RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 HS3ST4Q9Y661 456 aa14.32□□□□□ -0.12
TUBB3-202ENST00000553656 COL4A3Q01955 1670 aa14.32□□□□□ -0.12
TUBB3-202ENST00000553656 A0A0C4DFX4 3053 aa14.31□□□□□ -0.12
TUBB3-202ENST00000553656 PRR33A8MZF0 331 aa14.31□□□□□ -0.12
TUBB3-202ENST00000553656 GPR37L1O60883 481 aa14.31□□□□□ -0.12
TUBB3-202ENST00000553656 PTMAP06454 111 aaKnown RBP14.31□□□□□ -0.12
TUBB3-202ENST00000553656 HOXD9P28356 352 aaPredicted RBP14.31□□□□□ -0.12
TUBB3-202ENST00000553656 ADRA1BP35368 520 aa14.31□□□□□ -0.12
TUBB3-202ENST00000553656 GGCXP38435 758 aa14.31□□□□□ -0.12
TUBB3-202ENST00000553656 GRIA2P42262 883 aa14.31□□□□□ -0.12
TUBB3-202ENST00000553656 SSR1P43307 286 aaKnown RBP14.31□□□□□ -0.12
TUBB3-202ENST00000553656 SLC6A11P48066 632 aa14.31□□□□□ -0.12
TUBB3-202ENST00000553656 RPS24P62847 133 aaKnown RBP14.31□□□□□ -0.12
TUBB3-202ENST00000553656 TMEM196Q5HYL7 178 aa14.31□□□□□ -0.12
TUBB3-202ENST00000553656 CWF19L1Q69YN2 538 aaKnown RBP14.31□□□□□ -0.12
TUBB3-202ENST00000553656 RAD9BQ6WBX8 426 aa14.31□□□□□ -0.12
TUBB3-202ENST00000553656 KIAA1328Q86T90 577 aa14.31□□□□□ -0.12
TUBB3-202ENST00000553656 C12orf40Q86WS4 652 aa14.31□□□□□ -0.12
TUBB3-202ENST00000553656 MFN1Q8IWA4 741 aa14.31□□□□□ -0.12
TUBB3-202ENST00000553656 ETFBKMTQ8IXQ9 262 aa14.31□□□□□ -0.12
TUBB3-202ENST00000553656 CFAP52Q8N1V2 620 aa14.31□□□□□ -0.12
TUBB3-202ENST00000553656 SLC35G2Q8TBE7 412 aa14.31□□□□□ -0.12
TUBB3-202ENST00000553656 C1orf74Q96LT6 269 aa14.31□□□□□ -0.12
TUBB3-202ENST00000553656 PRICKLE1Q96MT3 831 aaPredicted RBP14.31□□□□□ -0.12
TUBB3-202ENST00000553656 SLC2A11Q9BYW1 496 aa14.31□□□□□ -0.12
TUBB3-202ENST00000553656 TECTAO75443 2155 aa14.31□□□□□ -0.12
TUBB3-202ENST00000553656 TBC1D3BA6NDS4 549 aa14.3□□□□□ -0.12
TUBB3-202ENST00000553656 GFRA2O00451 464 aa14.3□□□□□ -0.12
TUBB3-202ENST00000553656 KAT7O95251 611 aa14.3□□□□□ -0.12
TUBB3-202ENST00000553656 AOC1P19801 751 aa14.3□□□□□ -0.12
TUBB3-202ENST00000553656 PCK1P35558 622 aa14.3□□□□□ -0.12
TUBB3-202ENST00000553656 MAGEA9P43362 315 aa14.3□□□□□ -0.12
TUBB3-202ENST00000553656 NOP2P46087 812 aaKnown RBP14.3□□□□□ -0.12
TUBB3-202ENST00000553656 SGSHP51688 502 aa14.3□□□□□ -0.12
TUBB3-202ENST00000553656 ZNF252P-AS1Q0IIN9 211 aa14.3□□□□□ -0.12
TUBB3-202ENST00000553656 FBXO43Q4G163 708 aa14.3□□□□□ -0.12
TUBB3-202ENST00000553656 RAB6CQ53S08 254 aa14.3□□□□□ -0.12
TUBB3-202ENST00000553656 NAIF1Q69YI7 327 aaPredicted RBP14.3□□□□□ -0.12
TUBB3-202ENST00000553656 FSTL4Q6MZW2 842 aa14.3□□□□□ -0.12
TUBB3-202ENST00000553656 FBXL22Q6P050 247 aa14.3□□□□□ -0.12
TUBB3-202ENST00000553656 TMEM139Q8IV31 216 aa14.3□□□□□ -0.12
TUBB3-202ENST00000553656 CCDC105Q8IYK2 499 aa14.3□□□□□ -0.12
TUBB3-202ENST00000553656 CARNMT1Q8N4J0 409 aa14.3□□□□□ -0.12
TUBB3-202ENST00000553656 CCDC185Q8N715 623 aa14.3□□□□□ -0.12
TUBB3-202ENST00000553656 NIPA2Q8N8Q9 360 aa14.3□□□□□ -0.12
TUBB3-202ENST00000553656 TERB1Q8NA31 727 aa14.3□□□□□ -0.12
TUBB3-202ENST00000553656 BTBD6Q96KE9 485 aa14.3□□□□□ -0.12
TUBB3-202ENST00000553656 PRMT1Q99873 361 aaKnown RBP14.3□□□□□ -0.12
TUBB3-202ENST00000553656 RAB6CQ9H0N0 254 aa14.3□□□□□ -0.12
TUBB3-202ENST00000553656 LMAN1LQ9HAT1 526 aa14.3□□□□□ -0.12
TUBB3-202ENST00000553656 ANLNQ9NQW6 1124 aa14.3□□□□□ -0.12
TUBB3-202ENST00000553656 TMPRSS4Q9NRS4 437 aa14.3□□□□□ -0.12
TUBB3-202ENST00000553656 PCSK1NQ9UHG2 260 aa14.3□□□□□ -0.12
TUBB3-202ENST00000553656 MTF2Q9Y483 593 aaPredicted RBP14.3□□□□□ -0.12
TUBB3-202ENST00000553656 A0A1B0GVM2 712 aa14.29□□□□□ -0.12
TUBB3-202ENST00000553656 TCAF2A6NFQ2 919 aa14.29□□□□□ -0.12
TUBB3-202ENST00000553656 SHISA7A6NL88 538 aa14.29□□□□□ -0.12
TUBB3-202ENST00000553656 TMEM110-MUSTN1A8MSY1 372 aa14.29□□□□□ -0.12
TUBB3-202ENST00000553656 E9PAM4 449 aa14.29□□□□□ -0.12
TUBB3-202ENST00000553656 H0Y626 953 aa14.29□□□□□ -0.12
TUBB3-202ENST00000553656 ARHGAP6O43182 974 aa14.29□□□□□ -0.12
TUBB3-202ENST00000553656 SRGAP2O75044 1071 aa14.29□□□□□ -0.12
TUBB3-202ENST00000553656 LRCH4O75427 683 aa14.29□□□□□ -0.12
TUBB3-202ENST00000553656 LUC7L3O95232 432 aaKnown RBP14.29□□□□□ -0.12
TUBB3-202ENST00000553656 EGFP01133 1207 aa14.29□□□□□ -0.12
TUBB3-202ENST00000553656 DCNP07585 359 aaKnown RBP14.29□□□□□ -0.12
TUBB3-202ENST00000553656 MIPP30301 263 aa14.29□□□□□ -0.12
TUBB3-202ENST00000553656 OXCT1P55809 520 aa14.29□□□□□ -0.12
TUBB3-202ENST00000553656 SCAPQ12770 1279 aa14.29□□□□□ -0.12
TUBB3-202ENST00000553656 HADHQ16836 314 aaKnown RBP14.29□□□□□ -0.12
TUBB3-202ENST00000553656 ANKS1BQ7Z6G8 1248 aa14.29□□□□□ -0.12
TUBB3-202ENST00000553656 LRRC8AQ8IWT6 810 aa14.29□□□□□ -0.12
TUBB3-202ENST00000553656 SYNPOQ8N3V7 929 aa14.29□□□□□ -0.12
TUBB3-202ENST00000553656 EPAS1Q99814 870 aa14.29□□□□□ -0.12
TUBB3-202ENST00000553656 OSBPL2Q9H1P3 480 aa14.29□□□□□ -0.12
TUBB3-202ENST00000553656 OSGEPQ9NPF4 335 aa14.29□□□□□ -0.12
TUBB3-202ENST00000553656 C11orf16Q9NQ32 467 aa14.29□□□□□ -0.12
TUBB3-202ENST00000553656 OR12D3Q9UGF7 316 aa14.29□□□□□ -0.12
TUBB3-202ENST00000553656 USP18Q9UMW8 372 aa14.29□□□□□ -0.12
TUBB3-202ENST00000553656 SNX10Q9Y5X0 201 aa14.29□□□□□ -0.12
TUBB3-202ENST00000553656 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.28□□□□□ -0.12
TUBB3-202ENST00000553656 I6L893 689 aaPredicted RBP14.28□□□□□ -0.12
TUBB3-202ENST00000553656 CLDN11O75508 207 aa14.28□□□□□ -0.12
TUBB3-202ENST00000553656 MTA2O94776 668 aa14.28□□□□□ -0.12
TUBB3-202ENST00000553656 PROSCO94903 275 aa14.28□□□□□ -0.12
TUBB3-202ENST00000553656 CHRNB1P11230 501 aa14.28□□□□□ -0.12
TUBB3-202ENST00000553656 MAN1A1P33908 653 aa14.28□□□□□ -0.12
TUBB3-202ENST00000553656 ARHGAP25P42331 645 aa14.28□□□□□ -0.12
TUBB3-202ENST00000553656 VAV2P52735 878 aa14.28□□□□□ -0.12
TUBB3-202ENST00000553656 NAP1L1P55209 391 aaKnown RBP14.28□□□□□ -0.12
TUBB3-202ENST00000553656 NRG1Q02297 640 aaPredicted RBP14.28□□□□□ -0.12
TUBB3-202ENST00000553656 ZNF177Q13360 481 aaPredicted RBP14.28□□□□□ -0.12
TUBB3-202ENST00000553656 CCINQ13939 588 aa14.28□□□□□ -0.12
TUBB3-202ENST00000553656 MESDQ14696 234 aa14.28□□□□□ -0.12
TUBB3-202ENST00000553656 E2F5Q15329 346 aa14.28□□□□□ -0.12
TUBB3-202ENST00000553656 ERMARDQ5T6L9 678 aa14.28□□□□□ -0.12
TUBB3-202ENST00000553656 RWDD4Q6NW29 188 aaKnown RBP14.28□□□□□ -0.12
TUBB3-202ENST00000553656 CHST9Q7L1S5 443 aa14.28□□□□□ -0.12
TUBB3-202ENST00000553656 C14orf80Q86SX3 495 aa14.28□□□□□ -0.12
TUBB3-202ENST00000553656 CIR1Q86X95 450 aaPredicted RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms