RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 GALCP54803 685 aa9.46□□□□□ -0.9
SYNE2-209ENST00000553308 ADIGQ0VDE8 80 aa9.46□□□□□ -0.9
SYNE2-209ENST00000553308 TARDBPQ13148 414 aaKnown RBP eCLIP9.46□□□□□ -0.9
SYNE2-209ENST00000553308 GOLGA7BQ2TAP0 167 aa9.46□□□□□ -0.9
SYNE2-209ENST00000553308 ADGRF1Q5T601 910 aa9.46□□□□□ -0.9
SYNE2-209ENST00000553308 ARHGAP17Q68EM7 881 aa9.46□□□□□ -0.9
SYNE2-209ENST00000553308 PM20D1Q6GTS8 502 aa9.46□□□□□ -0.9
SYNE2-209ENST00000553308 RFWD3Q6PCD5 774 aa9.46□□□□□ -0.9
SYNE2-209ENST00000553308 NCEH1Q6PIU2 408 aa9.46□□□□□ -0.9
SYNE2-209ENST00000553308 LRRC69Q6ZNQ3 347 aa9.46□□□□□ -0.9
SYNE2-209ENST00000553308 USP30Q70CQ3 517 aa9.46□□□□□ -0.9
SYNE2-209ENST00000553308 CEP57L1Q8IYX8 460 aa9.46□□□□□ -0.9
SYNE2-209ENST00000553308 EID2Q8N6I1 236 aa9.46□□□□□ -0.9
SYNE2-209ENST00000553308 ANKRD52Q8NB46 1076 aa9.46□□□□□ -0.9
SYNE2-209ENST00000553308 SAP25Q8TEE9 199 aa9.46□□□□□ -0.9
SYNE2-209ENST00000553308 GANCQ8TET4 914 aa9.46□□□□□ -0.9
SYNE2-209ENST00000553308 GOLGA1Q92805 767 aa9.46□□□□□ -0.9
SYNE2-209ENST00000553308 SEMA4DQ92854 862 aa9.46□□□□□ -0.9
SYNE2-209ENST00000553308 PAGE5Q96GU1 130 aa9.46□□□□□ -0.9
SYNE2-209ENST00000553308 MYO19Q96H55 970 aa9.46□□□□□ -0.9
SYNE2-209ENST00000553308 TMEM176AQ96HP8 235 aa9.46□□□□□ -0.9
SYNE2-209ENST00000553308 FCRL3Q96P31 734 aaPredicted RBP9.46□□□□□ -0.9
SYNE2-209ENST00000553308 RSPH9Q9H1X1 276 aaPredicted RBP9.46□□□□□ -0.9
SYNE2-209ENST00000553308 CISHQ9NSE2 258 aa9.46□□□□□ -0.9
SYNE2-209ENST00000553308 OLA1Q9NTK5 396 aaKnown RBP9.46□□□□□ -0.9
SYNE2-209ENST00000553308 FBXL12Q9NXK8 326 aa9.46□□□□□ -0.9
SYNE2-209ENST00000553308 STOML2Q9UJZ1 356 aa9.46□□□□□ -0.9
SYNE2-209ENST00000553308 TRAF3IP3Q9Y228 551 aa9.46□□□□□ -0.9
SYNE2-209ENST00000553308 HBS1LQ9Y450 684 aaKnown RBP9.46□□□□□ -0.9
SYNE2-209ENST00000553308 AK5Q9Y6K8 562 aa9.46□□□□□ -0.9
SYNE2-209ENST00000553308 SMG1Q96Q15 3661 aaKnown RBP9.46□□□□□ -0.9
SYNE2-209ENST00000553308 GOLGA6L7A0A1B0GV03 622 aa9.45□□□□□ -0.9
SYNE2-209ENST00000553308 YJEFN3A6XGL0 299 aa9.45□□□□□ -0.9
SYNE2-209ENST00000553308 E7ENQ6 273 aa9.45□□□□□ -0.9
SYNE2-209ENST00000553308 XPO1O14980 1071 aaKnown RBP9.45□□□□□ -0.9
SYNE2-209ENST00000553308 MID1O15344 667 aa9.45□□□□□ -0.9
SYNE2-209ENST00000553308 CALUO43852 315 aaPredicted RBP9.45□□□□□ -0.9
SYNE2-209ENST00000553308 TBL1XO60907 577 aa9.45□□□□□ -0.9
SYNE2-209ENST00000553308 SIN3BO75182 1162 aa9.45□□□□□ -0.9
SYNE2-209ENST00000553308 LATS1O95835 1130 aa9.45□□□□□ -0.9
SYNE2-209ENST00000553308 SLFN14P0C7P3 912 aa9.45□□□□□ -0.9
SYNE2-209ENST00000553308 KRT13P13646 458 aa9.45□□□□□ -0.9
SYNE2-209ENST00000553308 PLA2G2AP14555 144 aa9.45□□□□□ -0.9
SYNE2-209ENST00000553308 POLR2EP19388 210 aaKnown RBP9.45□□□□□ -0.9
SYNE2-209ENST00000553308 EPHA8P29322 1005 aaPredicted RBP9.45□□□□□ -0.9
SYNE2-209ENST00000553308 SLC6A4P31645 630 aa9.45□□□□□ -0.9
SYNE2-209ENST00000553308 ZNF445P59923 1031 aa9.45□□□□□ -0.9
SYNE2-209ENST00000553308 KCNJ12Q14500 433 aa9.45□□□□□ -0.9
SYNE2-209ENST00000553308 BSPRYQ5W0U4 402 aa9.45□□□□□ -0.9
SYNE2-209ENST00000553308 FBXL19Q6PCT2 694 aa9.45□□□□□ -0.9
SYNE2-209ENST00000553308 INTS8Q75QN2 995 aaKnown RBP9.45□□□□□ -0.9
SYNE2-209ENST00000553308 DHX40Q8IX18 779 aaKnown RBP9.45□□□□□ -0.9
SYNE2-209ENST00000553308 FAM186BQ8IYM0 893 aa9.45□□□□□ -0.9
SYNE2-209ENST00000553308 CCDC150Q8NCX0 1101 aa9.45□□□□□ -0.9
SYNE2-209ENST00000553308 RNF139Q8WU17 664 aa9.45□□□□□ -0.9
SYNE2-209ENST00000553308 TATDN2Q93075 761 aa9.45□□□□□ -0.9
SYNE2-209ENST00000553308 PRICKLE1Q96MT3 831 aaPredicted RBP9.45□□□□□ -0.9
SYNE2-209ENST00000553308 UBXN6Q9BZV1 441 aa9.45□□□□□ -0.9
SYNE2-209ENST00000553308 DNAI2Q9GZS0 605 aa9.45□□□□□ -0.9
SYNE2-209ENST00000553308 NEUROG2Q9H2A3 272 aa9.45□□□□□ -0.9
SYNE2-209ENST00000553308 TMEM8AQ9HCN3 771 aa9.45□□□□□ -0.9
SYNE2-209ENST00000553308 AASDHPPTQ9NRN7 309 aa9.45□□□□□ -0.9
SYNE2-209ENST00000553308 SUN2Q9UH99 717 aa9.45□□□□□ -0.9
SYNE2-209ENST00000553308 TSPAN16Q9UKR8 245 aa9.45□□□□□ -0.9
SYNE2-209ENST00000553308 NCKAP1Q9Y2A7 1128 aa9.45□□□□□ -0.9
SYNE2-209ENST00000553308 NYNRINQ9P2P1 1898 aaKnown RBP9.45□□□□□ -0.9
SYNE2-209ENST00000553308 MYLKQ15746 1914 aa9.44□□□□□ -0.9
SYNE2-209ENST00000553308 A0A1W2PR77 199 aa9.44□□□□□ -0.9
SYNE2-209ENST00000553308 C10orf142B7Z368 130 aa9.44□□□□□ -0.9
SYNE2-209ENST00000553308 RRP8O43159 456 aaKnown RBP9.44□□□□□ -0.9
SYNE2-209ENST00000553308 RNASEH2AO75792 299 aaKnown RBP9.44□□□□□ -0.9
SYNE2-209ENST00000553308 C1SP09871 688 aa9.44□□□□□ -0.9
SYNE2-209ENST00000553308 CD38P28907 300 aa9.44□□□□□ -0.9
SYNE2-209ENST00000553308 CSKP41240 450 aa9.44□□□□□ -0.9
SYNE2-209ENST00000553308 SLC8A3P57103 927 aa9.44□□□□□ -0.9
SYNE2-209ENST00000553308 RTP5Q14D33 572 aa9.44□□□□□ -0.9
SYNE2-209ENST00000553308 CST6Q15828 149 aa9.44□□□□□ -0.9
SYNE2-209ENST00000553308 NFIL3Q16649 462 aa9.44□□□□□ -0.9
SYNE2-209ENST00000553308 HNRNPA1L2Q32P51 320 aaKnown RBP9.44□□□□□ -0.9
SYNE2-209ENST00000553308 FAM133BQ5BKY9 247 aaKnown RBP9.44□□□□□ -0.9
SYNE2-209ENST00000553308 PIK3R6Q5UE93 754 aa9.44□□□□□ -0.9
SYNE2-209ENST00000553308 KRT39Q6A163 491 aa9.44□□□□□ -0.9
SYNE2-209ENST00000553308 MMAAQ8IVH4 418 aaKnown RBP9.44□□□□□ -0.9
SYNE2-209ENST00000553308 MFN1Q8IWA4 741 aa9.44□□□□□ -0.9
SYNE2-209ENST00000553308 ZNF843Q8N446 348 aa9.44□□□□□ -0.9
SYNE2-209ENST00000553308 SNIP1Q8TAD8 396 aaKnown RBP9.44□□□□□ -0.9
SYNE2-209ENST00000553308 TSC1Q92574 1164 aa9.44□□□□□ -0.9
SYNE2-209ENST00000553308 MYEOVQ96EZ4 313 aa9.44□□□□□ -0.9
SYNE2-209ENST00000553308 LMLNQ96KR4 655 aa9.44□□□□□ -0.9
SYNE2-209ENST00000553308 MRGPRX3Q96LB0 322 aa9.44□□□□□ -0.9
SYNE2-209ENST00000553308 IPO9Q96P70 1041 aaKnown RBP9.44□□□□□ -0.9
SYNE2-209ENST00000553308 NRSN2Q9GZP1 204 aa9.44□□□□□ -0.9
SYNE2-209ENST00000553308 LRRC4Q9HBW1 653 aa9.44□□□□□ -0.9
SYNE2-209ENST00000553308 GDF3Q9NR23 364 aa9.44□□□□□ -0.9
SYNE2-209ENST00000553308 STIM2Q9P246 746 aa9.44□□□□□ -0.9
SYNE2-209ENST00000553308 INTS6Q9UL03 887 aaKnown RBP9.44□□□□□ -0.9
SYNE2-209ENST00000553308 SCML1Q9UN30 329 aa9.44□□□□□ -0.9
SYNE2-209ENST00000553308 MAPK8IP1Q9UQF2 711 aa9.44□□□□□ -0.9
SYNE2-209ENST00000553308 BPTFQ12830 3046 aa9.43□□□□□ -0.9
SYNE2-209ENST00000553308 LRRC72A6NJI9 287 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms