RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 SIPA1Q96FS4 1042 aa8.09□□□□□ -1.11
ABCD4-220ENST00000553998 WBP1Q96G27 269 aa8.09□□□□□ -1.11
ABCD4-220ENST00000553998 TNIP3Q96KP6 325 aa8.09□□□□□ -1.11
ABCD4-220ENST00000553998 CRACR2AQ9BSW2 395 aa8.09□□□□□ -1.11
ABCD4-220ENST00000553998 SMYD3Q9H7B4 428 aa8.09□□□□□ -1.11
ABCD4-220ENST00000553998 CSNK1G1Q9HCP0 422 aa8.09□□□□□ -1.11
ABCD4-220ENST00000553998 PLCB1Q9NQ66 1216 aa8.09□□□□□ -1.11
ABCD4-220ENST00000553998 RTN4Q9NQC3 1192 aaKnown RBP8.09□□□□□ -1.11
ABCD4-220ENST00000553998 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.09□□□□□ -1.11
ABCD4-220ENST00000553998 GMIPQ9P107 970 aa8.09□□□□□ -1.11
ABCD4-220ENST00000553998 EIF2B4Q9UI10 523 aaKnown RBP8.09□□□□□ -1.11
ABCD4-220ENST00000553998 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.09□□□□□ -1.11
ABCD4-220ENST00000553998 CEP192Q8TEP8 1941 aa8.08□□□□□ -1.12
ABCD4-220ENST00000553998 TEX51A0A1B0GUA7 166 aa8.08□□□□□ -1.12
ABCD4-220ENST00000553998 A0A1W2PQC6 194 aa8.08□□□□□ -1.12
ABCD4-220ENST00000553998 FAM149AA5PLN7 773 aa8.08□□□□□ -1.12
ABCD4-220ENST00000553998 A8MXQ7 604 aa8.08□□□□□ -1.12
ABCD4-220ENST00000553998 PLK4O00444 970 aa8.08□□□□□ -1.12
ABCD4-220ENST00000553998 CAPN9O14815 690 aa8.08□□□□□ -1.12
ABCD4-220ENST00000553998 TLX3O43711 291 aaPredicted RBP8.08□□□□□ -1.12
ABCD4-220ENST00000553998 DFNA5O60443 496 aa8.08□□□□□ -1.12
ABCD4-220ENST00000553998 TLR5O60602 858 aa8.08□□□□□ -1.12
ABCD4-220ENST00000553998 TPM3P06753 285 aa8.08□□□□□ -1.12
ABCD4-220ENST00000553998 ATP5C1P36542 298 aaKnown RBP8.08□□□□□ -1.12
ABCD4-220ENST00000553998 IL12RB1P42701 662 aa8.08□□□□□ -1.12
ABCD4-220ENST00000553998 CTSKP43235 329 aa8.08□□□□□ -1.12
ABCD4-220ENST00000553998 MFAP3P55082 362 aa8.08□□□□□ -1.12
ABCD4-220ENST00000553998 FANCCQ00597 558 aa8.08□□□□□ -1.12
ABCD4-220ENST00000553998 UBXN1Q04323 297 aa8.08□□□□□ -1.12
ABCD4-220ENST00000553998 LRMPQ12912 555 aa8.08□□□□□ -1.12
ABCD4-220ENST00000553998 DHRS13Q6UX07 377 aa8.08□□□□□ -1.12
ABCD4-220ENST00000553998 SCARA5Q6ZMJ2 495 aa8.08□□□□□ -1.12
ABCD4-220ENST00000553998 TPGS1Q6ZTW0 290 aa8.08□□□□□ -1.12
ABCD4-220ENST00000553998 CRYBG2Q8N1P7 616 aa8.08□□□□□ -1.12
ABCD4-220ENST00000553998 PPM1KQ8N3J5 372 aa8.08□□□□□ -1.12
ABCD4-220ENST00000553998 RNF214Q8ND24 703 aa8.08□□□□□ -1.12
ABCD4-220ENST00000553998 ZMIZ2Q8NF64 920 aa8.08□□□□□ -1.12
ABCD4-220ENST00000553998 SNIP1Q8TAD8 396 aaKnown RBP8.08□□□□□ -1.12
ABCD4-220ENST00000553998 PIP4K2CQ8TBX8 421 aa8.08□□□□□ -1.12
ABCD4-220ENST00000553998 PRCCQ92733 491 aaPredicted RBP8.08□□□□□ -1.12
ABCD4-220ENST00000553998 TATDN2Q93075 761 aa8.08□□□□□ -1.12
ABCD4-220ENST00000553998 NXPE2Q96DL1 559 aa8.08□□□□□ -1.12
ABCD4-220ENST00000553998 PIWIL1Q96J94 861 aaKnown RBP8.08□□□□□ -1.12
ABCD4-220ENST00000553998 ERGIC2Q96RQ1 377 aa8.08□□□□□ -1.12
ABCD4-220ENST00000553998 ORAI3Q9BRQ5 295 aa8.08□□□□□ -1.12
ABCD4-220ENST00000553998 NT5C1AQ9BXI3 368 aa8.08□□□□□ -1.12
ABCD4-220ENST00000553998 NRSN2Q9GZP1 204 aa8.08□□□□□ -1.12
ABCD4-220ENST00000553998 SDCBP2Q9H190 292 aa8.08□□□□□ -1.12
ABCD4-220ENST00000553998 MIR1-1HGQ9H1L0 117 aa8.08□□□□□ -1.12
ABCD4-220ENST00000553998 FBXO44Q9H4M3 255 aa8.08□□□□□ -1.12
ABCD4-220ENST00000553998 DMAP1Q9NPF5 467 aaPredicted RBP8.08□□□□□ -1.12
ABCD4-220ENST00000553998 APEX2Q9UBZ4 518 aa8.08□□□□□ -1.12
ABCD4-220ENST00000553998 LSM7Q9UK45 103 aaKnown RBP8.08□□□□□ -1.12
ABCD4-220ENST00000553998 ANKRD6Q9Y2G4 727 aa8.08□□□□□ -1.12
ABCD4-220ENST00000553998 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.08□□□□□ -1.12
ABCD4-220ENST00000553998 SNX11Q9Y5W9 270 aa8.08□□□□□ -1.12
ABCD4-220ENST00000553998 SLCO1B1Q9Y6L6 691 aa8.08□□□□□ -1.12
ABCD4-220ENST00000553998 ADAMTS9Q9P2N4 1935 aa8.07□□□□□ -1.12
ABCD4-220ENST00000553998 ATMQ13315 3056 aa8.07□□□□□ -1.12
ABCD4-220ENST00000553998 C10orf142B7Z368 130 aa8.07□□□□□ -1.12
ABCD4-220ENST00000553998 J3QKU1 62 aa8.07□□□□□ -1.12
ABCD4-220ENST00000553998 RRP8O43159 456 aaKnown RBP8.07□□□□□ -1.12
ABCD4-220ENST00000553998 CBFA2T2O43439 604 aa8.07□□□□□ -1.12
ABCD4-220ENST00000553998 TIMM44O43615 452 aa8.07□□□□□ -1.12
ABCD4-220ENST00000553998 TSPAN3O60637 253 aa8.07□□□□□ -1.12
ABCD4-220ENST00000553998 TBX18O95935 607 aa8.07□□□□□ -1.12
ABCD4-220ENST00000553998 IRF1P10914 325 aa8.07□□□□□ -1.12
ABCD4-220ENST00000553998 SLC9A1P19634 815 aa8.07□□□□□ -1.12
ABCD4-220ENST00000553998 PLA2G4AP47712 749 aa8.07□□□□□ -1.12
ABCD4-220ENST00000553998 CCT8P50990 548 aa8.07□□□□□ -1.12
ABCD4-220ENST00000553998 NDST1P52848 882 aa8.07□□□□□ -1.12
ABCD4-220ENST00000553998 CDH8P55286 799 aa8.07□□□□□ -1.12
ABCD4-220ENST00000553998 UBASH3AP57075 661 aa8.07□□□□□ -1.12
ABCD4-220ENST00000553998 KCNMA1Q12791 1236 aa8.07□□□□□ -1.12
ABCD4-220ENST00000553998 IFRD2Q12894 506 aaPredicted RBP8.07□□□□□ -1.12
ABCD4-220ENST00000553998 NR1I3Q14994 352 aa8.07□□□□□ -1.12
ABCD4-220ENST00000553998 EIF4HQ15056 248 aaKnown RBP8.07□□□□□ -1.12
ABCD4-220ENST00000553998 SYCP1Q15431 976 aa8.07□□□□□ -1.12
ABCD4-220ENST00000553998 TEAD4Q15561 434 aa8.07□□□□□ -1.12
ABCD4-220ENST00000553998 GEN1Q17RS7 908 aa8.07□□□□□ -1.12
ABCD4-220ENST00000553998 C6orf118Q5T5N4 469 aa8.07□□□□□ -1.12
ABCD4-220ENST00000553998 KLHDC7AQ5VTJ3 777 aa8.07□□□□□ -1.12
ABCD4-220ENST00000553998 FYB2Q5VWT5 728 aa8.07□□□□□ -1.12
ABCD4-220ENST00000553998 DPY19L2P1Q6NXN4 242 aa8.07□□□□□ -1.12
ABCD4-220ENST00000553998 SARM1Q6SZW1 724 aa8.07□□□□□ -1.12
ABCD4-220ENST00000553998 LRRC69Q6ZNQ3 347 aa8.07□□□□□ -1.12
ABCD4-220ENST00000553998 GPR155Q7Z3F1 870 aa8.07□□□□□ -1.12
ABCD4-220ENST00000553998 FAM35AQ86V20 835 aa8.07□□□□□ -1.12
ABCD4-220ENST00000553998 ARHGEF19Q8IW93 802 aa8.07□□□□□ -1.12
ABCD4-220ENST00000553998 FUKQ8N0W3 1084 aa8.07□□□□□ -1.12
ABCD4-220ENST00000553998 UBR7Q8N806 425 aa8.07□□□□□ -1.12
ABCD4-220ENST00000553998 IQCDQ96DY2 449 aa8.07□□□□□ -1.12
ABCD4-220ENST00000553998 ERLEC1Q96DZ1 483 aa8.07□□□□□ -1.12
ABCD4-220ENST00000553998 SMARCD1Q96GM5 515 aa8.07□□□□□ -1.12
ABCD4-220ENST00000553998 DCBLD2Q96PD2 775 aa8.07□□□□□ -1.12
ABCD4-220ENST00000553998 SMOQ99835 787 aa8.07□□□□□ -1.12
ABCD4-220ENST00000553998 C6orf106Q9H6K1 298 aaPredicted RBP8.07□□□□□ -1.12
ABCD4-220ENST00000553998 TM9SF3Q9HD45 589 aa8.07□□□□□ -1.12
ABCD4-220ENST00000553998 SIX2Q9NPC8 291 aa8.07□□□□□ -1.12
ABCD4-220ENST00000553998 UBE2TQ9NPD8 197 aaPredicted RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms