RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 MANEALQ5VSG8 457 aa14.98□□□□□ -0.01
SHMT2-210ENST00000553950 RFX8Q6ZV50 586 aa14.98□□□□□ -0.01
SHMT2-210ENST00000553950 BZW1Q7L1Q6 419 aaKnown RBP14.98□□□□□ -0.01
SHMT2-210ENST00000553950 DENND1CQ8IV53 801 aa14.98□□□□□ -0.01
SHMT2-210ENST00000553950 TDRD5Q8NAT2 981 aaKnown RBP14.98□□□□□ -0.01
SHMT2-210ENST00000553950 HJURPQ8NCD3 748 aaPredicted RBP14.98□□□□□ -0.01
SHMT2-210ENST00000553950 DEPDC1BQ8WUY9 529 aa14.98□□□□□ -0.01
SHMT2-210ENST00000553950 RAPGEF5Q92565 580 aa14.98□□□□□ -0.01
SHMT2-210ENST00000553950 TSC1Q92574 1164 aa14.98□□□□□ -0.01
SHMT2-210ENST00000553950 RNF25Q96BH1 459 aaPredicted RBP14.98□□□□□ -0.01
SHMT2-210ENST00000553950 RPGRIP1Q96KN7 1286 aa14.98□□□□□ -0.01
SHMT2-210ENST00000553950 CSPG4P5Q96PW8 444 aa14.98□□□□□ -0.01
SHMT2-210ENST00000553950 ZYG11BQ9C0D3 744 aa14.98□□□□□ -0.01
SHMT2-210ENST00000553950 SIK2Q9H0K1 926 aa14.98□□□□□ -0.01
SHMT2-210ENST00000553950 POMKQ9H5K3 350 aa14.98□□□□□ -0.01
SHMT2-210ENST00000553950 ZFP14Q9HCL3 533 aa14.98□□□□□ -0.01
SHMT2-210ENST00000553950 HOMER3Q9NSC5 361 aa14.98□□□□□ -0.01
SHMT2-210ENST00000553950 THG1LQ9NWX6 298 aaKnown RBP14.98□□□□□ -0.01
SHMT2-210ENST00000553950 AGO1Q9UL18 857 aaKnown RBP14.98□□□□□ -0.01
SHMT2-210ENST00000553950 NR2E1Q9Y466 385 aa14.98□□□□□ -0.01
SHMT2-210ENST00000553950 MRFAP1Q9Y605 127 aa14.98□□□□□ -0.01
SHMT2-210ENST00000553950 RAD54BQ9Y620 910 aa14.98□□□□□ -0.01
SHMT2-210ENST00000553950 IGLV3-10A0A075B6K4 115 aa14.97□□□□□ -0.01
SHMT2-210ENST00000553950 C3orf70A6NLC5 250 aaPredicted RBP14.97□□□□□ -0.01
SHMT2-210ENST00000553950 PI4K2BG5E9Z4 385 aa14.97□□□□□ -0.01
SHMT2-210ENST00000553950 APOL1O14791 398 aa14.97□□□□□ -0.01
SHMT2-210ENST00000553950 LRIG2O94898 1065 aa14.97□□□□□ -0.01
SHMT2-210ENST00000553950 EPHB2P29323 1055 aa14.97□□□□□ -0.01
SHMT2-210ENST00000553950 CXCR5P32302 372 aa14.97□□□□□ -0.01
SHMT2-210ENST00000553950 ZNF211Q13398 564 aaPredicted RBP14.97□□□□□ -0.01
SHMT2-210ENST00000553950 AUHQ13825 339 aaKnown RBP14.97□□□□□ -0.01
SHMT2-210ENST00000553950 CA9Q16790 459 aa14.97□□□□□ -0.01
SHMT2-210ENST00000553950 ATP13A4Q4VNC1 1196 aa14.97□□□□□ -0.01
SHMT2-210ENST00000553950 RAP1GAP2Q684P5 730 aa14.97□□□□□ -0.01
SHMT2-210ENST00000553950 TMCO3Q6UWJ1 677 aa14.97□□□□□ -0.01
SHMT2-210ENST00000553950 MFSD7Q6UXD7 560 aa14.97□□□□□ -0.01
SHMT2-210ENST00000553950 BBS12Q6ZW61 710 aa14.97□□□□□ -0.01
SHMT2-210ENST00000553950 SLC13A5Q86YT5 568 aaPredicted RBP14.97□□□□□ -0.01
SHMT2-210ENST00000553950 RFX6Q8HWS3 928 aa14.97□□□□□ -0.01
SHMT2-210ENST00000553950 CCDC117Q8IWD4 279 aaPredicted RBP14.97□□□□□ -0.01
SHMT2-210ENST00000553950 LZTR1Q8N653 840 aa14.97□□□□□ -0.01
SHMT2-210ENST00000553950 CEP112Q8N8E3 955 aa14.97□□□□□ -0.01
SHMT2-210ENST00000553950 BPIFB1Q8TDL5 484 aa14.97□□□□□ -0.01
SHMT2-210ENST00000553950 RPRD1AQ96P16 312 aaPredicted RBP14.97□□□□□ -0.01
SHMT2-210ENST00000553950 RNF157Q96PX1 679 aa14.97□□□□□ -0.01
SHMT2-210ENST00000553950 GKN1Q9NS71 199 aa14.97□□□□□ -0.01
SHMT2-210ENST00000553950 EPS15L1Q9UBC2 864 aa14.97□□□□□ -0.01
SHMT2-210ENST00000553950 CHD5Q8TDI0 1954 aa14.96□□□□□ -0.01
SHMT2-210ENST00000553950 A0A1B0GVM2 712 aa14.96□□□□□ -0.01
SHMT2-210ENST00000553950 TCAF2A6NFQ2 919 aa14.96□□□□□ -0.01
SHMT2-210ENST00000553950 FGGP02679 453 aa14.96□□□□□ -0.01
SHMT2-210ENST00000553950 RHOQP17081 205 aa14.96□□□□□ -0.01
SHMT2-210ENST00000553950 GOT1P17174 413 aa14.96□□□□□ -0.01
SHMT2-210ENST00000553950 IFNAR2P48551 515 aa14.96□□□□□ -0.01
SHMT2-210ENST00000553950 MAPKAPK2P49137 400 aa14.96□□□□□ -0.01
SHMT2-210ENST00000553950 DPYSQ14117 519 aa14.96□□□□□ -0.01
SHMT2-210ENST00000553950 LONRF2Q1L5Z9 754 aa14.96□□□□□ -0.01
SHMT2-210ENST00000553950 LEXMQ3ZCV2 418 aa14.96□□□□□ -0.01
SHMT2-210ENST00000553950 C5orf22Q49AR2 442 aa14.96□□□□□ -0.01
SHMT2-210ENST00000553950 FAM133BQ5BKY9 247 aaKnown RBP14.96□□□□□ -0.01
SHMT2-210ENST00000553950 ANKRD20A8PQ5CZ79 823 aa14.96□□□□□ -0.01
SHMT2-210ENST00000553950 FAM78AQ5JUQ0 283 aa14.96□□□□□ -0.01
SHMT2-210ENST00000553950 MPP7Q5T2T1 576 aa14.96□□□□□ -0.01
SHMT2-210ENST00000553950 SLC9A4Q6AI14 798 aa14.96□□□□□ -0.01
SHMT2-210ENST00000553950 RWDD4Q6NW29 188 aaKnown RBP14.96□□□□□ -0.01
SHMT2-210ENST00000553950 CHST9Q7L1S5 443 aa14.96□□□□□ -0.01
SHMT2-210ENST00000553950 ADAMTS19Q8TE59 1207 aa14.96□□□□□ -0.01
SHMT2-210ENST00000553950 ELSPBP1Q96BH3 223 aa14.96□□□□□ -0.01
SHMT2-210ENST00000553950 RUNDC3BQ96NL0 473 aa14.96□□□□□ -0.01
SHMT2-210ENST00000553950 PRMT1Q99873 361 aaKnown RBP14.96□□□□□ -0.01
SHMT2-210ENST00000553950 ANLNQ9NQW6 1124 aa14.96□□□□□ -0.01
SHMT2-210ENST00000553950 ARHGEF4Q9NR80 690 aa14.96□□□□□ -0.01
SHMT2-210ENST00000553950 CWC15Q9P013 229 aaKnown RBP14.96□□□□□ -0.01
SHMT2-210ENST00000553950 VANGL2Q9ULK5 521 aa14.96□□□□□ -0.01
SHMT2-210ENST00000553950 WASH4PA8MWX3 477 aa14.95□□□□□ -0.02
SHMT2-210ENST00000553950 H3BQ06 376 aaPredicted RBP14.95□□□□□ -0.02
SHMT2-210ENST00000553950 CCDC188H7C350 402 aa14.95□□□□□ -0.02
SHMT2-210ENST00000553950 I6L893 689 aaPredicted RBP14.95□□□□□ -0.02
SHMT2-210ENST00000553950 APOC4-APOC2K7ER74 178 aa14.95□□□□□ -0.02
SHMT2-210ENST00000553950 NRG2O14511 850 aaPredicted RBP14.95□□□□□ -0.02
SHMT2-210ENST00000553950 MBTPS2O43462 519 aa14.95□□□□□ -0.02
SHMT2-210ENST00000553950 CLDN11O75508 207 aa14.95□□□□□ -0.02
SHMT2-210ENST00000553950 ECI2O75521 394 aa14.95□□□□□ -0.02
SHMT2-210ENST00000553950 NFATC1O95644 943 aa14.95□□□□□ -0.02
SHMT2-210ENST00000553950 APOC2P02655 101 aa14.95□□□□□ -0.02
SHMT2-210ENST00000553950 KLKB1P03952 638 aa14.95□□□□□ -0.02
SHMT2-210ENST00000553950 CD48P09326 243 aa14.95□□□□□ -0.02
SHMT2-210ENST00000553950 LAMP2P13473 410 aa14.95□□□□□ -0.02
SHMT2-210ENST00000553950 ETFBP38117 255 aa14.95□□□□□ -0.02
SHMT2-210ENST00000553950 NR2C2P49116 596 aa14.95□□□□□ -0.02
SHMT2-210ENST00000553950 CDH4P55283 916 aa14.95□□□□□ -0.02
SHMT2-210ENST00000553950 OXCT1P55809 520 aa14.95□□□□□ -0.02
SHMT2-210ENST00000553950 PDGFRLQ15198 375 aa14.95□□□□□ -0.02
SHMT2-210ENST00000553950 CCDC85BQ15834 202 aaPredicted RBP14.95□□□□□ -0.02
SHMT2-210ENST00000553950 MPPE1Q53F39 396 aa14.95□□□□□ -0.02
SHMT2-210ENST00000553950 KAZNQ674X7 775 aa14.95□□□□□ -0.02
SHMT2-210ENST00000553950 NADSYN1Q6IA69 706 aa14.95□□□□□ -0.02
SHMT2-210ENST00000553950 YAF2Q8IY57 180 aa14.95□□□□□ -0.02
SHMT2-210ENST00000553950 LGI2Q8N0V4 545 aa14.95□□□□□ -0.02
SHMT2-210ENST00000553950 PYROXD2Q8N2H3 581 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms