 315 aa6□□□□□ -1.45
VRK1-205ENST00000555402 RP9Q8TA86 221 aaKnown RBP6□□□□□ -1.45
VRK1-205ENST00000555402 HVCN1Q96D96 273 aa6□□□□□ -1.45
VRK1-205ENST00000555402 USP29Q9HBJ7 922 aa6□□□□□ -1.45
VRK1-205ENST00000555402 UBN1Q9NPG3 1134 aa6□□□□□ -1.45
VRK1-205ENST00000555402 SNX15Q9NRS6 342 aa6□□□□□ -1.45
VRK1-205ENST00000555402 RASSF1Q9NS23 344 aa6□□□□□ -1.45
VRK1-205ENST00000555402 SMC4Q9NTJ3 1288 aa6□□□□□ -1.45
VRK1-205ENST00000555402 TMLHEQ9NVH6 421 aa6□□□□□ -1.45
VRK1-205ENST00000555402 ST3GAL5Q9UNP4 418 aa6□□□□□ -1.45
VRK1-205ENST00000555402 CCDC187A0A096LP49 1063 aa5.99□□□□□ -1.45
VRK1-205ENST00000555402 LOC105369274A0A096LPK9 316 aa5.99□□□□□ -1.45
VRK1-205ENST00000555402 LOC102723532A0A0G2JNH3 316 aa5.99□□□□□ -1.45
VRK1-205ENST00000555402 WDR27A2RRH5 827 aa5.99□□□□□ -1.45
VRK1-205ENST00000555402 M0QZQ0 153 aa5.99□□□□□ -1.45
VRK1-205ENST00000555402 SEPT4O43236 478 aa5.99□□□□□ -1.45
VRK1-205ENST00000555402 URI1O94763 535 aaPredicted RBP5.99□□□□□ -1.45
VRK1-205ENST00000555402 TTLL1O95922 423 aa5.99□□□□□ -1.45
VRK1-205ENST00000555402 PEPDP12955 493 aa5.99□□□□□ -1.45
VRK1-205ENST00000555402 ELF1P32519 619 aa5.99□□□□□ -1.45
VRK1-205ENST00000555402 GRK5P34947 590 aa5.99□□□□□ -1.45
VRK1-205ENST00000555402 IGHMBP2P38935 993 aaKnown RBP5.99□□□□□ -1.45
VRK1-205ENST00000555402 TUBP50607 506 aa5.99□□□□□ -1.45
VRK1-205ENST00000555402 CCT4P50991 539 aaKnown RBP5.99□□□□□ -1.45
VRK1-205ENST00000555402 RBM6P78332 1123 aaKnown RBP5.99□□□□□ -1.45
VRK1-205ENST00000555402 CHRNDQ07001 517 aa5.99□□□□□ -1.45
VRK1-205ENST00000555402 RUSC1-AS1Q66K80 236 aa5.99□□□□□ -1.45
VRK1-205ENST00000555402 OR4N4Q8N0Y3 316 aa5.99□□□□□ -1.45
VRK1-205ENST00000555402 FSIP1Q8NA03 581 aa5.99□□□□□ -1.45
VRK1-205ENST00000555402 NPIPB3Q92617 1050 aa5.99□□□□□ -1.45
VRK1-205ENST00000555402 HTRA1Q92743 480 aa5.99□□□□□ -1.45
VRK1-205ENST00000555402 PRR11Q96HE9 360 aaPredicted RBP5.99□□□□□ -1.45
VRK1-205ENST00000555402 TWNKQ96RR1 684 aa5.99□□□□□ -1.45
VRK1-205ENST00000555402 SEMA4CQ9C0C4 833 aa5.99□□□□□ -1.45
VRK1-205ENST00000555402 UNC45AQ9H3U1 944 aa5.99□□□□□ -1.45
VRK1-205ENST00000555402 SAP30LQ9HAJ7 183 aa5.99□□□□□ -1.45
VRK1-205ENST00000555402 GABRQQ9UN88 632 aa5.99□□□□□ -1.45
VRK1-205ENST00000555402 SLC12A4Q9UP95 1085 aa5.99□□□□□ -1.45
VRK1-205ENST00000555402 DNAJC16Q9Y2G8 782 aa5.99□□□□□ -1.45
VRK1-205ENST00000555402 PCDHA10Q9Y5I2 948 aa5.99□□□□□ -1.45
VRK1-205ENST00000555402 GXYLT2A0PJZ3 443 aa5.98□□□□□ -1.45
VRK1-205ENST00000555402 AGAP5A6NIR3 686 aa5.98□□□□□ -1.45
VRK1-205ENST00000555402 LINC00473A8K010 186 aa5.98□□□□□ -1.45
VRK1-205ENST00000555402 NPSP0C0P6 89 aa5.98□□□□□ -1.45
VRK1-205ENST00000555402 EBLN1P0CF75 366 aa5.98□□□□□ -1.45
VRK1-205ENST00000555402 TMIGD3P0DMS9 266 aaPredicted RBP5.98□□□□□ -1.45
VRK1-205ENST00000555402 CCR5P51681 352 aa5.98□□□□□ -1.45
VRK1-205ENST00000555402 FAM3BP58499 235 aaPredicted RBP5.98□□□□□ -1.45
VRK1-205ENST00000555402 RPL15P61313 204 aaKnown RBP5.98□□□□□ -1.45
VRK1-205ENST00000555402 CCDC15Q0P6D6 951 aa5.98□□□□□ -1.45
VRK1-205ENST00000555402 DNASE1L3Q13609 305 aa5.98□□□□□ -1.45
VRK1-205ENST00000555402 LRRC24Q50LG9 513 aa5.98□□□□□ -1.45
VRK1-205ENST00000555402 MAP3K21Q5TCX8 1036 aa5.98□□□□□ -1.45
VRK1-205ENST00000555402 C16orf89Q6UX73 402 aa5.98□□□□□ -1.45
VRK1-205ENST00000555402 WDR53Q7Z5U6 358 aaPredicted RBP5.98□□□□□ -1.45
VRK1-205ENST00000555402 PNPLA1Q8N8W4 532 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms