RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 TMPRSS6Q8IU80 811 aa13.43□□□□□ -0.26
ACTN1-207ENST00000553290 ZDHHC17Q8IUH5 632 aa13.43□□□□□ -0.26
ACTN1-207ENST00000553290 DEFB106AQ8N104 65 aa13.43□□□□□ -0.26
ACTN1-207ENST00000553290 TMEM35BQ8NCS4 154 aa13.43□□□□□ -0.26
ACTN1-207ENST00000553290 WFDC5Q8TCV5 224 aa13.43□□□□□ -0.26
ACTN1-207ENST00000553290 PRCCQ92733 491 aaPredicted RBP13.43□□□□□ -0.26
ACTN1-207ENST00000553290 SIPA1Q96FS4 1042 aa13.43□□□□□ -0.26
ACTN1-207ENST00000553290 PRICKLE1Q96MT3 831 aaPredicted RBP13.43□□□□□ -0.26
ACTN1-207ENST00000553290 LSM14BQ9BX40 385 aaKnown RBP13.43□□□□□ -0.26
ACTN1-207ENST00000553290 NAA15Q9BXJ9 866 aaKnown RBP13.43□□□□□ -0.26
ACTN1-207ENST00000553290 NUSAP1Q9BXS6 441 aaKnown RBP13.43□□□□□ -0.26
ACTN1-207ENST00000553290 MKRN2Q9H000 416 aaKnown RBP13.43□□□□□ -0.26
ACTN1-207ENST00000553290 NUCKS1Q9H1E3 243 aaKnown RBP13.43□□□□□ -0.26
ACTN1-207ENST00000553290 SLC6A17Q9H1V8 727 aa13.43□□□□□ -0.26
ACTN1-207ENST00000553290 PDCL3Q9H2J4 239 aa13.43□□□□□ -0.26
ACTN1-207ENST00000553290 SYNCQ9H7C4 482 aa13.43□□□□□ -0.26
ACTN1-207ENST00000553290 FAM204AQ9H8W3 233 aa13.43□□□□□ -0.26
ACTN1-207ENST00000553290 PLCB1Q9NQ66 1216 aa13.43□□□□□ -0.26
ACTN1-207ENST00000553290 ITM2CQ9NQX7 267 aa13.43□□□□□ -0.26
ACTN1-207ENST00000553290 ANO10Q9NW15 660 aa13.43□□□□□ -0.26
ACTN1-207ENST00000553290 TAB2Q9NYJ8 693 aa13.43□□□□□ -0.26
ACTN1-207ENST00000553290 USP36Q9P275 1121 aaKnown RBP13.43□□□□□ -0.26
ACTN1-207ENST00000553290 PILRBQ9UKJ0 227 aa13.43□□□□□ -0.26
ACTN1-207ENST00000553290 GON4LQ3T8J9 2241 aa13.42□□□□□ -0.26
ACTN1-207ENST00000553290 KCNU1A8MYU2 1149 aa13.42□□□□□ -0.26
ACTN1-207ENST00000553290 PATE3B3GLJ2 98 aa13.42□□□□□ -0.26
ACTN1-207ENST00000553290 TM4SF5O14894 197 aa13.42□□□□□ -0.26
ACTN1-207ENST00000553290 MBD3O95983 291 aa13.42□□□□□ -0.26
ACTN1-207ENST00000553290 ERBB2P04626 1255 aa13.42□□□□□ -0.26
ACTN1-207ENST00000553290 ACADMP11310 421 aa13.42□□□□□ -0.26
ACTN1-207ENST00000553290 CYP11B1P15538 503 aa13.42□□□□□ -0.26
ACTN1-207ENST00000553290 ABCB4P21439 1286 aa13.42□□□□□ -0.26
ACTN1-207ENST00000553290 ITPKAP23677 461 aa13.42□□□□□ -0.26
ACTN1-207ENST00000553290 CD6P30203 668 aa13.42□□□□□ -0.26
ACTN1-207ENST00000553290 OXTRP30559 389 aa13.42□□□□□ -0.26
ACTN1-207ENST00000553290 CCR1P32246 355 aa13.42□□□□□ -0.26
ACTN1-207ENST00000553290 CD70P32970 193 aa13.42□□□□□ -0.26
ACTN1-207ENST00000553290 CDH5P33151 784 aaPredicted RBP13.42□□□□□ -0.26
ACTN1-207ENST00000553290 COPAP53621 1224 aa13.42□□□□□ -0.26
ACTN1-207ENST00000553290 RPS24P62847 133 aaKnown RBP13.42□□□□□ -0.26
ACTN1-207ENST00000553290 IRX4P78413 519 aa13.42□□□□□ -0.26
ACTN1-207ENST00000553290 SLC6A3Q01959 620 aa13.42□□□□□ -0.26
ACTN1-207ENST00000553290 ZNF33AQ06730 810 aa13.42□□□□□ -0.26
ACTN1-207ENST00000553290 LMAN2Q12907 356 aa13.42□□□□□ -0.26
ACTN1-207ENST00000553290 CAMK2GQ13555 558 aaPredicted RBP13.42□□□□□ -0.26
ACTN1-207ENST00000553290 CDH18Q13634 790 aa13.42□□□□□ -0.26
ACTN1-207ENST00000553290 TRIM61Q5EBN2 209 aa13.42□□□□□ -0.26
ACTN1-207ENST00000553290 PEAR1Q5VY43 1037 aaPredicted RBP13.42□□□□□ -0.26
ACTN1-207ENST00000553290 RAP1GAP2Q684P5 730 aa13.42□□□□□ -0.26
ACTN1-207ENST00000553290 OLFML1Q6UWY5 402 aa13.42□□□□□ -0.26
ACTN1-207ENST00000553290 FAM183BPQ6ZVS7 135 aa13.42□□□□□ -0.26
ACTN1-207ENST00000553290 SLC26A9Q7LBE3 791 aa13.42□□□□□ -0.26
ACTN1-207ENST00000553290 CHSY1Q86X52 802 aa13.42□□□□□ -0.26
ACTN1-207ENST00000553290 LGI2Q8N0V4 545 aa13.42□□□□□ -0.26
ACTN1-207ENST00000553290 CARNMT1Q8N4J0 409 aa13.42□□□□□ -0.26
ACTN1-207ENST00000553290 ZNF397Q8NF99 534 aaPredicted RBP13.42□□□□□ -0.26
ACTN1-207ENST00000553290 OR2T3Q8NH03 318 aa13.42□□□□□ -0.26
ACTN1-207ENST00000553290 CEP76Q8TAP6 659 aa13.42□□□□□ -0.26
ACTN1-207ENST00000553290 CYB5D2Q8WUJ1 264 aa13.42□□□□□ -0.26
ACTN1-207ENST00000553290 STK33Q9BYT3 514 aa13.42□□□□□ -0.26
ACTN1-207ENST00000553290 VPS16Q9H269 839 aa13.42□□□□□ -0.26
ACTN1-207ENST00000553290 TMEM245Q9H330 911 aa13.42□□□□□ -0.26
ACTN1-207ENST00000553290 FBRSQ9HAH7 460 aa13.42□□□□□ -0.26
ACTN1-207ENST00000553290 TMEM74BQ9NUR3 256 aa13.42□□□□□ -0.26
ACTN1-207ENST00000553290 DDIT4Q9NX09 232 aa13.42□□□□□ -0.26
ACTN1-207ENST00000553290 SUN2Q9UH99 717 aa13.42□□□□□ -0.26
ACTN1-207ENST00000553290 XPO7Q9UIA9 1087 aaKnown RBP13.42□□□□□ -0.26
ACTN1-207ENST00000553290 PI4KAP42356 2102 aa13.42□□□□□ -0.26
ACTN1-207ENST00000553290 F5H5T6 163 aa13.41□□□□□ -0.26
ACTN1-207ENST00000553290 DAB1O75553 588 aa13.41□□□□□ -0.26
ACTN1-207ENST00000553290 GRAP2O75791 330 aa13.41□□□□□ -0.26
ACTN1-207ENST00000553290 LUC7L3O95232 432 aaKnown RBP13.41□□□□□ -0.26
ACTN1-207ENST00000553290 MOCS3O95396 460 aa13.41□□□□□ -0.26
ACTN1-207ENST00000553290 ASLP04424 464 aa13.41□□□□□ -0.26
ACTN1-207ENST00000553290 HLA-EP13747 358 aa13.41□□□□□ -0.26
ACTN1-207ENST00000553290 TACR2P21452 398 aa13.41□□□□□ -0.26
ACTN1-207ENST00000553290 NOS2P35228 1153 aa13.41□□□□□ -0.26
ACTN1-207ENST00000553290 SCNN1AP37088 669 aa13.41□□□□□ -0.26
ACTN1-207ENST00000553290 TPMTP51580 245 aa13.41□□□□□ -0.26
ACTN1-207ENST00000553290 PITX1P78337 314 aaPredicted RBP13.41□□□□□ -0.26
ACTN1-207ENST00000553290 KRT31Q15323 416 aa13.41□□□□□ -0.26
ACTN1-207ENST00000553290 STX1AQ16623 288 aa13.41□□□□□ -0.26
ACTN1-207ENST00000553290 PTPRNQ16849 979 aa13.41□□□□□ -0.26
ACTN1-207ENST00000553290 DUOXA1Q1HG43 343 aa13.41□□□□□ -0.26
ACTN1-207ENST00000553290 PTPN20Q4JDL3 420 aa13.41□□□□□ -0.26
ACTN1-207ENST00000553290 PPM1JQ5JR12 505 aa13.41□□□□□ -0.26
ACTN1-207ENST00000553290 FKBP15Q5T1M5 1219 aa13.41□□□□□ -0.26
ACTN1-207ENST00000553290 SYCP2LQ5T4T6 812 aa13.41□□□□□ -0.26
ACTN1-207ENST00000553290 DAB2IPQ5VWQ8 1189 aa13.41□□□□□ -0.26
ACTN1-207ENST00000553290 SLC23A3Q6PIS1 610 aa13.41□□□□□ -0.26
ACTN1-207ENST00000553290 SLC41A1Q8IVJ1 513 aa13.41□□□□□ -0.26
ACTN1-207ENST00000553290 DEFB119Q8N690 84 aa13.41□□□□□ -0.26
ACTN1-207ENST00000553290 MSANTD4Q8NCY6 345 aa13.41□□□□□ -0.26
ACTN1-207ENST00000553290 ANKRD20A12PQ8NF67 263 aa13.41□□□□□ -0.26
ACTN1-207ENST00000553290 FOXJ1Q92949 421 aa13.41□□□□□ -0.26
ACTN1-207ENST00000553290 RNF34Q969K3 372 aa13.41□□□□□ -0.26
ACTN1-207ENST00000553290 TTC17Q96AE7 1141 aa13.41□□□□□ -0.26
ACTN1-207ENST00000553290 MYEOVQ96EZ4 313 aa13.41□□□□□ -0.26
ACTN1-207ENST00000553290 ZNF419Q96HQ0 510 aaPredicted RBP13.41□□□□□ -0.26
ACTN1-207ENST00000553290 LMLNQ96KR4 655 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms