RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 TRPV5Q9NQA5 729 aa18.65■□□□□ 0.58
PSEN1-208ENST00000553719 OR12D3Q9UGF7 316 aa18.65■□□□□ 0.58
PSEN1-208ENST00000553719 DRGXA6NNA5 263 aa18.64■□□□□ 0.57
PSEN1-208ENST00000553719 FTCDO95954 541 aa18.64■□□□□ 0.57
PSEN1-208ENST00000553719 PEX5P50542 639 aa18.64■□□□□ 0.57
PSEN1-208ENST00000553719 IRAK1P51617 712 aa18.64■□□□□ 0.57
PSEN1-208ENST00000553719 VCPP55072 806 aaKnown RBP18.64■□□□□ 0.57
PSEN1-208ENST00000553719 TNK2Q07912 1038 aa18.64■□□□□ 0.57
PSEN1-208ENST00000553719 FYB2Q5VWT5 728 aa18.64■□□□□ 0.57
PSEN1-208ENST00000553719 CHSY1Q86X52 802 aa18.64■□□□□ 0.57
PSEN1-208ENST00000553719 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.64■□□□□ 0.57
PSEN1-208ENST00000553719 YAF2Q8IY57 180 aa18.64■□□□□ 0.57
PSEN1-208ENST00000553719 UBE2Q2Q8WVN8 375 aa18.64■□□□□ 0.57
PSEN1-208ENST00000553719 IRF7Q92985 503 aa18.64■□□□□ 0.57
PSEN1-208ENST00000553719 ATP2A3Q93084 1043 aa18.64■□□□□ 0.57
PSEN1-208ENST00000553719 IGSF8Q969P0 613 aa18.64■□□□□ 0.57
PSEN1-208ENST00000553719 CHFRQ96EP1 664 aa18.64■□□□□ 0.57
PSEN1-208ENST00000553719 ALS2CR12Q96Q35 445 aa18.64■□□□□ 0.57
PSEN1-208ENST00000553719 DDX50Q9BQ39 737 aaKnown RBP18.64■□□□□ 0.57
PSEN1-208ENST00000553719 EBF3Q9H4W6 596 aa18.64■□□□□ 0.57
PSEN1-208ENST00000553719 SPHK2Q9NRA0 654 aa18.64■□□□□ 0.57
PSEN1-208ENST00000553719 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.64■□□□□ 0.57
PSEN1-208ENST00000553719 ZNF212Q9UDV6 495 aa18.64■□□□□ 0.57
PSEN1-208ENST00000553719 MYOFQ9NZM1 2061 aa18.64■□□□□ 0.57
PSEN1-208ENST00000553719 MUC3AQ02505 3323 aa18.64■□□□□ 0.57
PSEN1-208ENST00000553719 C3orf70A6NLC5 250 aaPredicted RBP18.63■□□□□ 0.57
PSEN1-208ENST00000553719 E9PAM4 449 aa18.63■□□□□ 0.57
PSEN1-208ENST00000553719 F5H5T6 163 aa18.63■□□□□ 0.57
PSEN1-208ENST00000553719 DDX3YO15523 660 aaKnown RBP18.63■□□□□ 0.57
PSEN1-208ENST00000553719 HOXC11O43248 304 aaPredicted RBP18.63■□□□□ 0.57
PSEN1-208ENST00000553719 NARSO43776 548 aaKnown RBP18.63■□□□□ 0.57
PSEN1-208ENST00000553719 LRIG2O94898 1065 aa18.63■□□□□ 0.57
PSEN1-208ENST00000553719 NFATC1O95644 943 aa18.63■□□□□ 0.57
PSEN1-208ENST00000553719 TDGQ13569 410 aa18.63■□□□□ 0.57
PSEN1-208ENST00000553719 DHCR24Q15392 516 aa18.63■□□□□ 0.57
PSEN1-208ENST00000553719 TJAP1Q5JTD0 557 aa18.63■□□□□ 0.57
PSEN1-208ENST00000553719 LY6G5CQ5SRR4 150 aa18.63■□□□□ 0.57
PSEN1-208ENST00000553719 MPP7Q5T2T1 576 aa18.63■□□□□ 0.57
PSEN1-208ENST00000553719 MEI1Q5TIA1 1274 aa18.63■□□□□ 0.57
PSEN1-208ENST00000553719 PEX26Q7Z412 305 aa18.63■□□□□ 0.57
PSEN1-208ENST00000553719 TMEM25Q86YD3 366 aa18.63■□□□□ 0.57
PSEN1-208ENST00000553719 KATNAL2Q8IYT4 538 aa18.63■□□□□ 0.57
PSEN1-208ENST00000553719 DNASE1L2Q92874 299 aa18.63■□□□□ 0.57
PSEN1-208ENST00000553719 SIK2Q9H0K1 926 aa18.63■□□□□ 0.57
PSEN1-208ENST00000553719 DHX35Q9H5Z1 703 aaKnown RBP18.63■□□□□ 0.57
PSEN1-208ENST00000553719 ECT2Q9H8V3 914 aa18.63■□□□□ 0.57
PSEN1-208ENST00000553719 PCDH18Q9HCL0 1135 aa18.63■□□□□ 0.57
PSEN1-208ENST00000553719 CD320Q9NPF0 282 aa18.63■□□□□ 0.57
PSEN1-208ENST00000553719 SLC2A4RGQ9NR83 387 aa18.63■□□□□ 0.57
PSEN1-208ENST00000553719 PPARGC1AQ9UBK2 798 aaKnown RBP18.63■□□□□ 0.57
PSEN1-208ENST00000553719 AMFRQ9UKV5 643 aa18.63■□□□□ 0.57
PSEN1-208ENST00000553719 VANGL2Q9ULK5 521 aa18.63■□□□□ 0.57
PSEN1-208ENST00000553719 PCDHA3Q9Y5H8 950 aa18.63■□□□□ 0.57
PSEN1-208ENST00000553719 TRIOO75962 3097 aa18.63■□□□□ 0.57
PSEN1-208ENST00000553719 KIAA1549LQ6ZVL6 1849 aa18.63■□□□□ 0.57
PSEN1-208ENST00000553719 CCDC66A2RUB6 948 aa18.62■□□□□ 0.57
PSEN1-208ENST00000553719 MIF4GDA9UHW6 222 aaKnown RBP18.62■□□□□ 0.57
PSEN1-208ENST00000553719 TRDMT1O14717 391 aaKnown RBP18.62■□□□□ 0.57
PSEN1-208ENST00000553719 IL4RP24394 825 aa18.62■□□□□ 0.57
PSEN1-208ENST00000553719 HOXD9P28356 352 aaPredicted RBP18.62■□□□□ 0.57
PSEN1-208ENST00000553719 HTR7P34969 479 aa18.62■□□□□ 0.57
PSEN1-208ENST00000553719 SSR1P43307 286 aaKnown RBP18.62■□□□□ 0.57
PSEN1-208ENST00000553719 ZNF135P52742 658 aaPredicted RBP18.62■□□□□ 0.57
PSEN1-208ENST00000553719 RUNX3Q13761 415 aa18.62■□□□□ 0.57
PSEN1-208ENST00000553719 TAZQ16635 292 aa18.62■□□□□ 0.57
PSEN1-208ENST00000553719 VSIG1Q86XK7 387 aa18.62■□□□□ 0.57
PSEN1-208ENST00000553719 LGI2Q8N0V4 545 aa18.62■□□□□ 0.57
PSEN1-208ENST00000553719 HJURPQ8NCD3 748 aaPredicted RBP18.62■□□□□ 0.57
PSEN1-208ENST00000553719 RAPGEF5Q92565 580 aa18.62■□□□□ 0.57
PSEN1-208ENST00000553719 HSPH1Q92598 858 aa18.62■□□□□ 0.57
PSEN1-208ENST00000553719 ALG3Q92685 438 aa18.62■□□□□ 0.57
PSEN1-208ENST00000553719 FAF2Q96CS3 445 aa18.62■□□□□ 0.57
PSEN1-208ENST00000553719 BRD9Q9H8M2 597 aa18.62■□□□□ 0.57
PSEN1-208ENST00000553719 KLHL11Q9NVR0 708 aa18.62■□□□□ 0.57
PSEN1-208ENST00000553719 GTSE1Q9NYZ3 720 aa18.62■□□□□ 0.57
PSEN1-208ENST00000553719 PACSIN2Q9UNF0 486 aaPredicted RBP18.62■□□□□ 0.57
PSEN1-208ENST00000553719 DUSP12Q9UNI6 340 aa18.62■□□□□ 0.57
PSEN1-208ENST00000553719 ZNF487B1APH4 448 aa18.61■□□□□ 0.57
PSEN1-208ENST00000553719 TSPAN3O60637 253 aa18.61■□□□□ 0.57
PSEN1-208ENST00000553719 CD48P09326 243 aa18.61■□□□□ 0.57
PSEN1-208ENST00000553719 SRFP11831 508 aa18.61■□□□□ 0.57
PSEN1-208ENST00000553719 GJC1P36383 396 aa18.61■□□□□ 0.57
PSEN1-208ENST00000553719 HCAR3P49019 387 aa18.61■□□□□ 0.57
PSEN1-208ENST00000553719 RPS24P62847 133 aaKnown RBP18.61■□□□□ 0.57
PSEN1-208ENST00000553719 DPYSQ14117 519 aa18.61■□□□□ 0.57
PSEN1-208ENST00000553719 DPYSL3Q14195 570 aa18.61■□□□□ 0.57
PSEN1-208ENST00000553719 MPPE1Q53F39 396 aa18.61■□□□□ 0.57
PSEN1-208ENST00000553719 TTC39BQ5VTQ0 682 aaPredicted RBP18.61■□□□□ 0.57
PSEN1-208ENST00000553719 ANKS1BQ7Z6G8 1248 aa18.61■□□□□ 0.57
PSEN1-208ENST00000553719 NLRP14Q86W24 1093 aa18.61■□□□□ 0.57
PSEN1-208ENST00000553719 RNF135Q8IUD6 432 aa18.61■□□□□ 0.57
PSEN1-208ENST00000553719 ETFBKMTQ8IXQ9 262 aa18.61■□□□□ 0.57
PSEN1-208ENST00000553719 EPAS1Q99814 870 aa18.61■□□□□ 0.57
PSEN1-208ENST00000553719 TLR10Q9BXR5 811 aa18.61■□□□□ 0.57
PSEN1-208ENST00000553719 DDX56Q9NY93 547 aaKnown RBP18.61■□□□□ 0.57
PSEN1-208ENST00000553719 CWC15Q9P013 229 aaKnown RBP18.61■□□□□ 0.57
PSEN1-208ENST00000553719 RCOR3Q9P2K3 495 aaPredicted RBP18.61■□□□□ 0.57
PSEN1-208ENST00000553719 SORCS3Q9UPU3 1222 aa18.61■□□□□ 0.57
PSEN1-208ENST00000553719 NCOR1O75376 2440 aa18.6■□□□□ 0.57
PSEN1-208ENST00000553719 FANCGO15287 622 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms