RNA–Protein interactions for RNA: ENST00000555055.5

XRCC3-211, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC3, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-211ENST00000555055 SOCS4Q8WXH5 440 aa15.3■□□□□ 0.04
XRCC3-211ENST00000555055 TRAPPC9Q96Q05 1148 aa15.3■□□□□ 0.04
XRCC3-211ENST00000555055 SENP6Q9GZR1 1112 aaPredicted RBP15.3■□□□□ 0.04
XRCC3-211ENST00000555055 ARHGEF4Q9NR80 690 aa15.3■□□□□ 0.04
XRCC3-211ENST00000555055 PAPOLBQ9NRJ5 636 aaKnown RBP15.3■□□□□ 0.04
XRCC3-211ENST00000555055 NUDT5Q9UKK9 219 aa15.3■□□□□ 0.04
XRCC3-211ENST00000555055 LRCH1Q9Y2L9 728 aa15.3■□□□□ 0.04
XRCC3-211ENST00000555055 SLC10A3P09131 477 aa15.29■□□□□ 0.04
XRCC3-211ENST00000555055 FAM200BP0CF97 657 aa15.29■□□□□ 0.04
XRCC3-211ENST00000555055 NCAM1P13591 858 aa15.29■□□□□ 0.04
XRCC3-211ENST00000555055 TARSP26639 723 aaKnown RBP15.29■□□□□ 0.04
XRCC3-211ENST00000555055 PHBP35232 272 aa15.29■□□□□ 0.04
XRCC3-211ENST00000555055 RAB27AP51159 221 aa15.29■□□□□ 0.04
XRCC3-211ENST00000555055 MXRA7P84157 204 aa15.29■□□□□ 0.04
XRCC3-211ENST00000555055 PTK7Q13308 1070 aa15.29■□□□□ 0.04
XRCC3-211ENST00000555055 SLC25A52Q3SY17 297 aa15.29■□□□□ 0.04
XRCC3-211ENST00000555055 ZNF534Q76KX8 674 aa15.29■□□□□ 0.04
XRCC3-211ENST00000555055 TOP6BLQ8N6T0 577 aa15.29■□□□□ 0.04
XRCC3-211ENST00000555055 TCP10LQ8TDR4 215 aa15.29■□□□□ 0.04
XRCC3-211ENST00000555055 TMLHEQ9NVH6 421 aa15.29■□□□□ 0.04
XRCC3-211ENST00000555055 PAK5Q9P286 719 aa15.29■□□□□ 0.04
XRCC3-211ENST00000555055 ZC3H7BQ9UGR2 993 aaKnown RBP15.29■□□□□ 0.04
XRCC3-211ENST00000555055 HAO1Q9UJM8 370 aa15.29■□□□□ 0.04
XRCC3-211ENST00000555055 FZD10Q9ULW2 581 aa15.29■□□□□ 0.04
XRCC3-211ENST00000555055 BDNFP23560 247 aa15.29■□□□□ 0.04
XRCC3-211ENST00000555055 LRPAP1P30533 357 aa15.29■□□□□ 0.04
XRCC3-211ENST00000555055 DEUP1Q05D60 604 aa15.29■□□□□ 0.04
XRCC3-211ENST00000555055 OVGP1Q12889 678 aa15.29■□□□□ 0.04
XRCC3-211ENST00000555055 HEATR6Q6AI08 1181 aaKnown RBP15.29■□□□□ 0.04
XRCC3-211ENST00000555055 CES3Q6UWW8 571 aa15.29■□□□□ 0.04
XRCC3-211ENST00000555055 LIMS2Q7Z4I7 341 aa15.29■□□□□ 0.04
XRCC3-211ENST00000555055 FAM35AQ86V20 835 aa15.29■□□□□ 0.04
XRCC3-211ENST00000555055 ZDHHC17Q8IUH5 632 aa15.29■□□□□ 0.04
XRCC3-211ENST00000555055 IFT43Q96FT9 208 aa15.29■□□□□ 0.04
XRCC3-211ENST00000555055 ZNF333Q96JL9 665 aa15.29■□□□□ 0.04
XRCC3-211ENST00000555055 HSFY1Q96LI6 401 aa15.29■□□□□ 0.04
XRCC3-211ENST00000555055 FRMD8P1Q9BZ68 369 aaPredicted RBP15.29■□□□□ 0.04
XRCC3-211ENST00000555055 XPNPEP3Q9NQH7 507 aa15.29■□□□□ 0.04
XRCC3-211ENST00000555055 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.29■□□□□ 0.04
XRCC3-211ENST00000555055 USP3Q9Y6I4 520 aa15.29■□□□□ 0.04
XRCC3-211ENST00000555055 GABRDO14764 452 aa15.28■□□□□ 0.04
XRCC3-211ENST00000555055 NDC80O14777 642 aa15.28■□□□□ 0.04
XRCC3-211ENST00000555055 TYROBPO43914 113 aa15.28■□□□□ 0.04
XRCC3-211ENST00000555055 USP12O75317 370 aa15.28■□□□□ 0.04
XRCC3-211ENST00000555055 OR4Q2P0C623 313 aa15.28■□□□□ 0.04
XRCC3-211ENST00000555055 DESP17661 470 aa15.28■□□□□ 0.04
XRCC3-211ENST00000555055 VHLP40337 213 aa15.28■□□□□ 0.04
XRCC3-211ENST00000555055 PCBP1Q15365 356 aaKnown RBP eCLIP15.28■□□□□ 0.04
XRCC3-211ENST00000555055 TRIM68Q6AZZ1 485 aa15.28■□□□□ 0.04
XRCC3-211ENST00000555055 PDCD7Q8N8D1 485 aaKnown RBP15.28■□□□□ 0.04
XRCC3-211ENST00000555055 RNF139Q8WU17 664 aa15.28■□□□□ 0.04
XRCC3-211ENST00000555055 MZB1Q8WU39 189 aa15.28■□□□□ 0.04
XRCC3-211ENST00000555055 AGAP3Q96P47 875 aa15.28■□□□□ 0.04
XRCC3-211ENST00000555055 KLC2Q9H0B6 622 aa15.28■□□□□ 0.04
XRCC3-211ENST00000555055 ZNF236Q9UL36 1845 aa15.28■□□□□ 0.04
XRCC3-211ENST00000555055 ZWINTO95229 277 aa15.28■□□□□ 0.04
XRCC3-211ENST00000555055 IGHA2P01877 340 aa15.28■□□□□ 0.04
XRCC3-211ENST00000555055 GMPRP36959 345 aa15.28■□□□□ 0.04
XRCC3-211ENST00000555055 ARL4AP40617 200 aa15.28■□□□□ 0.04
XRCC3-211ENST00000555055 PGFP49763 221 aa15.28■□□□□ 0.04
XRCC3-211ENST00000555055 SESN2P58004 480 aaPredicted RBP15.28■□□□□ 0.04
XRCC3-211ENST00000555055 EFHC1Q5JVL4 640 aa15.28■□□□□ 0.04
XRCC3-211ENST00000555055 CASC4Q6P4E1 433 aa15.28■□□□□ 0.04
XRCC3-211ENST00000555055 ADGRD1Q6QNK2 874 aa15.28■□□□□ 0.04
XRCC3-211ENST00000555055 SCAMP5Q8TAC9 235 aa15.28■□□□□ 0.04
XRCC3-211ENST00000555055 LRRC8CQ8TDW0 803 aa15.28■□□□□ 0.04
XRCC3-211ENST00000555055 DENND2DQ9H6A0 471 aaPredicted RBP15.28■□□□□ 0.04
XRCC3-211ENST00000555055 POPDC2Q9HBU9 364 aa15.28■□□□□ 0.04
XRCC3-211ENST00000555055 SCN10AQ9Y5Y9 1956 aa15.27■□□□□ 0.04
XRCC3-211ENST00000555055 BCLAF3A2AJT9 711 aaKnown RBP15.27■□□□□ 0.04
XRCC3-211ENST00000555055 NVLO15381 856 aaKnown RBP15.27■□□□□ 0.04
XRCC3-211ENST00000555055 B4GALT3O60512 393 aa15.27■□□□□ 0.04
XRCC3-211ENST00000555055 SMIM24O75264 130 aa15.27■□□□□ 0.04
XRCC3-211ENST00000555055 PYGBP11216 843 aa15.27■□□□□ 0.04
XRCC3-211ENST00000555055 SP100P23497 879 aaPredicted RBP15.27■□□□□ 0.04
XRCC3-211ENST00000555055 ACADSBP45954 432 aa15.27■□□□□ 0.04
XRCC3-211ENST00000555055 GJA9P57773 515 aa15.27■□□□□ 0.04
XRCC3-211ENST00000555055 ZRSR2Q15696 482 aaKnown RBP15.27■□□□□ 0.04
XRCC3-211ENST00000555055 CDHR3Q6ZTQ4 885 aa15.27■□□□□ 0.04
XRCC3-211ENST00000555055 SERINC5Q86VE9 423 aa15.27■□□□□ 0.04
XRCC3-211ENST00000555055 VPS52Q8N1B4 723 aa15.27■□□□□ 0.04
XRCC3-211ENST00000555055 PTPRN2Q92932 1015 aa15.27■□□□□ 0.04
XRCC3-211ENST00000555055 ADAM2Q99965 735 aa15.27■□□□□ 0.04
XRCC3-211ENST00000555055 RTP3Q9BQQ7 232 aa15.27■□□□□ 0.04
XRCC3-211ENST00000555055 FETUBQ9UGM5 382 aa15.27■□□□□ 0.04
XRCC3-211ENST00000555055 TTLL3Q9Y4R7 772 aa15.27■□□□□ 0.04
XRCC3-211ENST00000555055 CHADO15335 359 aa15.27■□□□□ 0.03
XRCC3-211ENST00000555055 PRKAR2AP13861 404 aaKnown RBP15.27■□□□□ 0.03
XRCC3-211ENST00000555055 RPL34P49207 117 aaKnown RBP15.27■□□□□ 0.03
XRCC3-211ENST00000555055 SNX16P57768 344 aa15.27■□□□□ 0.03
XRCC3-211ENST00000555055 PDCD2Q16342 344 aaPredicted RBP15.27■□□□□ 0.03
XRCC3-211ENST00000555055 THEMIS2Q5TEJ8 643 aa15.27■□□□□ 0.03
XRCC3-211ENST00000555055 HHATQ5VTY9 493 aa15.27■□□□□ 0.03
XRCC3-211ENST00000555055 C4orf50Q6ZRC1 276 aa15.27■□□□□ 0.03
XRCC3-211ENST00000555055 LRRTM3Q86VH5 581 aa15.27■□□□□ 0.03
XRCC3-211ENST00000555055 HTR3CQ8WXA8 447 aa15.27■□□□□ 0.03
XRCC3-211ENST00000555055 MYLPFQ96A32 169 aa15.27■□□□□ 0.03
XRCC3-211ENST00000555055 NPY6RQ99463 290 aa15.27■□□□□ 0.03
XRCC3-211ENST00000555055 CCDC28BQ9BUN5 200 aa15.27■□□□□ 0.03
XRCC3-211ENST00000555055 MMADHCQ9H3L0 296 aaPredicted RBP15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms