RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 STAP1Q9ULZ2 295 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 NCOA1Q15788 1441 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 CACNA1SQ13698 1873 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 LOC100506127A0A0U1RQW1 187 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 PDE9AO76083 593 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 ITGB3P05106 788 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 MMEP08473 750 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 RYKP34925 604 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 CNTN1Q12860 1018 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 TRIM61Q5EBN2 209 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 FGD3Q5JSP0 725 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 ZBTB49Q6ZSB9 765 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 PARP9Q8IXQ6 854 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 KLHL23Q8NBE8 558 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 NPHS2Q9NP85 383 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 KLC4Q9NSK0 619 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 ASNSD1Q9NWL6 643 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 PSD3Q9NYI0 1048 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 ZSWIM5Q9P217 1185 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 STOX2Q9P2F5 926 aaPredicted RBP3.38□□□□□ -1.87
SYNE2-212ENST00000554584 BANF1O75531 89 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 FGGP02679 453 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 POU4F1Q01851 419 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 DAW1Q8N136 415 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 PCDH12Q9NPG4 1184 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 PRR36Q9H6K5 1346 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 FOXO6A8MYZ6 492 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 VPS26AO75436 327 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 CHRM1P11229 460 aaPredicted RBP3.38□□□□□ -1.87
SYNE2-212ENST00000554584 MAPKAPK2P49137 400 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 CDH11P55287 796 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 OGFRL1Q5TC84 451 aaPredicted RBP3.38□□□□□ -1.87
SYNE2-212ENST00000554584 KRT73Q86Y46 540 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 CBWD2Q8IUF1 395 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 UBE2J2Q8N2K1 259 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 USP13Q92995 863 aaPredicted RBP3.38□□□□□ -1.87
SYNE2-212ENST00000554584 EXOC4Q96A65 974 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 GCOM2Q9BZD3 368 aaPredicted RBP3.38□□□□□ -1.87
SYNE2-212ENST00000554584 SEMA6AQ9H2E6 1030 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 EQTNQ9NQ60 294 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 HCN2Q9UL51 889 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 CCDC141Q6ZP82 1450 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 PDHXO00330 501 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 ATP5HO75947 161 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 PCCBP05166 539 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 CDC27P30260 824 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 TARBP2Q15633 366 aaKnown RBP3.38□□□□□ -1.87
SYNE2-212ENST00000554584 DPCR1Q3MIW9 517 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 WDR72Q3MJ13 1102 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 LRRC37A5PQ49AS3 106 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 ANO5Q75V66 913 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 GALNT10Q86SR1 603 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 SRBD1Q8N5C6 995 aaKnown RBP3.38□□□□□ -1.87
SYNE2-212ENST00000554584 LRRC39Q96DD0 335 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 ZMYND12Q9H0C1 365 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 FAM234AQ9H0X4 552 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 SLC9A2Q9UBY0 812 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 DMGDHQ9UI17 866 aaKnown RBP3.38□□□□□ -1.87
SYNE2-212ENST00000554584 COL4A3BPQ9Y5P4 624 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 MYO7BQ6PIF6 2116 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 TRIM13O60858 407 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 SCGB1D2O95969 90 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 KCNA5P22460 613 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 MAPK7Q13164 816 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 LTC4SQ16873 150 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 NKAPLQ5M9Q1 402 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 GDF6Q6KF10 455 aaPredicted RBP3.38□□□□□ -1.87
SYNE2-212ENST00000554584 SDR16C5Q8N3Y7 309 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 NSUN6Q8TEA1 469 aaKnown RBP3.38□□□□□ -1.87
SYNE2-212ENST00000554584 FAM172AQ8WUF8 416 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 C5orf34Q96MH7 638 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 PDGFCQ9NRA1 345 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 EMILIN3Q9NT22 766 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 FBXO40Q9UH90 709 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 RPH3ALQ9UNE2 315 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 CACNB4O00305 520 aaPredicted RBP3.38□□□□□ -1.87
SYNE2-212ENST00000554584 RNASEH1O60930 286 aaKnown RBP3.38□□□□□ -1.87
SYNE2-212ENST00000554584 RGS9O75916 674 aaPredicted RBP3.38□□□□□ -1.87
SYNE2-212ENST00000554584 URODP06132 367 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 SEPHS1P49903 392 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 BNC1Q01954 994 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 MTHFD1LQ6UB35 978 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 CACTIN-AS1Q8N1I8 211 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 WDR36Q8NI36 951 aaKnown RBP3.38□□□□□ -1.87
SYNE2-212ENST00000554584 ASAP3Q8TDY4 903 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 RNFT2Q96EX2 444 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 FERD3LQ96RJ6 166 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 HIF1ANQ9NWT6 349 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 NR2E1Q9Y466 385 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 HEMK1Q9Y5R4 338 aaPredicted RBP3.38□□□□□ -1.87
SYNE2-212ENST00000554584 COL15A1P39059 1388 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 PLGP00747 810 aaPredicted RBP3.38□□□□□ -1.87
SYNE2-212ENST00000554584 TPP2P29144 1249 aaPredicted RBP3.38□□□□□ -1.87
SYNE2-212ENST00000554584 SPIRE1Q08AE8 756 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 PRKAA1Q13131 559 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 DCAF6Q58WW2 860 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 CARD16Q5EG05 197 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 SNX30Q5VWJ9 437 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 TXNRD3Q86VQ6 643 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 KRT84Q9NSB2 600 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms