RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 BEST1O76090 585 aa7.55□□□□□ -1.2
ATXN3-221ENST00000553498 ACSL3O95573 720 aa7.55□□□□□ -1.2
ATXN3-221ENST00000553498 SHBGP04278 402 aa7.55□□□□□ -1.2
ATXN3-221ENST00000553498 ALDH2P05091 517 aa7.55□□□□□ -1.2
ATXN3-221ENST00000553498 SLC2A3P11169 496 aa7.55□□□□□ -1.2
ATXN3-221ENST00000553498 MLNP12872 115 aa7.55□□□□□ -1.2
ATXN3-221ENST00000553498 TPSB2P20231 275 aa7.55□□□□□ -1.2
ATXN3-221ENST00000553498 ADRA1BP35368 520 aa7.55□□□□□ -1.2
ATXN3-221ENST00000553498 CHKAP35790 457 aa7.55□□□□□ -1.2
ATXN3-221ENST00000553498 FDFT1P37268 417 aa7.55□□□□□ -1.2
ATXN3-221ENST00000553498 GLUD2P49448 558 aa7.55□□□□□ -1.2
ATXN3-221ENST00000553498 CXCR3P49682 368 aa7.55□□□□□ -1.2
ATXN3-221ENST00000553498 VPS41P49754 854 aa7.55□□□□□ -1.2
ATXN3-221ENST00000553498 AFF1P51825 1210 aaKnown RBP7.55□□□□□ -1.2
ATXN3-221ENST00000553498 GNGT1P63211 74 aa7.55□□□□□ -1.2
ATXN3-221ENST00000553498 FOXK2Q01167 660 aa7.55□□□□□ -1.2
ATXN3-221ENST00000553498 AUHQ13825 339 aaKnown RBP7.55□□□□□ -1.2
ATXN3-221ENST00000553498 MBTPS1Q14703 1052 aa7.55□□□□□ -1.2
ATXN3-221ENST00000553498 TPSAB1Q15661 275 aa7.55□□□□□ -1.2
ATXN3-221ENST00000553498 KYNUQ16719 465 aa7.55□□□□□ -1.2
ATXN3-221ENST00000553498 CCDC38Q502W7 563 aa7.55□□□□□ -1.2
ATXN3-221ENST00000553498 DNAJC21Q5F1R6 531 aaKnown RBP7.55□□□□□ -1.2
ATXN3-221ENST00000553498 PPP6R3Q5H9R7 873 aaPredicted RBP7.55□□□□□ -1.2
ATXN3-221ENST00000553498 C1orf53Q5VUE5 145 aa7.55□□□□□ -1.2
ATXN3-221ENST00000553498 HEATR6Q6AI08 1181 aaKnown RBP7.55□□□□□ -1.2
ATXN3-221ENST00000553498 RIPOR1Q6ZS17 1223 aa7.55□□□□□ -1.2
ATXN3-221ENST00000553498 CYS1Q717R9 158 aa7.55□□□□□ -1.2
ATXN3-221ENST00000553498 ANKRD33Q7Z3H0 272 aa7.55□□□□□ -1.2
ATXN3-221ENST00000553498 TADA2BQ86TJ2 420 aa7.55□□□□□ -1.2
ATXN3-221ENST00000553498 RTN4RL1Q86UN2 441 aaPredicted RBP7.55□□□□□ -1.2
ATXN3-221ENST00000553498 LRRC49Q8IUZ0 686 aa7.55□□□□□ -1.2
ATXN3-221ENST00000553498 CCNJLQ8IV13 435 aa7.55□□□□□ -1.2
ATXN3-221ENST00000553498 VPS52Q8N1B4 723 aa7.55□□□□□ -1.2
ATXN3-221ENST00000553498 SH2D3CQ8N5H7 860 aa7.55□□□□□ -1.2
ATXN3-221ENST00000553498 LZTR1Q8N653 840 aa7.55□□□□□ -1.2
ATXN3-221ENST00000553498 ZMIZ2Q8NF64 920 aa7.55□□□□□ -1.2
ATXN3-221ENST00000553498 CLEC4CQ8WTT0 213 aa7.55□□□□□ -1.2
ATXN3-221ENST00000553498 PYROXD1Q8WU10 500 aa7.55□□□□□ -1.2
ATXN3-221ENST00000553498 RNF139Q8WU17 664 aa7.55□□□□□ -1.2
ATXN3-221ENST00000553498 TFB1MQ8WVM0 346 aaKnown RBP7.55□□□□□ -1.2
ATXN3-221ENST00000553498 TOX2Q96NM4 488 aa7.55□□□□□ -1.2
ATXN3-221ENST00000553498 OLFM3Q96PB7 478 aa7.55□□□□□ -1.2
ATXN3-221ENST00000553498 HAPLN3Q96S86 360 aa7.55□□□□□ -1.2
ATXN3-221ENST00000553498 VAT1Q99536 393 aa7.55□□□□□ -1.2
ATXN3-221ENST00000553498 FAM118BQ9BPY3 351 aa7.55□□□□□ -1.2
ATXN3-221ENST00000553498 LPIN3Q9BQK8 851 aa7.55□□□□□ -1.2
ATXN3-221ENST00000553498 OSBPL2Q9H1P3 480 aa7.55□□□□□ -1.2
ATXN3-221ENST00000553498 EPN3Q9H201 632 aa7.55□□□□□ -1.2
ATXN3-221ENST00000553498 CCDC134Q9H6E4 229 aa7.55□□□□□ -1.2
ATXN3-221ENST00000553498 XAB2Q9HCS7 855 aaKnown RBP7.55□□□□□ -1.2
ATXN3-221ENST00000553498 SAYSD1Q9NPB0 183 aa7.55□□□□□ -1.2
ATXN3-221ENST00000553498 EIF2B3Q9NR50 452 aaKnown RBP7.55□□□□□ -1.2
ATXN3-221ENST00000553498 RNF19AQ9NV58 838 aa7.55□□□□□ -1.2
ATXN3-221ENST00000553498 TBC1D13Q9NVG8 400 aa7.55□□□□□ -1.2
ATXN3-221ENST00000553498 CALCOCO1Q9P1Z2 691 aa7.55□□□□□ -1.2
ATXN3-221ENST00000553498 BCCIPQ9P287 314 aaKnown RBP eCLIP7.55□□□□□ -1.2
ATXN3-221ENST00000553498 GGA2Q9UJY4 613 aa7.55□□□□□ -1.2
ATXN3-221ENST00000553498 OGDHLQ9ULD0 1010 aa7.55□□□□□ -1.2
ATXN3-221ENST00000553498 LRFN2Q9ULH4 789 aa7.55□□□□□ -1.2
ATXN3-221ENST00000553498 ZMYND8Q9ULU4 1186 aaPredicted RBP7.55□□□□□ -1.2
ATXN3-221ENST00000553498 INPP5FQ9Y2H2 1132 aa7.55□□□□□ -1.2
ATXN3-221ENST00000553498 MCM3APO60318 1980 aa7.55□□□□□ -1.2
ATXN3-221ENST00000553498 CASP8AP2Q9UKL3 1982 aa7.55□□□□□ -1.2
ATXN3-221ENST00000553498 CLUHO75153 1309 aa7.54□□□□□ -1.2
ATXN3-221ENST00000553498 A0A0A0MRY4 1105 aa7.54□□□□□ -1.2
ATXN3-221ENST00000553498 EXOC1LA0A1B0GW35 172 aa7.54□□□□□ -1.2
ATXN3-221ENST00000553498 TLDC2A0PJX2 215 aa7.54□□□□□ -1.2
ATXN3-221ENST00000553498 YJEFN3A6XGL0 299 aa7.54□□□□□ -1.2
ATXN3-221ENST00000553498 ERI2A8K979 691 aaKnown RBP7.54□□□□□ -1.2
ATXN3-221ENST00000553498 E7ENQ6 273 aa7.54□□□□□ -1.2
ATXN3-221ENST00000553498 EEF2KO00418 725 aaKnown RBP7.54□□□□□ -1.2
ATXN3-221ENST00000553498 ENPP3O14638 875 aa7.54□□□□□ -1.2
ATXN3-221ENST00000553498 TRDMT1O14717 391 aaKnown RBP7.54□□□□□ -1.2
ATXN3-221ENST00000553498 IGLV3-25P01717 112 aa7.54□□□□□ -1.2
ATXN3-221ENST00000553498 CXCL10P02778 98 aa7.54□□□□□ -1.2
ATXN3-221ENST00000553498 FYNP06241 537 aa7.54□□□□□ -1.2
ATXN3-221ENST00000553498 ZSCAN5DPP0CG00 497 aa7.54□□□□□ -1.2
ATXN3-221ENST00000553498 NCAM1P13591 858 aa7.54□□□□□ -1.2
ATXN3-221ENST00000553498 MSX1P28360 303 aa7.54□□□□□ -1.2
ATXN3-221ENST00000553498 LSP1P33241 339 aa7.54□□□□□ -1.2
ATXN3-221ENST00000553498 RFC2P35250 354 aa7.54□□□□□ -1.2
ATXN3-221ENST00000553498 BRCC3P46736 316 aa7.54□□□□□ -1.2
ATXN3-221ENST00000553498 COG7P83436 770 aa7.54□□□□□ -1.2
ATXN3-221ENST00000553498 NRG1Q02297 640 aaPredicted RBP7.54□□□□□ -1.2
ATXN3-221ENST00000553498 PDIA2Q13087 525 aaKnown RBP7.54□□□□□ -1.2
ATXN3-221ENST00000553498 SEMA3BQ13214 749 aa7.54□□□□□ -1.2
ATXN3-221ENST00000553498 SEMA5AQ13591 1074 aa7.54□□□□□ -1.2
ATXN3-221ENST00000553498 DPYSQ14117 519 aa7.54□□□□□ -1.2
ATXN3-221ENST00000553498 MRPL58Q14197 206 aaKnown RBP7.54□□□□□ -1.2
ATXN3-221ENST00000553498 KCNJ11Q14654 390 aa7.54□□□□□ -1.2
ATXN3-221ENST00000553498 PPP2R5DQ14738 602 aa7.54□□□□□ -1.2
ATXN3-221ENST00000553498 PRKD1Q15139 912 aaPredicted RBP7.54□□□□□ -1.2
ATXN3-221ENST00000553498 ZSCAN26Q16670 478 aa7.54□□□□□ -1.2
ATXN3-221ENST00000553498 CA9Q16790 459 aa7.54□□□□□ -1.2
ATXN3-221ENST00000553498 CLLU1OSQ5K130 101 aa7.54□□□□□ -1.2
ATXN3-221ENST00000553498 OTUD1Q5VV17 481 aaPredicted RBP7.54□□□□□ -1.2
ATXN3-221ENST00000553498 ARMC3Q5W041 872 aa7.54□□□□□ -1.2
ATXN3-221ENST00000553498 BSPRYQ5W0U4 402 aa7.54□□□□□ -1.2
ATXN3-221ENST00000553498 NCBP2-AS2Q69YL0 99 aa7.54□□□□□ -1.2
ATXN3-221ENST00000553498 ZNF280DQ6N043 979 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms