RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 CYB5D2Q8WUJ1 264 aa11.89□□□□□ -0.51
SUPT16H-202ENST00000552829 GOLGA1Q92805 767 aa11.89□□□□□ -0.51
SUPT16H-202ENST00000552829 ARID3AQ99856 593 aa11.89□□□□□ -0.51
SUPT16H-202ENST00000552829 RSPH9Q9H1X1 276 aaPredicted RBP11.89□□□□□ -0.51
SUPT16H-202ENST00000552829 PABPC3Q9H361 631 aaKnown RBP11.89□□□□□ -0.51
SUPT16H-202ENST00000552829 CLIC5Q9NZA1 410 aa11.89□□□□□ -0.51
SUPT16H-202ENST00000552829 SERGEFQ9UGK8 458 aa11.89□□□□□ -0.51
SUPT16H-202ENST00000552829 PCDHA5Q9Y5H7 936 aa11.89□□□□□ -0.51
SUPT16H-202ENST00000552829 NOTCH2Q04721 2471 aa11.89□□□□□ -0.51
SUPT16H-202ENST00000552829 COL27A1Q8IZC6 1860 aaPredicted RBP11.89□□□□□ -0.51
SUPT16H-202ENST00000552829 USP9YO00507 2555 aaPredicted RBP11.88□□□□□ -0.51
SUPT16H-202ENST00000552829 K7ENP7 123 aa11.88□□□□□ -0.51
SUPT16H-202ENST00000552829 BMP15O95972 392 aa11.88□□□□□ -0.51
SUPT16H-202ENST00000552829 KRT10P13645 584 aa11.88□□□□□ -0.51
SUPT16H-202ENST00000552829 IDEP14735 1019 aa11.88□□□□□ -0.51
SUPT16H-202ENST00000552829 HOXD9P28356 352 aaPredicted RBP11.88□□□□□ -0.51
SUPT16H-202ENST00000552829 ARRB1P49407 418 aaPredicted RBP11.88□□□□□ -0.51
SUPT16H-202ENST00000552829 CCR5P51681 352 aa11.88□□□□□ -0.51
SUPT16H-202ENST00000552829 TRPC3Q13507 836 aa11.88□□□□□ -0.51
SUPT16H-202ENST00000552829 TTC31Q49AM3 519 aaPredicted RBP11.88□□□□□ -0.51
SUPT16H-202ENST00000552829 ZNF776Q68DI1 518 aaPredicted RBP11.88□□□□□ -0.51
SUPT16H-202ENST00000552829 INO80CQ6PI98 192 aaPredicted RBP11.88□□□□□ -0.51
SUPT16H-202ENST00000552829 NCEH1Q6PIU2 408 aa11.88□□□□□ -0.51
SUPT16H-202ENST00000552829 IGF2-ASQ6U949 168 aa11.88□□□□□ -0.51
SUPT16H-202ENST00000552829 CCDC186Q7Z3E2 898 aa11.88□□□□□ -0.51
SUPT16H-202ENST00000552829 SPATS2Q86XZ4 545 aaKnown RBP11.88□□□□□ -0.51
SUPT16H-202ENST00000552829 LSMEM2Q8N112 164 aa11.88□□□□□ -0.51
SUPT16H-202ENST00000552829 C12orf29Q8N999 325 aa11.88□□□□□ -0.51
SUPT16H-202ENST00000552829 KCNE4Q8WWG9 221 aa11.88□□□□□ -0.51
SUPT16H-202ENST00000552829 ZSCAN16Q9H4T2 348 aaPredicted RBP11.88□□□□□ -0.51
SUPT16H-202ENST00000552829 PNPLA8Q9NP80 782 aa11.88□□□□□ -0.51
SUPT16H-202ENST00000552829 LMBRD1Q9NUN5 540 aa11.88□□□□□ -0.51
SUPT16H-202ENST00000552829 PANK4Q9NVE7 773 aa11.88□□□□□ -0.51
SUPT16H-202ENST00000552829 TFIP11Q9UBB9 837 aaKnown RBP11.88□□□□□ -0.51
SUPT16H-202ENST00000552829 SCML1Q9UN30 329 aa11.88□□□□□ -0.51
SUPT16H-202ENST00000552829 PLA2G4CQ9UP65 541 aa11.88□□□□□ -0.51
SUPT16H-202ENST00000552829 USP3Q9Y6I4 520 aa11.88□□□□□ -0.51
SUPT16H-202ENST00000552829 MYO9AB2RTY4 2548 aa11.88□□□□□ -0.51
SUPT16H-202ENST00000552829 NBASA2RRP1 2371 aa11.87□□□□□ -0.51
SUPT16H-202ENST00000552829 TLR4O00206 839 aa11.87□□□□□ -0.51
SUPT16H-202ENST00000552829 TRIM38O00635 465 aa11.87□□□□□ -0.51
SUPT16H-202ENST00000552829 KLK10O43240 276 aa11.87□□□□□ -0.51
SUPT16H-202ENST00000552829 TGFB1I1O43294 461 aa11.87□□□□□ -0.51
SUPT16H-202ENST00000552829 LZTS3O60299 673 aaPredicted RBP11.87□□□□□ -0.51
SUPT16H-202ENST00000552829 CYBBP04839 570 aa11.87□□□□□ -0.51
SUPT16H-202ENST00000552829 MPOP05164 745 aa11.87□□□□□ -0.51
SUPT16H-202ENST00000552829 DLDP09622 509 aaKnown RBP11.87□□□□□ -0.51
SUPT16H-202ENST00000552829 PTMSP20962 102 aa11.87□□□□□ -0.51
SUPT16H-202ENST00000552829 KRT85P78386 507 aa11.87□□□□□ -0.51
SUPT16H-202ENST00000552829 CEBPZQ03701 1054 aaKnown RBP11.87□□□□□ -0.51
SUPT16H-202ENST00000552829 ARID5AQ03989 594 aa11.87□□□□□ -0.51
SUPT16H-202ENST00000552829 TADA2BQ86TJ2 420 aa11.87□□□□□ -0.51
SUPT16H-202ENST00000552829 DENND1CQ8IV53 801 aa11.87□□□□□ -0.51
SUPT16H-202ENST00000552829 OXR1Q8N573 874 aa11.87□□□□□ -0.51
SUPT16H-202ENST00000552829 RDH13Q8NBN7 331 aa11.87□□□□□ -0.51
SUPT16H-202ENST00000552829 OR2T34Q8NGX1 318 aa11.87□□□□□ -0.51
SUPT16H-202ENST00000552829 DDI1Q8WTU0 396 aa11.87□□□□□ -0.51
SUPT16H-202ENST00000552829 CCDC127Q96BQ5 260 aa11.87□□□□□ -0.51
SUPT16H-202ENST00000552829 MYO19Q96H55 970 aa11.87□□□□□ -0.51
SUPT16H-202ENST00000552829 POLR1BQ9H9Y6 1135 aa11.87□□□□□ -0.51
SUPT16H-202ENST00000552829 FBXL12Q9NXK8 326 aa11.87□□□□□ -0.51
SUPT16H-202ENST00000552829 HMGXB4Q9UGU5 601 aa11.87□□□□□ -0.51
SUPT16H-202ENST00000552829 SUN2Q9UH99 717 aa11.87□□□□□ -0.51
SUPT16H-202ENST00000552829 NAGPAQ9UK23 515 aa11.87□□□□□ -0.51
SUPT16H-202ENST00000552829 NCKAP1Q9Y2A7 1128 aa11.87□□□□□ -0.51
SUPT16H-202ENST00000552829 SIGLEC6O43699 453 aa11.86□□□□□ -0.51
SUPT16H-202ENST00000552829 OPA1O60313 960 aa11.86□□□□□ -0.51
SUPT16H-202ENST00000552829 GADD45BO75293 160 aaPredicted RBP11.86□□□□□ -0.51
SUPT16H-202ENST00000552829 HMBSP08397 361 aa11.86□□□□□ -0.51
SUPT16H-202ENST00000552829 FAM200BP0CF97 657 aa11.86□□□□□ -0.51
SUPT16H-202ENST00000552829 RALAP11233 206 aa11.86□□□□□ -0.51
SUPT16H-202ENST00000552829 NDST1P52848 882 aa11.86□□□□□ -0.51
SUPT16H-202ENST00000552829 GABREP78334 506 aa11.86□□□□□ -0.51
SUPT16H-202ENST00000552829 ZNF211Q13398 564 aaPredicted RBP11.86□□□□□ -0.51
SUPT16H-202ENST00000552829 ZNF699Q32M78 642 aa11.86□□□□□ -0.51
SUPT16H-202ENST00000552829 ZNF667Q5HYK9 610 aa11.86□□□□□ -0.51
SUPT16H-202ENST00000552829 KIAA1614Q5VZ46 1190 aa11.86□□□□□ -0.51
SUPT16H-202ENST00000552829 RRAGBQ5VZM2 374 aa11.86□□□□□ -0.51
SUPT16H-202ENST00000552829 CHST9Q7L1S5 443 aa11.86□□□□□ -0.51
SUPT16H-202ENST00000552829 EPM2AIP1Q7L775 607 aaPredicted RBP11.86□□□□□ -0.51
SUPT16H-202ENST00000552829 PRICKLE2Q7Z3G6 844 aa11.86□□□□□ -0.51
SUPT16H-202ENST00000552829 UNC93AQ86WB7 457 aa11.86□□□□□ -0.51
SUPT16H-202ENST00000552829 EXD3Q8N9H8 876 aa11.86□□□□□ -0.51
SUPT16H-202ENST00000552829 MFSD2AQ8NA29 543 aa11.86□□□□□ -0.51
SUPT16H-202ENST00000552829 PLEKHO2Q8TD55 490 aa11.86□□□□□ -0.51
SUPT16H-202ENST00000552829 ELMO3Q96BJ8 720 aa11.86□□□□□ -0.51
SUPT16H-202ENST00000552829 CDK5RAP1Q96SZ6 601 aaKnown RBP11.86□□□□□ -0.51
SUPT16H-202ENST00000552829 NEUROG2Q9H2A3 272 aa11.86□□□□□ -0.51
SUPT16H-202ENST00000552829 MTG2Q9H4K7 406 aa11.86□□□□□ -0.51
SUPT16H-202ENST00000552829 AASDHPPTQ9NRN7 309 aa11.86□□□□□ -0.51
SUPT16H-202ENST00000552829 AGPAT3Q9NRZ7 376 aa11.86□□□□□ -0.51
SUPT16H-202ENST00000552829 FAM49BQ9NUQ9 324 aa11.86□□□□□ -0.51
SUPT16H-202ENST00000552829 CCDC39Q9UFE4 941 aa11.86□□□□□ -0.51
SUPT16H-202ENST00000552829 RP1P56715 2156 aa11.86□□□□□ -0.51
SUPT16H-202ENST00000552829 NBPF19A0A087WUL8 3843 aa11.85□□□□□ -0.51
SUPT16H-202ENST00000552829 NYNRINQ9P2P1 1898 aaKnown RBP11.85□□□□□ -0.51
SUPT16H-202ENST00000552829 A0A1W2PNU3 283 aaPredicted RBP11.85□□□□□ -0.51
SUPT16H-202ENST00000552829 FAM47DPA6NHR8 397 aa11.85□□□□□ -0.51
SUPT16H-202ENST00000552829 LRRC72A6NJI9 287 aa11.85□□□□□ -0.51
SUPT16H-202ENST00000552829 LATO43561 262 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms