RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 PPEF2O14830 753 aa4.53□□□□□ -1.68
SCFD1-214ENST00000554819 TLR2O60603 784 aa4.53□□□□□ -1.68
SCFD1-214ENST00000554819 MOSPD3O75425 235 aa4.53□□□□□ -1.68
SCFD1-214ENST00000554819 ACTL6BO94805 426 aa4.53□□□□□ -1.68
SCFD1-214ENST00000554819 TOP3BO95985 862 aaKnown RBP4.53□□□□□ -1.68
SCFD1-214ENST00000554819 CYP3A4P08684 503 aa4.53□□□□□ -1.68
SCFD1-214ENST00000554819 ST6GAL1P15907 406 aa4.53□□□□□ -1.68
SCFD1-214ENST00000554819 PTGER1P34995 402 aa4.53□□□□□ -1.68
SCFD1-214ENST00000554819 SOX2P48431 317 aa4.53□□□□□ -1.68
SCFD1-214ENST00000554819 SLC37A1P57057 533 aa4.53□□□□□ -1.68
SCFD1-214ENST00000554819 RPL15P61313 204 aaKnown RBP4.53□□□□□ -1.68
SCFD1-214ENST00000554819 AP2B1P63010 937 aa4.53□□□□□ -1.68
SCFD1-214ENST00000554819 FOXO1Q12778 655 aa4.53□□□□□ -1.68
SCFD1-214ENST00000554819 SF3A3Q12874 501 aaKnown RBP eCLIP4.53□□□□□ -1.68
SCFD1-214ENST00000554819 ETFDHQ16134 617 aa4.53□□□□□ -1.68
SCFD1-214ENST00000554819 PDCD2Q16342 344 aaPredicted RBP4.53□□□□□ -1.68
SCFD1-214ENST00000554819 TBRG1Q3YBR2 411 aa4.53□□□□□ -1.68
SCFD1-214ENST00000554819 C10orf25Q5T742 122 aa4.53□□□□□ -1.68
SCFD1-214ENST00000554819 NFRKBQ6P4R8 1299 aa4.53□□□□□ -1.68
SCFD1-214ENST00000554819 FAM57BQ71RH2 274 aa4.53□□□□□ -1.68
SCFD1-214ENST00000554819 RAB11FIP2Q7L804 512 aa4.53□□□□□ -1.68
SCFD1-214ENST00000554819 ANKRD13BQ86YJ7 626 aa4.53□□□□□ -1.68
SCFD1-214ENST00000554819 SLC44A2Q8IWA5 706 aaPredicted RBP4.53□□□□□ -1.68
SCFD1-214ENST00000554819 NANOGP1Q8N7R0 232 aa4.53□□□□□ -1.68
SCFD1-214ENST00000554819 TRMT61AQ96FX7 289 aaKnown RBP4.53□□□□□ -1.68
SCFD1-214ENST00000554819 ABHD14AQ9BUJ0 271 aa4.53□□□□□ -1.68
SCFD1-214ENST00000554819 BRD8Q9H0E9 1235 aa4.53□□□□□ -1.68
SCFD1-214ENST00000554819 TMEM184CQ9NVA4 438 aa4.53□□□□□ -1.68
SCFD1-214ENST00000554819 ZMYM2Q9UBW7 1377 aa4.53□□□□□ -1.69
SCFD1-214ENST00000554819 CYP3A7-CYP3A51PA0A087WV96 503 aa4.52□□□□□ -1.69
SCFD1-214ENST00000554819 SLC22A23A1A5C7 686 aa4.52□□□□□ -1.69
SCFD1-214ENST00000554819 FAM90A18PA6NE21 464 aa4.52□□□□□ -1.69
SCFD1-214ENST00000554819 FAM90A16PA6NEW6 464 aa4.52□□□□□ -1.69
SCFD1-214ENST00000554819 C2CD4BA6NLJ0 364 aa4.52□□□□□ -1.69
SCFD1-214ENST00000554819 FAM90A9PA6NNJ1 464 aa4.52□□□□□ -1.69
SCFD1-214ENST00000554819 FAM90A5PA8MXJ8 464 aa4.52□□□□□ -1.69
SCFD1-214ENST00000554819 M0QYT0 321 aa4.52□□□□□ -1.69
SCFD1-214ENST00000554819 TRIM38O00635 465 aa4.52□□□□□ -1.69
SCFD1-214ENST00000554819 PPP6R2O75170 966 aa4.52□□□□□ -1.69
SCFD1-214ENST00000554819 CNOT3O75175 753 aaKnown RBP4.52□□□□□ -1.69
SCFD1-214ENST00000554819 RFPL3SP0C7P2 107 aa4.52□□□□□ -1.69
SCFD1-214ENST00000554819 FAM90A15PP0C7V4 464 aa4.52□□□□□ -1.69
SCFD1-214ENST00000554819 FAM90A14PP0C7W9 464 aa4.52□□□□□ -1.69
SCFD1-214ENST00000554819 IGFBP2P18065 325 aa4.52□□□□□ -1.69
SCFD1-214ENST00000554819 TGM2P21980 687 aa4.52□□□□□ -1.69
SCFD1-214ENST00000554819 CYP3A7P24462 503 aa4.52□□□□□ -1.69
SCFD1-214ENST00000554819 LMO1P25800 156 aa4.52□□□□□ -1.69
SCFD1-214ENST00000554819 HOXD9P28356 352 aaPredicted RBP4.52□□□□□ -1.69
SCFD1-214ENST00000554819 TRIM14Q14142 442 aa4.52□□□□□ -1.69
SCFD1-214ENST00000554819 RPS6KA2Q15349 733 aa4.52□□□□□ -1.69
SCFD1-214ENST00000554819 BTBD16Q32M84 506 aa4.52□□□□□ -1.69
SCFD1-214ENST00000554819 LIPMQ5VYY2 423 aa4.52□□□□□ -1.69
SCFD1-214ENST00000554819 PAPD7Q5XG87 772 aaKnown RBP4.52□□□□□ -1.69
SCFD1-214ENST00000554819 SHC4Q6S5L8 630 aa4.52□□□□□ -1.69
SCFD1-214ENST00000554819 RHPN2Q8IUC4 686 aa4.52□□□□□ -1.69
SCFD1-214ENST00000554819 ADGRF4Q8IZF3 695 aa4.52□□□□□ -1.69
SCFD1-214ENST00000554819 CPT1BQ92523 772 aa4.52□□□□□ -1.69
SCFD1-214ENST00000554819 TUBB6Q9BUF5 446 aa4.52□□□□□ -1.69
SCFD1-214ENST00000554819 HTATIP2Q9BUP3 242 aa4.52□□□□□ -1.69
SCFD1-214ENST00000554819 MLXIPLQ9NP71 852 aa4.52□□□□□ -1.69
SCFD1-214ENST00000554819 PRDM8Q9NQV8 689 aa4.52□□□□□ -1.69
SCFD1-214ENST00000554819 TMEM45AQ9NWC5 275 aa4.52□□□□□ -1.69
SCFD1-214ENST00000554819 MTMR4Q9NYA4 1195 aa4.52□□□□□ -1.69
SCFD1-214ENST00000554819 RAB21Q9UL25 225 aa4.52□□□□□ -1.69
SCFD1-214ENST00000554819 TRPC5Q9UL62 973 aaPredicted RBP4.52□□□□□ -1.69
SCFD1-214ENST00000554819 ZNF335Q9H4Z2 1342 aaPredicted RBP4.51□□□□□ -1.69
SCFD1-214ENST00000554819 hCG_1642624A0A1W2PR95 340 aa4.51□□□□□ -1.69
SCFD1-214ENST00000554819 MBD3L5A6NJ08 208 aaPredicted RBP4.51□□□□□ -1.69
SCFD1-214ENST00000554819 SLC38A8A6NNN8 435 aa4.51□□□□□ -1.69
SCFD1-214ENST00000554819 F8W810 466 aa4.51□□□□□ -1.69
SCFD1-214ENST00000554819 ACKR2O00590 384 aa4.51□□□□□ -1.69
SCFD1-214ENST00000554819 ADAM10O14672 748 aa4.51□□□□□ -1.69
SCFD1-214ENST00000554819 PRPF4O43172 522 aaKnown RBP eCLIP4.51□□□□□ -1.69
SCFD1-214ENST00000554819 CNTN5O94779 1100 aa4.51□□□□□ -1.69
SCFD1-214ENST00000554819 KAT7O95251 611 aa4.51□□□□□ -1.69
SCFD1-214ENST00000554819 LDHAP00338 332 aaKnown RBP4.51□□□□□ -1.69
SCFD1-214ENST00000554819 TMEM191BP0C7N4 346 aa4.51□□□□□ -1.69
SCFD1-214ENST00000554819 GYS1P13807 737 aa4.51□□□□□ -1.69
SCFD1-214ENST00000554819 FOXL2P58012 376 aa4.51□□□□□ -1.69
SCFD1-214ENST00000554819 TAS2R50P59544 299 aa4.51□□□□□ -1.69
SCFD1-214ENST00000554819 RNASELQ05823 741 aaKnown RBP4.51□□□□□ -1.69
SCFD1-214ENST00000554819 RABEP1Q15276 862 aa4.51□□□□□ -1.69
SCFD1-214ENST00000554819 RBMS2Q15434 407 aaKnown RBP4.51□□□□□ -1.69
SCFD1-214ENST00000554819 TANGO2Q6ICL3 276 aa4.51□□□□□ -1.69
SCFD1-214ENST00000554819 ZNF474Q6S9Z5 364 aaPredicted RBP4.51□□□□□ -1.69
SCFD1-214ENST00000554819 CACNA2D3Q8IZS8 1091 aa4.51□□□□□ -1.69
SCFD1-214ENST00000554819 OR1N1Q8NGS0 311 aa4.51□□□□□ -1.69
SCFD1-214ENST00000554819 ZFPM2Q8WW38 1151 aa4.51□□□□□ -1.69
SCFD1-214ENST00000554819 PAGR1Q9BTK6 254 aa4.51□□□□□ -1.69
SCFD1-214ENST00000554819 MECRQ9BV79 373 aa4.51□□□□□ -1.69
SCFD1-214ENST00000554819 SCNM1Q9BWG6 230 aa4.51□□□□□ -1.69
SCFD1-214ENST00000554819 TMEM120AQ9BXJ8 343 aa4.51□□□□□ -1.69
SCFD1-214ENST00000554819 PABPC3Q9H361 631 aaKnown RBP4.51□□□□□ -1.69
SCFD1-214ENST00000554819 ELAC1Q9H777 363 aaKnown RBP4.51□□□□□ -1.69
SCFD1-214ENST00000554819 MLXIPQ9HAP2 919 aa4.51□□□□□ -1.69
SCFD1-214ENST00000554819 MOV10Q9HCE1 1003 aaKnown RBP4.51□□□□□ -1.69
SCFD1-214ENST00000554819 PAPOLBQ9NRJ5 636 aaKnown RBP4.51□□□□□ -1.69
SCFD1-214ENST00000554819 ELOVL5Q9NYP7 299 aa4.51□□□□□ -1.69
SCFD1-214ENST00000554819 NDUFAF4Q9P032 175 aa4.51□□□□□ -1.69
SCFD1-214ENST00000554819 C19orf53Q9UNZ5 99 aaPredicted RBP4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms