RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 BNC1Q01954 994 aa7.71□□□□□ -1.18
ATXN3-219ENST00000553488 SNX30Q5VWJ9 437 aa7.71□□□□□ -1.18
ATXN3-219ENST00000553488 HGSNATQ68CP4 663 aa7.71□□□□□ -1.18
ATXN3-219ENST00000553488 USP49Q70CQ1 688 aa7.71□□□□□ -1.18
ATXN3-219ENST00000553488 DYMQ7RTS9 669 aa7.71□□□□□ -1.18
ATXN3-219ENST00000553488 TMPRSS7Q7RTY8 843 aa7.71□□□□□ -1.18
ATXN3-219ENST00000553488 TMEM25Q86YD3 366 aa7.71□□□□□ -1.18
ATXN3-219ENST00000553488 CCNJLQ8IV13 435 aa7.71□□□□□ -1.18
ATXN3-219ENST00000553488 NAT16Q8N8M0 369 aa7.71□□□□□ -1.18
ATXN3-219ENST00000553488 HNRNPLLQ8WVV9 542 aaKnown RBP7.71□□□□□ -1.18
ATXN3-219ENST00000553488 DNASE2BQ8WZ79 361 aa7.71□□□□□ -1.18
ATXN3-219ENST00000553488 OVCA2Q8WZ82 227 aa7.71□□□□□ -1.18
ATXN3-219ENST00000553488 TP53INP1Q96A56 240 aa7.71□□□□□ -1.18
ATXN3-219ENST00000553488 P2RY11Q96G91 374 aa7.71□□□□□ -1.18
ATXN3-219ENST00000553488 CRELD1Q96HD1 420 aa7.71□□□□□ -1.18
ATXN3-219ENST00000553488 HPDLQ96IR7 371 aa7.71□□□□□ -1.18
ATXN3-219ENST00000553488 MRGPRX1Q96LB2 322 aa7.71□□□□□ -1.18
ATXN3-219ENST00000553488 SLITRK1Q96PX8 696 aa7.71□□□□□ -1.18
ATXN3-219ENST00000553488 ACCSQ96QU6 501 aa7.71□□□□□ -1.18
ATXN3-219ENST00000553488 TCF12Q99081 682 aa7.71□□□□□ -1.18
ATXN3-219ENST00000553488 ELOVL4Q9GZR5 314 aa7.71□□□□□ -1.18
ATXN3-219ENST00000553488 FAM124BQ9H5Z6 455 aaPredicted RBP7.71□□□□□ -1.18
ATXN3-219ENST00000553488 CCSER2Q9H7U1 834 aa7.71□□□□□ -1.18
ATXN3-219ENST00000553488 MRPL44Q9H9J2 332 aaKnown RBP7.71□□□□□ -1.18
ATXN3-219ENST00000553488 IL21RQ9HBE5 538 aa7.71□□□□□ -1.18
ATXN3-219ENST00000553488 SPHK2Q9NRA0 654 aa7.71□□□□□ -1.18
ATXN3-219ENST00000553488 TBC1D7Q9P0N9 293 aa7.71□□□□□ -1.18
ATXN3-219ENST00000553488 KIAA1522Q9P206 1035 aaPredicted RBP7.71□□□□□ -1.18
ATXN3-219ENST00000553488 DEC1Q9P2X7 70 aa7.71□□□□□ -1.18
ATXN3-219ENST00000553488 EXOC7Q9UPT5 735 aa7.71□□□□□ -1.18
ATXN3-219ENST00000553488 NFE2L3Q9Y4A8 694 aa7.71□□□□□ -1.18
ATXN3-219ENST00000553488 RAD54BQ9Y620 910 aa7.71□□□□□ -1.18
ATXN3-219ENST00000553488 SPTA1P02549 2419 aa7.71□□□□□ -1.18
ATXN3-219ENST00000553488 HECTD1Q9ULT8 2610 aa7.7□□□□□ -1.18
ATXN3-219ENST00000553488 A0A087WV48 116 aa7.7□□□□□ -1.18
ATXN3-219ENST00000553488 FAM92AA1XBS5 289 aa7.7□□□□□ -1.18
ATXN3-219ENST00000553488 TACC1O75410 805 aa7.7□□□□□ -1.18
ATXN3-219ENST00000553488 C1QL1O75973 258 aa7.7□□□□□ -1.18
ATXN3-219ENST00000553488 GAP43P17677 238 aa7.7□□□□□ -1.18
ATXN3-219ENST00000553488 MAOBP27338 520 aa7.7□□□□□ -1.18
ATXN3-219ENST00000553488 CDC25BP30305 580 aa7.7□□□□□ -1.18
ATXN3-219ENST00000553488 PGFP49763 221 aa7.7□□□□□ -1.18
ATXN3-219ENST00000553488 IFRD2Q12894 506 aaPredicted RBP7.7□□□□□ -1.18
ATXN3-219ENST00000553488 MYO1EQ12965 1108 aa7.7□□□□□ -1.18
ATXN3-219ENST00000553488 ORC1Q13415 861 aa7.7□□□□□ -1.18
ATXN3-219ENST00000553488 TDRD10Q5VZ19 366 aaKnown RBP7.7□□□□□ -1.18
ATXN3-219ENST00000553488 GRAMD4Q6IC98 578 aa7.7□□□□□ -1.18
ATXN3-219ENST00000553488 DBX2Q6ZNG2 339 aa7.7□□□□□ -1.18
ATXN3-219ENST00000553488 CBWD2Q8IUF1 395 aa7.7□□□□□ -1.18
ATXN3-219ENST00000553488 GPD1LQ8N335 351 aa7.7□□□□□ -1.18
ATXN3-219ENST00000553488 ZCCHC9Q8N567 271 aaKnown RBP7.7□□□□□ -1.18
ATXN3-219ENST00000553488 PDZD8Q8NEN9 1154 aa7.7□□□□□ -1.18
ATXN3-219ENST00000553488 FBXO32Q969P5 355 aa7.7□□□□□ -1.18
ATXN3-219ENST00000553488 ERLEC1Q96DZ1 483 aa7.7□□□□□ -1.18
ATXN3-219ENST00000553488 ANKRD36BP1Q96IX9 119 aa7.7□□□□□ -1.18
ATXN3-219ENST00000553488 EPSTI1Q96J88 318 aa7.7□□□□□ -1.18
ATXN3-219ENST00000553488 LRIG1Q96JA1 1093 aa7.7□□□□□ -1.18
ATXN3-219ENST00000553488 B3GNT5Q9BYG0 378 aa7.7□□□□□ -1.18
ATXN3-219ENST00000553488 ZDHHC5Q9C0B5 715 aa7.7□□□□□ -1.18
ATXN3-219ENST00000553488 PCIF1Q9H4Z3 704 aa7.7□□□□□ -1.18
ATXN3-219ENST00000553488 DNAJC17Q9NVM6 304 aaKnown RBP7.7□□□□□ -1.18
ATXN3-219ENST00000553488 WSB2Q9NYS7 404 aaPredicted RBP7.7□□□□□ -1.18
ATXN3-219ENST00000553488 IL37Q9NZH6 218 aa7.7□□□□□ -1.18
ATXN3-219ENST00000553488 USP36Q9P275 1121 aaKnown RBP7.7□□□□□ -1.18
ATXN3-219ENST00000553488 APOBEC2Q9Y235 224 aaKnown RBP7.7□□□□□ -1.18
ATXN3-219ENST00000553488 BOD1L1Q8NFC6 3051 aa7.7□□□□□ -1.18
ATXN3-219ENST00000553488 COL12A1Q99715 3063 aa7.7□□□□□ -1.18
ATXN3-219ENST00000553488 PTPN13Q12923 2485 aa7.7□□□□□ -1.18
ATXN3-219ENST00000553488 A0A1B0GTW7 788 aa7.69□□□□□ -1.18
ATXN3-219ENST00000553488 CLDN5O00501 218 aa7.69□□□□□ -1.18
ATXN3-219ENST00000553488 DDX3YO15523 660 aaKnown RBP7.69□□□□□ -1.18
ATXN3-219ENST00000553488 CILPO75339 1184 aa7.69□□□□□ -1.18
ATXN3-219ENST00000553488 RTN3O95197 1032 aaPredicted RBP7.69□□□□□ -1.18
ATXN3-219ENST00000553488 GCNT3O95395 438 aa7.69□□□□□ -1.18
ATXN3-219ENST00000553488 TNNC2P02585 160 aa7.69□□□□□ -1.18
ATXN3-219ENST00000553488 NEFLP07196 543 aa7.69□□□□□ -1.18
ATXN3-219ENST00000553488 CISD3P0C7P0 127 aa7.69□□□□□ -1.18
ATXN3-219ENST00000553488 ATXN1LP0C7T5 689 aaKnown RBP7.69□□□□□ -1.18
ATXN3-219ENST00000553488 TYRP14679 529 aa7.69□□□□□ -1.18
ATXN3-219ENST00000553488 GNSP15586 552 aa7.69□□□□□ -1.18
ATXN3-219ENST00000553488 PTPN1P18031 435 aaKnown RBP7.69□□□□□ -1.18
ATXN3-219ENST00000553488 YWHAQP27348 245 aa7.69□□□□□ -1.18
ATXN3-219ENST00000553488 CD6P30203 668 aa7.69□□□□□ -1.18
ATXN3-219ENST00000553488 SLC5A3P53794 718 aa7.69□□□□□ -1.18
ATXN3-219ENST00000553488 ALCAMQ13740 583 aa7.69□□□□□ -1.18
ATXN3-219ENST00000553488 ENPP2Q13822 863 aa7.69□□□□□ -1.18
ATXN3-219ENST00000553488 ANO4Q32M45 955 aa7.69□□□□□ -1.18
ATXN3-219ENST00000553488 PREPLQ4J6C6 727 aaPredicted RBP7.69□□□□□ -1.18
ATXN3-219ENST00000553488 WDR45BQ5MNZ6 344 aa7.69□□□□□ -1.18
ATXN3-219ENST00000553488 HECTD3Q5T447 861 aa7.69□□□□□ -1.18
ATXN3-219ENST00000553488 BTBD8Q5XKL5 378 aa7.69□□□□□ -1.18
ATXN3-219ENST00000553488 PAQR9Q6ZVX9 377 aa7.69□□□□□ -1.18
ATXN3-219ENST00000553488 HS2ST1Q7LGA3 356 aa7.69□□□□□ -1.18
ATXN3-219ENST00000553488 MARCH9Q86YJ5 346 aa7.69□□□□□ -1.18
ATXN3-219ENST00000553488 WDR49Q8IV35 697 aa7.69□□□□□ -1.18
ATXN3-219ENST00000553488 CHPFQ8IZ52 775 aa7.69□□□□□ -1.18
ATXN3-219ENST00000553488 NUP93Q8N1F7 819 aa7.69□□□□□ -1.18
ATXN3-219ENST00000553488 AGGF1Q8N302 714 aaeCLIP7.69□□□□□ -1.18
ATXN3-219ENST00000553488 B3GALNT2Q8NCR0 500 aa7.69□□□□□ -1.18
ATXN3-219ENST00000553488 GLIS3Q8NEA6 775 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms