RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 SFTPA1Q8IWL2 248 aa12.13□□□□□ -0.47
TRAFD1-209ENST00000552896 RPLP0P6Q8NHW5 317 aa12.13□□□□□ -0.47
TRAFD1-209ENST00000552896 KCNV2Q8TDN2 545 aa12.13□□□□□ -0.47
TRAFD1-209ENST00000552896 USP33Q8TEY7 942 aa12.13□□□□□ -0.47
TRAFD1-209ENST00000552896 RXFP2Q8WXD0 754 aa12.13□□□□□ -0.47
TRAFD1-209ENST00000552896 CENPIQ92674 756 aaPredicted RBP12.13□□□□□ -0.47
TRAFD1-209ENST00000552896 ZNF653Q96CK0 615 aa12.13□□□□□ -0.47
TRAFD1-209ENST00000552896 TMA16Q96EY4 203 aaKnown RBP12.13□□□□□ -0.47
TRAFD1-209ENST00000552896 PRMT1Q99873 361 aaKnown RBP12.13□□□□□ -0.47
TRAFD1-209ENST00000552896 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.13□□□□□ -0.47
TRAFD1-209ENST00000552896 IRF2BPLQ9H1B7 796 aa12.13□□□□□ -0.47
TRAFD1-209ENST00000552896 ZNHIT6Q9NWK9 470 aaKnown RBP12.13□□□□□ -0.47
TRAFD1-209ENST00000552896 ADAMTS1Q9UHI8 967 aa12.13□□□□□ -0.47
TRAFD1-209ENST00000552896 NENFQ9UMX5 172 aa12.13□□□□□ -0.47
TRAFD1-209ENST00000552896 CEP192Q8TEP8 1941 aa12.12□□□□□ -0.47
TRAFD1-209ENST00000552896 A0A087X0T9 212 aa12.12□□□□□ -0.47
TRAFD1-209ENST00000552896 GOLGA6L7A0A1B0GV03 622 aa12.12□□□□□ -0.47
TRAFD1-209ENST00000552896 TBC1D3BA6NDS4 549 aa12.12□□□□□ -0.47
TRAFD1-209ENST00000552896 AKR1B15C9JRZ8 316 aaPredicted RBP12.12□□□□□ -0.47
TRAFD1-209ENST00000552896 TSPAN3O60637 253 aa12.12□□□□□ -0.47
TRAFD1-209ENST00000552896 TBL1XO60907 577 aa12.12□□□□□ -0.47
TRAFD1-209ENST00000552896 PAGE1O75459 146 aa12.12□□□□□ -0.47
TRAFD1-209ENST00000552896 ADCY5O95622 1261 aa12.12□□□□□ -0.47
TRAFD1-209ENST00000552896 CISD3P0C7P0 127 aa12.12□□□□□ -0.47
TRAFD1-209ENST00000552896 FAM228BP0C875 321 aa12.12□□□□□ -0.47
TRAFD1-209ENST00000552896 EIF4A3P38919 411 aaKnown RBP12.12□□□□□ -0.47
TRAFD1-209ENST00000552896 KIR2DL1P43626 348 aaPredicted RBP12.12□□□□□ -0.47
TRAFD1-209ENST00000552896 SEC13P55735 322 aa12.12□□□□□ -0.47
TRAFD1-209ENST00000552896 RPL7AP62424 266 aaKnown RBP12.12□□□□□ -0.47
TRAFD1-209ENST00000552896 MRPS21P82921 87 aaKnown RBP12.12□□□□□ -0.47
TRAFD1-209ENST00000552896 MAMLD1Q13495 774 aa12.12□□□□□ -0.47
TRAFD1-209ENST00000552896 EIF4HQ15056 248 aaKnown RBP12.12□□□□□ -0.47
TRAFD1-209ENST00000552896 SLC18A3Q16572 532 aa12.12□□□□□ -0.47
TRAFD1-209ENST00000552896 CDO1Q16878 200 aa12.12□□□□□ -0.47
TRAFD1-209ENST00000552896 C15orf59Q2T9L4 293 aaPredicted RBP12.12□□□□□ -0.47
TRAFD1-209ENST00000552896 ZNF528Q3MIS6 628 aa12.12□□□□□ -0.47
TRAFD1-209ENST00000552896 RABGAP1LQ5R372 815 aa12.12□□□□□ -0.47
TRAFD1-209ENST00000552896 PKN3Q6P5Z2 889 aa12.12□□□□□ -0.47
TRAFD1-209ENST00000552896 DCUN1D2Q6PH85 259 aa12.12□□□□□ -0.47
TRAFD1-209ENST00000552896 MAML2Q8IZL2 1156 aaPredicted RBP12.12□□□□□ -0.47
TRAFD1-209ENST00000552896 LGI2Q8N0V4 545 aa12.12□□□□□ -0.47
TRAFD1-209ENST00000552896 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.12□□□□□ -0.47
TRAFD1-209ENST00000552896 WFIKKN2Q8TEU8 576 aa12.12□□□□□ -0.47
TRAFD1-209ENST00000552896 FNIP1Q8TF40 1166 aa12.12□□□□□ -0.47
TRAFD1-209ENST00000552896 FAM172AQ8WUF8 416 aa12.12□□□□□ -0.47
TRAFD1-209ENST00000552896 CNPY3Q9BT09 278 aa12.12□□□□□ -0.47
TRAFD1-209ENST00000552896 TKTL2Q9H0I9 626 aa12.12□□□□□ -0.47
TRAFD1-209ENST00000552896 WDCPQ9H6R7 721 aa12.12□□□□□ -0.47
TRAFD1-209ENST00000552896 CNOT8Q9UFF9 292 aaKnown RBP12.12□□□□□ -0.47
TRAFD1-209ENST00000552896 A0A1B0GVM2 712 aa12.11□□□□□ -0.47
TRAFD1-209ENST00000552896 TCAF2A6NFQ2 919 aa12.11□□□□□ -0.47
TRAFD1-209ENST00000552896 I6L893 689 aaPredicted RBP12.11□□□□□ -0.47
TRAFD1-209ENST00000552896 TRIM24O15164 1050 aa12.11□□□□□ -0.47
TRAFD1-209ENST00000552896 CCP110O43303 1012 aa12.11□□□□□ -0.47
TRAFD1-209ENST00000552896 LUC7L3O95232 432 aaKnown RBP12.11□□□□□ -0.47
TRAFD1-209ENST00000552896 TDGF1P13385 188 aa12.11□□□□□ -0.47
TRAFD1-209ENST00000552896 HLA-FP30511 346 aa12.11□□□□□ -0.47
TRAFD1-209ENST00000552896 CXCL12P48061 93 aa12.11□□□□□ -0.47
TRAFD1-209ENST00000552896 ATXN1P54253 815 aaKnown RBP12.11□□□□□ -0.47
TRAFD1-209ENST00000552896 ADKP55263 362 aaKnown RBP12.11□□□□□ -0.47
TRAFD1-209ENST00000552896 HDAC4P56524 1084 aa12.11□□□□□ -0.47
TRAFD1-209ENST00000552896 RPS24P62847 133 aaKnown RBP12.11□□□□□ -0.47
TRAFD1-209ENST00000552896 SATB1Q01826 763 aa12.11□□□□□ -0.47
TRAFD1-209ENST00000552896 CDH18Q13634 790 aa12.11□□□□□ -0.47
TRAFD1-209ENST00000552896 E2F5Q15329 346 aa12.11□□□□□ -0.47
TRAFD1-209ENST00000552896 ASTE1Q2TB18 679 aaPredicted RBP12.11□□□□□ -0.47
TRAFD1-209ENST00000552896 ALKBH5Q6P6C2 394 aaKnown RBP12.11□□□□□ -0.47
TRAFD1-209ENST00000552896 SYT13Q7L8C5 426 aa12.11□□□□□ -0.47
TRAFD1-209ENST00000552896 TRMT11Q7Z4G4 463 aaKnown RBP12.11□□□□□ -0.47
TRAFD1-209ENST00000552896 FAM131BQ86XD5 332 aa12.11□□□□□ -0.47
TRAFD1-209ENST00000552896 MFN1Q8IWA4 741 aa12.11□□□□□ -0.47
TRAFD1-209ENST00000552896 MYEOVQ96EZ4 313 aa12.11□□□□□ -0.47
TRAFD1-209ENST00000552896 HAPLN3Q96S86 360 aa12.11□□□□□ -0.47
TRAFD1-209ENST00000552896 DEF6Q9H4E7 631 aa12.11□□□□□ -0.47
TRAFD1-209ENST00000552896 MRPL47Q9HD33 250 aaKnown RBP12.11□□□□□ -0.47
TRAFD1-209ENST00000552896 CLEC4EQ9ULY5 219 aa12.11□□□□□ -0.47
TRAFD1-209ENST00000552896 MMP17Q9ULZ9 603 aa12.11□□□□□ -0.47
TRAFD1-209ENST00000552896 STARD13Q9Y3M8 1113 aa12.11□□□□□ -0.47
TRAFD1-209ENST00000552896 HS3ST4Q9Y661 456 aa12.11□□□□□ -0.47
TRAFD1-209ENST00000552896 PRRT4C9JH25 899 aa12.1□□□□□ -0.47
TRAFD1-209ENST00000552896 NPC1O15118 1278 aa12.1□□□□□ -0.47
TRAFD1-209ENST00000552896 PABPC1P11940 636 aaKnown RBP12.1□□□□□ -0.47
TRAFD1-209ENST00000552896 CDC25BP30305 580 aa12.1□□□□□ -0.47
TRAFD1-209ENST00000552896 HOXA6P31267 233 aa12.1□□□□□ -0.47
TRAFD1-209ENST00000552896 AIF1P55008 147 aa12.1□□□□□ -0.47
TRAFD1-209ENST00000552896 NRG1Q02297 640 aaPredicted RBP12.1□□□□□ -0.47
TRAFD1-209ENST00000552896 SCAPQ12770 1279 aa12.1□□□□□ -0.47
TRAFD1-209ENST00000552896 AUHQ13825 339 aaKnown RBP12.1□□□□□ -0.47
TRAFD1-209ENST00000552896 GEN1Q17RS7 908 aa12.1□□□□□ -0.47
TRAFD1-209ENST00000552896 ARL13BQ3SXY8 428 aa12.1□□□□□ -0.47
TRAFD1-209ENST00000552896 C5orf22Q49AR2 442 aa12.1□□□□□ -0.47
TRAFD1-209ENST00000552896 C2orf27AQ580R0 203 aa12.1□□□□□ -0.47
TRAFD1-209ENST00000552896 FBXL22Q6P050 247 aa12.1□□□□□ -0.47
TRAFD1-209ENST00000552896 CHST9Q7L1S5 443 aa12.1□□□□□ -0.47
TRAFD1-209ENST00000552896 KIAA0907Q7Z7F0 614 aaPredicted RBP12.1□□□□□ -0.47
TRAFD1-209ENST00000552896 DNAAF5Q86Y56 855 aa12.1□□□□□ -0.47
TRAFD1-209ENST00000552896 CCDC117Q8IWD4 279 aaPredicted RBP12.1□□□□□ -0.47
TRAFD1-209ENST00000552896 AHI1Q8N157 1196 aa12.1□□□□□ -0.47
TRAFD1-209ENST00000552896 ZNF513Q8N8E2 541 aaPredicted RBP12.1□□□□□ -0.47
TRAFD1-209ENST00000552896 TC2NQ8N9U0 490 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms