RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 TRIM63Q969Q1 353 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 EID2BQ96D98 161 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 RSPRY1Q96DX4 576 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 PBKQ96KB5 322 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 SCLT1Q96NL6 688 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 MACROD1Q9BQ69 325 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 SH2D3AQ9BRG2 576 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 PAGR1Q9BTK6 254 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 DPCDQ9BVM2 203 aaPredicted RBP1.76□□□□□ -2.13
PRPF39-208ENST00000554785 SLC29A3Q9BZD2 475 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 MYLK2Q9H1R3 596 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 MAGEH1Q9H213 219 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 EPS8L2Q9H6S3 715 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 TRIM36Q9NQ86 728 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 HELLSQ9NRZ9 838 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 SERTAD4Q9NUC0 356 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 GRHPRQ9UBQ7 328 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 NKX1-2Q9UD57 310 aaPredicted RBP1.76□□□□□ -2.13
PRPF39-208ENST00000554785 STEAP1Q9UHE8 339 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 RIMKLBQ9ULI2 386 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 SCAF8Q9UPN6 1271 aaKnown RBP1.76□□□□□ -2.13
PRPF39-208ENST00000554785 SLC27A6Q9Y2P4 619 aa1.76□□□□□ -2.13
PRPF39-208ENST00000554785 RANBP2P49792 3224 aaKnown RBP1.76□□□□□ -2.13
PRPF39-208ENST00000554785 THSD7AQ9UPZ6 1657 aa1.75□□□□□ -2.13
PRPF39-208ENST00000554785 COL15A1P39059 1388 aa1.75□□□□□ -2.13
PRPF39-208ENST00000554785 TUBGCP6Q96RT7 1819 aa1.75□□□□□ -2.13
PRPF39-208ENST00000554785 TARM1B6A8C7 271 aa1.75□□□□□ -2.13
PRPF39-208ENST00000554785 ACKR2O00590 384 aa1.75□□□□□ -2.13
PRPF39-208ENST00000554785 TRIM38O00635 465 aa1.75□□□□□ -2.13
PRPF39-208ENST00000554785 TP73O15350 636 aa1.75□□□□□ -2.13
PRPF39-208ENST00000554785 CREB3O43889 395 aa1.75□□□□□ -2.13
PRPF39-208ENST00000554785 USP1O94782 785 aa1.75□□□□□ -2.13
PRPF39-208ENST00000554785 LATS1O95835 1130 aa1.75□□□□□ -2.13
PRPF39-208ENST00000554785 PRKCGP05129 697 aa1.75□□□□□ -2.13
PRPF39-208ENST00000554785 PRKCBP05771 671 aa1.75□□□□□ -2.13
PRPF39-208ENST00000554785 ANXA6P08133 673 aa1.75□□□□□ -2.13
PRPF39-208ENST00000554785 IL6RP08887 468 aaPredicted RBP1.75□□□□□ -2.13
PRPF39-208ENST00000554785 DLDP09622 509 aaKnown RBP1.75□□□□□ -2.13
PRPF39-208ENST00000554785 PPM1FP49593 454 aaPredicted RBP1.75□□□□□ -2.13
PRPF39-208ENST00000554785 ZNF81P51508 661 aa1.75□□□□□ -2.13
PRPF39-208ENST00000554785 ALDH18A1P54886 795 aaKnown RBP1.75□□□□□ -2.13
PRPF39-208ENST00000554785 POLE2P56282 527 aa1.75□□□□□ -2.13
PRPF39-208ENST00000554785 FOXO1Q12778 655 aa1.75□□□□□ -2.13
PRPF39-208ENST00000554785 FHL3Q13643 280 aa1.75□□□□□ -2.13
PRPF39-208ENST00000554785 TRIM71Q2Q1W2 868 aaKnown RBP1.75□□□□□ -2.13
PRPF39-208ENST00000554785 PLAC9Q5JTB6 97 aa1.75□□□□□ -2.13
PRPF39-208ENST00000554785 LCE1AQ5T7P2 110 aa1.75□□□□□ -2.13
PRPF39-208ENST00000554785 ZNF425Q6IV72 752 aa1.75□□□□□ -2.13
PRPF39-208ENST00000554785 LDHAL6AQ6ZMR3 332 aa1.75□□□□□ -2.13
PRPF39-208ENST00000554785 ZNF551Q7Z340 670 aaPredicted RBP1.75□□□□□ -2.13
PRPF39-208ENST00000554785 LRRC71Q8N4P6 559 aa1.75□□□□□ -2.13
PRPF39-208ENST00000554785 METTL25Q8N6Q8 603 aa1.75□□□□□ -2.13
PRPF39-208ENST00000554785 SEMA6DQ8NFY4 1073 aa1.75□□□□□ -2.13
PRPF39-208ENST00000554785 SUN3Q8TAQ9 357 aa1.75□□□□□ -2.13
PRPF39-208ENST00000554785 TBC1D20Q96BZ9 403 aa1.75□□□□□ -2.13
PRPF39-208ENST00000554785 KATNAL1Q9BW62 490 aa1.75□□□□□ -2.13
PRPF39-208ENST00000554785 SORBS1Q9BX66 1292 aaKnown RBP1.75□□□□□ -2.13
PRPF39-208ENST00000554785 TMEM120AQ9BXJ8 343 aa1.75□□□□□ -2.13
PRPF39-208ENST00000554785 ARHGEF3Q9NR81 526 aa1.75□□□□□ -2.13
PRPF39-208ENST00000554785 HERC5Q9UII4 1024 aaKnown RBP1.75□□□□□ -2.13
PRPF39-208ENST00000554785 CCNL1Q9UK58 526 aaPredicted RBP1.75□□□□□ -2.13
PRPF39-208ENST00000554785 WNT6Q9Y6F9 365 aa1.75□□□□□ -2.13
PRPF39-208ENST00000554785 ERBINQ96RT1 1412 aa1.75□□□□□ -2.13
PRPF39-208ENST00000554785 KIF1BO60333 1816 aa1.75□□□□□ -2.13
PRPF39-208ENST00000554785 PARP4Q9UKK3 1724 aaKnown RBP1.75□□□□□ -2.13
PRPF39-208ENST00000554785 PLEKHH1Q9ULM0 1364 aa1.75□□□□□ -2.13
PRPF39-208ENST00000554785 LRRC37A3O60309 1634 aa1.75□□□□□ -2.13
PRPF39-208ENST00000554785 LAMC1P11047 1609 aa1.75□□□□□ -2.13
PRPF39-208ENST00000554785 PNMA6EA0A0J9YXQ4 647 aa1.75□□□□□ -2.13
PRPF39-208ENST00000554785 LINC01548A6NM66 108 aa1.75□□□□□ -2.13
PRPF39-208ENST00000554785 TISP43B9A030 160 aa1.75□□□□□ -2.13
PRPF39-208ENST00000554785 H0YIZ8 118 aa1.75□□□□□ -2.13
PRPF39-208ENST00000554785 J3KTA2 159 aa1.75□□□□□ -2.13
PRPF39-208ENST00000554785 M0R3H8 397 aa1.75□□□□□ -2.13
PRPF39-208ENST00000554785 FCHO1O14526 889 aa1.75□□□□□ -2.13
PRPF39-208ENST00000554785 PCDH17O14917 1159 aa1.75□□□□□ -2.13
PRPF39-208ENST00000554785 DNPH1O43598 174 aa1.75□□□□□ -2.13
PRPF39-208ENST00000554785 ORC4O43929 436 aa1.75□□□□□ -2.13
PRPF39-208ENST00000554785 PMPCBO75439 489 aa1.75□□□□□ -2.13
PRPF39-208ENST00000554785 WDR47O94967 919 aa1.75□□□□□ -2.13
PRPF39-208ENST00000554785 TTLL1O95922 423 aa1.75□□□□□ -2.13
PRPF39-208ENST00000554785 ITGA2BP08514 1039 aa1.75□□□□□ -2.13
PRPF39-208ENST00000554785 CBSLP0DN79 551 aa1.75□□□□□ -2.13
PRPF39-208ENST00000554785 NDUFB7P17568 137 aa1.75□□□□□ -2.13
PRPF39-208ENST00000554785 MPGP29372 298 aa1.75□□□□□ -2.13
PRPF39-208ENST00000554785 GKP32189 559 aa1.75□□□□□ -2.13
PRPF39-208ENST00000554785 HTR7P34969 479 aa1.75□□□□□ -2.13
PRPF39-208ENST00000554785 CBSP35520 551 aa1.75□□□□□ -2.13
PRPF39-208ENST00000554785 TPTEP56180 551 aa1.75□□□□□ -2.13
PRPF39-208ENST00000554785 EIF4A1P60842 406 aaKnown RBP1.75□□□□□ -2.13
PRPF39-208ENST00000554785 SUMO2P61956 95 aaKnown RBP1.75□□□□□ -2.13
PRPF39-208ENST00000554785 SSBP2P81877 361 aaPredicted RBP1.75□□□□□ -2.13
PRPF39-208ENST00000554785 RAPGEF1Q13905 1077 aa1.75□□□□□ -2.13
PRPF39-208ENST00000554785 PRKG1Q13976 671 aa1.75□□□□□ -2.13
PRPF39-208ENST00000554785 POSTNQ15063 836 aa1.75□□□□□ -2.13
PRPF39-208ENST00000554785 ACOX1Q15067 660 aa1.75□□□□□ -2.13
PRPF39-208ENST00000554785 PROSER3Q2NL68 480 aa1.75□□□□□ -2.13
PRPF39-208ENST00000554785 TMEM95Q3KNT9 176 aa1.75□□□□□ -2.13
PRPF39-208ENST00000554785 KLHL17Q6TDP4 642 aa1.75□□□□□ -2.13
PRPF39-208ENST00000554785 DPY19L3Q6ZPD9 716 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms