RNA–Protein interactions for RNA: ENST00000554943.5

PPP4R3A-206, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5 BASIC

Gene PPP4R3A, Length 3,369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-206ENST00000554943 CEP57Q86XR8 500 aa12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 CNTN4Q8IWV2 1026 aa12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 HDAC11Q96DB2 347 aa12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 NAT9Q9BTE0 207 aa12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 MECRQ9BV79 373 aa12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 C1QTNF1Q9BXJ1 281 aa12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 NMUR2Q9GZQ4 415 aa12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 RNF181Q9P0P0 153 aa12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 DNAJB4Q9UDY4 337 aa12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 ADAM28Q9UKQ2 775 aa12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 MIA3Q5JRA6 1907 aa12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 TARM1B6A8C7 271 aa12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 SERPINA6P08185 405 aa12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 EZRP15311 586 aaKnown RBP12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 CYP2B6P20813 491 aa12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 TAF6P49848 677 aa12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 ARFIP2P53365 341 aa12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 FAM171BQ6P995 826 aa12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 DSTYKQ6XUX3 929 aa12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 DEFB106AQ8N104 65 aa12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 RNF139Q8WU17 664 aa12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 IFT43Q96FT9 208 aa12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 DNAJC28Q9NX36 388 aa12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 FBXW11Q9UKB1 542 aa12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 PSAT1Q9Y617 370 aa12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 COL4A6Q14031 1691 aa12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 FAM72CH0Y354 149 aa12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 CYB561D2O14569 222 aa12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 SBK3P0C264 359 aa12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 ACADSP16219 412 aa12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 ZNF135P52742 658 aaPredicted RBP12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 MFSD10Q14728 455 aa12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 KHDC1Q4VXA5 237 aaKnown RBP12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 FAXCQ5TGI0 409 aa12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 FAM72AQ5TYM5 149 aa12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 SYPL2Q5VXT5 272 aa12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 FAM72DQ6L9T8 149 aa12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 PGM2L1Q6PCE3 622 aa12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 RFX8Q6ZV50 586 aa12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 BZW1Q7L1Q6 419 aaKnown RBP12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 PLEKHH3Q7Z736 793 aa12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 FAM72BQ86X60 149 aa12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 LRRN4Q8WUT4 740 aa12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 MRRFQ96E11 262 aaKnown RBP12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 THOC1Q96FV9 657 aaKnown RBP12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 ZNF419Q96HQ0 510 aaPredicted RBP12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 PPP1R16BQ96T49 567 aa12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 SMOQ99835 787 aa12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 MLPHQ9BV36 600 aaPredicted RBP12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 DNAI2Q9GZS0 605 aa12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 CXorf56Q9H5V9 222 aa12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 NGRNQ9NPE2 291 aaKnown RBP12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 BATF3Q9NR55 127 aa12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 THAP1Q9NVV9 213 aa12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 HEY1Q9Y5J3 304 aa12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 A8MXQ7 604 aa12.96□□□□□ -0.33
PPP4R3A-206ENST00000554943 COPEO14579 308 aa12.96□□□□□ -0.33
PPP4R3A-206ENST00000554943 KRT38O76015 456 aa12.96□□□□□ -0.33
PPP4R3A-206ENST00000554943 CAPNS1P04632 268 aa12.96□□□□□ -0.33
PPP4R3A-206ENST00000554943 CYP11A1P05108 521 aa12.96□□□□□ -0.33
PPP4R3A-206ENST00000554943 PTPN3P26045 913 aa12.96□□□□□ -0.33
PPP4R3A-206ENST00000554943 DAOAP59103 153 aa12.96□□□□□ -0.33
PPP4R3A-206ENST00000554943 YWHAGP61981 247 aaKnown RBP eCLIP12.96□□□□□ -0.33
PPP4R3A-206ENST00000554943 ACSBG2Q5FVE4 666 aa12.96□□□□□ -0.33
PPP4R3A-206ENST00000554943 C9orf131Q5VYM1 1079 aa12.96□□□□□ -0.33
PPP4R3A-206ENST00000554943 UNC5BQ8IZJ1 945 aa12.96□□□□□ -0.33
PPP4R3A-206ENST00000554943 NPWQ8N729 165 aa12.96□□□□□ -0.33
PPP4R3A-206ENST00000554943 FBXO27Q8NI29 283 aa12.96□□□□□ -0.33
PPP4R3A-206ENST00000554943 TTC8Q8TAM2 541 aa12.96□□□□□ -0.33
PPP4R3A-206ENST00000554943 CFAP36Q96G28 342 aa12.96□□□□□ -0.33
PPP4R3A-206ENST00000554943 MYCBPQ99417 103 aaPredicted RBP12.96□□□□□ -0.33
PPP4R3A-206ENST00000554943 LGMNQ99538 433 aa12.96□□□□□ -0.33
PPP4R3A-206ENST00000554943 OSMRQ99650 979 aa12.96□□□□□ -0.33
PPP4R3A-206ENST00000554943 BRD8Q9H0E9 1235 aa12.96□□□□□ -0.33
PPP4R3A-206ENST00000554943 TMPRSS4Q9NRS4 437 aa12.96□□□□□ -0.33
PPP4R3A-206ENST00000554943 G3V2L1 256 aa12.96□□□□□ -0.34
PPP4R3A-206ENST00000554943 FCHO1O14526 889 aa12.96□□□□□ -0.34
PPP4R3A-206ENST00000554943 NRP1O14786 923 aa12.96□□□□□ -0.34
PPP4R3A-206ENST00000554943 SMNDC1O75940 238 aaKnown RBP eCLIP12.96□□□□□ -0.34
PPP4R3A-206ENST00000554943 USP1O94782 785 aa12.96□□□□□ -0.34
PPP4R3A-206ENST00000554943 AP2A1O95782 977 aa12.96□□□□□ -0.34
PPP4R3A-206ENST00000554943 MYL2P10916 166 aa12.96□□□□□ -0.34
PPP4R3A-206ENST00000554943 CXCR3P49682 368 aa12.96□□□□□ -0.34
PPP4R3A-206ENST00000554943 MTM1Q13496 603 aa12.96□□□□□ -0.34
PPP4R3A-206ENST00000554943 BLMHQ13867 455 aa12.96□□□□□ -0.34
PPP4R3A-206ENST00000554943 SPANXN3Q5MJ09 141 aa12.96□□□□□ -0.34
PPP4R3A-206ENST00000554943 HFE2Q6ZVN8 426 aa12.96□□□□□ -0.34
PPP4R3A-206ENST00000554943 ALYREFQ86V81 257 aaKnown RBP12.96□□□□□ -0.34
PPP4R3A-206ENST00000554943 MYLK4Q86YV6 388 aaPredicted RBP12.96□□□□□ -0.34
PPP4R3A-206ENST00000554943 FATE1Q969F0 183 aa12.96□□□□□ -0.34
PPP4R3A-206ENST00000554943 E2F7Q96AV8 911 aa12.96□□□□□ -0.34
PPP4R3A-206ENST00000554943 ZNF333Q96JL9 665 aa12.96□□□□□ -0.34
PPP4R3A-206ENST00000554943 DCLRE1BQ9H816 532 aa12.96□□□□□ -0.34
PPP4R3A-206ENST00000554943 XPNPEP3Q9NQH7 507 aa12.96□□□□□ -0.34
PPP4R3A-206ENST00000554943 OSER1Q9NX31 292 aa12.96□□□□□ -0.34
PPP4R3A-206ENST00000554943 ZNF106Q9H2Y7 1883 aaKnown RBP12.96□□□□□ -0.34
PPP4R3A-206ENST00000554943 WDR27A2RRH5 827 aa12.95□□□□□ -0.34
PPP4R3A-206ENST00000554943 GLTPD2A6NH11 291 aa12.95□□□□□ -0.34
PPP4R3A-206ENST00000554943 LMNAP02545 664 aaKnown RBP12.95□□□□□ -0.34
PPP4R3A-206ENST00000554943 CACNA2D1P54289 1103 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms