RNA–Protein interactions for RNA: ENST00000553406.1

DDHD1-204, Transcript of DDHD domain containing 1, human

TSL 3

Gene DDHD1, Length 558 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDHD1-204	ENST00000553406	RASSF9	O75901	435 aa		5	□□□□□ -1.61
DDHD1-204	ENST00000553406	RASAL1	O95294	804 aa		5	□□□□□ -1.61
DDHD1-204	ENST00000553406	HRG	P04196	525 aa		5	□□□□□ -1.61
DDHD1-204	ENST00000553406	S100B	P04271	92 aa	Predicted RBP	5	□□□□□ -1.61
DDHD1-204	ENST00000553406	ATP5F1	P24539	256 aa	Predicted RBP	5	□□□□□ -1.61
DDHD1-204	ENST00000553406	IL1R2	P27930	398 aa		5	□□□□□ -1.61
DDHD1-204	ENST00000553406	TM4SF1	P30408	202 aa		5	□□□□□ -1.61
DDHD1-204	ENST00000553406	PLCD1	P51178	756 aa		5	□□□□□ -1.61
DDHD1-204	ENST00000553406	ZNF268	Q14587	947 aa	Predicted RBP	5	□□□□□ -1.61
DDHD1-204	ENST00000553406	POLD3	Q15054	466 aa	Predicted RBP	5	□□□□□ -1.61
DDHD1-204	ENST00000553406	NPY5R	Q15761	445 aa		5	□□□□□ -1.61
DDHD1-204	ENST00000553406	ZNF750	Q32MQ0	723 aa		5	□□□□□ -1.61
DDHD1-204	ENST00000553406	LCE1A	Q5T7P2	110 aa		5	□□□□□ -1.61
DDHD1-204	ENST00000553406	PXDC1	Q5TGL8	231 aa		5	□□□□□ -1.61
DDHD1-204	ENST00000553406	CLEC4G	Q6UXB4	293 aa		5	□□□□□ -1.61
DDHD1-204	ENST00000553406	SMIM5	Q71RC9	77 aa		5	□□□□□ -1.61
DDHD1-204	ENST00000553406	SRGAP1	Q7Z6B7	1085 aa		5	□□□□□ -1.61
DDHD1-204	ENST00000553406	PRSS3P2	Q8NHM4	247 aa		5	□□□□□ -1.61
DDHD1-204	ENST00000553406	ZC3H10	Q96K80	434 aa	Known RBP	5	□□□□□ -1.61
DDHD1-204	ENST00000553406	FAM83D	Q9H4H8	585 aa		5	□□□□□ -1.61
DDHD1-204	ENST00000553406	SRP68	Q9UHB9	627 aa	Known RBP	5	□□□□□ -1.61
DDHD1-204	ENST00000553406	RRP7A	Q9Y3A4	280 aa	Known RBP	5	□□□□□ -1.61
DDHD1-204	ENST00000553406	USP16	Q9Y5T5	823 aa		5	□□□□□ -1.61
DDHD1-204	ENST00000553406	SLX4	Q8IY92	1834 aa		5	□□□□□ -1.61
DDHD1-204	ENST00000553406	MAP3K15	Q6ZN16	1313 aa		4.99	□□□□□ -1.61
DDHD1-204	ENST00000553406	CCDC88A	Q3V6T2	1871 aa		4.99	□□□□□ -1.61
DDHD1-204	ENST00000553406	AQP7P3	A6NL99	342 aa		4.99	□□□□□ -1.61
DDHD1-204	ENST00000553406	KRTAP29-1	A8MX34	341 aa	Predicted RBP	4.99	□□□□□ -1.61
DDHD1-204	ENST00000553406	ERVV-1	B6SEH8	477 aa		4.99	□□□□□ -1.61
DDHD1-204	ENST00000553406		H3BNC9	293 aa		4.99	□□□□□ -1.61
DDHD1-204	ENST00000553406		H7C4K7	107 aa		4.99	□□□□□ -1.61
DDHD1-204	ENST00000553406	DSCR3	O14972	297 aa		4.99	□□□□□ -1.61
DDHD1-204	ENST00000553406	SPRY2	O43597	315 aa		4.99	□□□□□ -1.61
DDHD1-204	ENST00000553406	INMT	O95050	263 aa		4.99	□□□□□ -1.61
DDHD1-204	ENST00000553406	APEH	P13798	732 aa	Known RBP	4.99	□□□□□ -1.61
DDHD1-204	ENST00000553406	CD19	P15391	556 aa		4.99	□□□□□ -1.61
DDHD1-204	ENST00000553406	PTDSS1	P48651	473 aa	Known RBP	4.99	□□□□□ -1.61
DDHD1-204	ENST00000553406	DIO1	P49895	249 aa		4.99	□□□□□ -1.61
DDHD1-204	ENST00000553406	FMO1	Q01740	532 aa		4.99	□□□□□ -1.61
DDHD1-204	ENST00000553406	SLC29A2	Q14542	456 aa		4.99	□□□□□ -1.61
DDHD1-204	ENST00000553406	LARS2	Q15031	903 aa	Known RBP	4.99	□□□□□ -1.61
DDHD1-204	ENST00000553406	ARHGAP29	Q52LW3	1261 aa		4.99	□□□□□ -1.61
DDHD1-204	ENST00000553406	KCTD20	Q7Z5Y7	419 aa		4.99	□□□□□ -1.61
DDHD1-204	ENST00000553406	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	4.99	□□□□□ -1.61
DDHD1-204	ENST00000553406	LRTOMT	Q8WZ04	291 aa		4.99	□□□□□ -1.61
DDHD1-204	ENST00000553406	APIP	Q96GX9	242 aa		4.99	□□□□□ -1.61
DDHD1-204	ENST00000553406	MSLNL	Q96KJ4	702 aa		4.99	□□□□□ -1.61
DDHD1-204	ENST00000553406	EFHD1	Q9BUP0	239 aa		4.99	□□□□□ -1.61
DDHD1-204	ENST00000553406	ZCWPW1	Q9H0M4	648 aa		4.99	□□□□□ -1.61
DDHD1-204	ENST00000553406	ELOVL5	Q9NYP7	299 aa		4.99	□□□□□ -1.61
DDHD1-204	ENST00000553406	MIS18A	Q9NYP9	233 aa		4.99	□□□□□ -1.61
DDHD1-204	ENST00000553406	COL20A1	Q9P218	1284 aa		4.99	□□□□□ -1.61
DDHD1-204	ENST00000553406	KLHL13	Q9P2N7	655 aa		4.99	□□□□□ -1.61
DDHD1-204	ENST00000553406	PSME4	Q14997	1843 aa		4.99	□□□□□ -1.61
DDHD1-204	ENST00000553406	ZNF646	O15015	1829 aa	Predicted RBP	4.98	□□□□□ -1.61
DDHD1-204	ENST00000553406	SPEF2	Q9C093	1822 aa		4.98	□□□□□ -1.61
DDHD1-204	ENST00000553406		A6NNZ2	444 aa		4.98	□□□□□ -1.61
DDHD1-204	ENST00000553406		A8MVJ9	347 aa		4.98	□□□□□ -1.61
DDHD1-204	ENST00000553406	FCHO1	O14526	889 aa		4.98	□□□□□ -1.61
DDHD1-204	ENST00000553406	KCNAB3	O43448	404 aa		4.98	□□□□□ -1.61
DDHD1-204	ENST00000553406	PIAS2	O75928	621 aa		4.98	□□□□□ -1.61
DDHD1-204	ENST00000553406	RNF8	O76064	485 aa		4.98	□□□□□ -1.61
DDHD1-204	ENST00000553406	ZBED1	O96006	694 aa		4.98	□□□□□ -1.61
DDHD1-204	ENST00000553406	TXN	P10599	105 aa	Known RBP	4.98	□□□□□ -1.61
DDHD1-204	ENST00000553406	MYF5	P13349	255 aa		4.98	□□□□□ -1.61
DDHD1-204	ENST00000553406	CREB1	P16220	341 aa		4.98	□□□□□ -1.61
DDHD1-204	ENST00000553406	ACVR2A	P27037	513 aa		4.98	□□□□□ -1.61
DDHD1-204	ENST00000553406	CPT1A	P50416	773 aa		4.98	□□□□□ -1.61
DDHD1-204	ENST00000553406	PGD	P52209	483 aa		4.98	□□□□□ -1.61
DDHD1-204	ENST00000553406	RPS16	P62249	146 aa	Known RBP	4.98	□□□□□ -1.61
DDHD1-204	ENST00000553406	LRRC41	Q15345	812 aa		4.98	□□□□□ -1.61
DDHD1-204	ENST00000553406	RNF220	Q5VTB9	566 aa		4.98	□□□□□ -1.61
DDHD1-204	ENST00000553406	CHST15	Q7LFX5	561 aa	Predicted RBP	4.98	□□□□□ -1.61
DDHD1-204	ENST00000553406	WDR63	Q8IWG1	891 aa		4.98	□□□□□ -1.61
DDHD1-204	ENST00000553406	YAF2	Q8IY57	180 aa		4.98	□□□□□ -1.61
DDHD1-204	ENST00000553406	IPO4	Q8TEX9	1081 aa	Known RBP	4.98	□□□□□ -1.61
DDHD1-204	ENST00000553406	COQ8B	Q96D53	544 aa		4.98	□□□□□ -1.61
DDHD1-204	ENST00000553406	HMCES	Q96FZ2	354 aa		4.98	□□□□□ -1.61
DDHD1-204	ENST00000553406	WDYHV1	Q96HA8	205 aa		4.98	□□□□□ -1.61
DDHD1-204	ENST00000553406	STK31	Q9BXU1	1019 aa		4.98	□□□□□ -1.61
DDHD1-204	ENST00000553406	SPRTN	Q9H040	489 aa	Predicted RBP	4.98	□□□□□ -1.61
DDHD1-204	ENST00000553406	DDX21	Q9NR30	783 aa	Known RBP eCLIP	4.98	□□□□□ -1.61
DDHD1-204	ENST00000553406	MGAT4C	Q9UBM8	478 aa		4.98	□□□□□ -1.61
DDHD1-204	ENST00000553406	HDAC9	Q9UKV0	1011 aa		4.98	□□□□□ -1.61
DDHD1-204	ENST00000553406	OGDHL	Q9ULD0	1010 aa		4.98	□□□□□ -1.61
DDHD1-204	ENST00000553406	MAFF	Q9ULX9	164 aa		4.98	□□□□□ -1.61
DDHD1-204	ENST00000553406	ABCC12	Q96J65	1359 aa		4.98	□□□□□ -1.61
DDHD1-204	ENST00000553406	DUOX1	Q9NRD9	1551 aa		4.98	□□□□□ -1.61
DDHD1-204	ENST00000553406	UBN2	Q6ZU65	1347 aa		4.97	□□□□□ -1.61
DDHD1-204	ENST00000553406	COL4A1	P02462	1669 aa		4.97	□□□□□ -1.61
DDHD1-204	ENST00000553406	GOLIM4	O00461	696 aa		4.97	□□□□□ -1.61
DDHD1-204	ENST00000553406	FGB	P02675	491 aa		4.97	□□□□□ -1.61
DDHD1-204	ENST00000553406	PTMA	P06454	111 aa	Known RBP	4.97	□□□□□ -1.61
DDHD1-204	ENST00000553406	HSP90AA1	P07900	732 aa	Known RBP	4.97	□□□□□ -1.61
DDHD1-204	ENST00000553406	ZKSCAN1	P17029	563 aa	Predicted RBP	4.97	□□□□□ -1.61
DDHD1-204	ENST00000553406	RPL17	P18621	184 aa	Known RBP	4.97	□□□□□ -1.61
DDHD1-204	ENST00000553406	NR4A2	P43354	598 aa		4.97	□□□□□ -1.61
DDHD1-204	ENST00000553406	PIP4K2A	P48426	406 aa	Predicted RBP	4.97	□□□□□ -1.61
DDHD1-204	ENST00000553406	GATM	P50440	423 aa		4.97	□□□□□ -1.61
DDHD1-204	ENST00000553406	COPB1	P53618	953 aa	Known RBP	4.97	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms