RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 CAPNS2Q96L46 248 aa14.43□□□□□ -0.1
RAB3IP-216ENST00000552199 KLF6Q99612 283 aaPredicted RBP14.43□□□□□ -0.1
RAB3IP-216ENST00000552199 TRIM62Q9BVG3 475 aa14.43□□□□□ -0.1
RAB3IP-216ENST00000552199 TKTL2Q9H0I9 626 aa14.43□□□□□ -0.1
RAB3IP-216ENST00000552199 PCDHA11Q9Y5I1 949 aa14.43□□□□□ -0.1
RAB3IP-216ENST00000552199 F5H423 210 aaPredicted RBP14.43□□□□□ -0.1
RAB3IP-216ENST00000552199 GOLGA8RI6L899 631 aa14.43□□□□□ -0.1
RAB3IP-216ENST00000552199 TM9SF1O15321 606 aa14.43□□□□□ -0.1
RAB3IP-216ENST00000552199 NCAM2O15394 837 aa14.43□□□□□ -0.1
RAB3IP-216ENST00000552199 YWHAHQ04917 246 aaPredicted RBP14.43□□□□□ -0.1
RAB3IP-216ENST00000552199 SLC18A2Q05940 514 aa14.43□□□□□ -0.1
RAB3IP-216ENST00000552199 DSC1Q08554 894 aa14.43□□□□□ -0.1
RAB3IP-216ENST00000552199 SPRED3Q2MJR0 410 aa14.43□□□□□ -0.1
RAB3IP-216ENST00000552199 NOMO2Q5JPE7 1267 aa14.43□□□□□ -0.1
RAB3IP-216ENST00000552199 CLLU1OSQ5K130 101 aa14.43□□□□□ -0.1
RAB3IP-216ENST00000552199 C4orf50Q6ZRC1 276 aa14.43□□□□□ -0.1
RAB3IP-216ENST00000552199 SH2D5Q6ZV89 423 aa14.43□□□□□ -0.1
RAB3IP-216ENST00000552199 TRPM8Q7Z2W7 1104 aa14.43□□□□□ -0.1
RAB3IP-216ENST00000552199 SPATA2LQ8IUW3 424 aaPredicted RBP14.43□□□□□ -0.1
RAB3IP-216ENST00000552199 PDCD7Q8N8D1 485 aaKnown RBP14.43□□□□□ -0.1
RAB3IP-216ENST00000552199 SCAMP5Q8TAC9 235 aa14.43□□□□□ -0.1
RAB3IP-216ENST00000552199 GSDMBQ8TAX9 411 aa14.43□□□□□ -0.1
RAB3IP-216ENST00000552199 TCP10LQ8TDR4 215 aa14.43□□□□□ -0.1
RAB3IP-216ENST00000552199 DQX1Q8TE96 717 aaKnown RBP14.43□□□□□ -0.1
RAB3IP-216ENST00000552199 PXYLP1Q8TE99 480 aa14.43□□□□□ -0.1
RAB3IP-216ENST00000552199 SERAC1Q96JX3 654 aa14.43□□□□□ -0.1
RAB3IP-216ENST00000552199 EPAS1Q99814 870 aa14.43□□□□□ -0.1
RAB3IP-216ENST00000552199 CFHR5Q9BXR6 569 aa14.43□□□□□ -0.1
RAB3IP-216ENST00000552199 CEP41Q9BYV8 373 aa14.43□□□□□ -0.1
RAB3IP-216ENST00000552199 PITPNM3Q9BZ71 974 aa14.43□□□□□ -0.1
RAB3IP-216ENST00000552199 BRD8Q9H0E9 1235 aa14.43□□□□□ -0.1
RAB3IP-216ENST00000552199 GPBP1L1Q9HC44 474 aaPredicted RBP14.43□□□□□ -0.1
RAB3IP-216ENST00000552199 SMYD2Q9NRG4 433 aa14.43□□□□□ -0.1
RAB3IP-216ENST00000552199 IGSF9Q9P2J2 1179 aa14.43□□□□□ -0.1
RAB3IP-216ENST00000552199 OR12D3Q9UGF7 316 aa14.43□□□□□ -0.1
RAB3IP-216ENST00000552199 PRKAG3Q9UGI9 489 aa14.43□□□□□ -0.1
RAB3IP-216ENST00000552199 ARL2BPQ9Y2Y0 163 aa14.43□□□□□ -0.1
RAB3IP-216ENST00000552199 SNX10Q9Y5X0 201 aa14.43□□□□□ -0.1
RAB3IP-216ENST00000552199 CAPN7Q9Y6W3 813 aa14.43□□□□□ -0.1
RAB3IP-216ENST00000552199 FAM159BA6NKW6 160 aa14.42□□□□□ -0.1
RAB3IP-216ENST00000552199 FAM155BO75949 473 aa14.42□□□□□ -0.1
RAB3IP-216ENST00000552199 IGLV3-25P01717 112 aa14.42□□□□□ -0.1
RAB3IP-216ENST00000552199 PSMB4P28070 264 aa14.42□□□□□ -0.1
RAB3IP-216ENST00000552199 DEFB115Q30KQ5 88 aa14.42□□□□□ -0.1
RAB3IP-216ENST00000552199 LHX8Q68G74 356 aa14.42□□□□□ -0.1
RAB3IP-216ENST00000552199 CYS1Q717R9 158 aa14.42□□□□□ -0.1
RAB3IP-216ENST00000552199 PID1Q7Z2X4 250 aa14.42□□□□□ -0.1
RAB3IP-216ENST00000552199 URGCPQ8TCY9 931 aa14.42□□□□□ -0.1
RAB3IP-216ENST00000552199 LRRC8CQ8TDW0 803 aa14.42□□□□□ -0.1
RAB3IP-216ENST00000552199 PLCD4Q9BRC7 762 aa14.42□□□□□ -0.1
RAB3IP-216ENST00000552199 A0A1W2PQ45 241 aaPredicted RBP14.41□□□□□ -0.1
RAB3IP-216ENST00000552199 A0A1W2PQY0 241 aa14.41□□□□□ -0.1
RAB3IP-216ENST00000552199 SDR42E2A6NKP2 422 aa14.41□□□□□ -0.1
RAB3IP-216ENST00000552199 TMEM189-UBE2V1I3L0A0 370 aa14.41□□□□□ -0.1
RAB3IP-216ENST00000552199 TNFRSF10BO14763 440 aa14.41□□□□□ -0.1
RAB3IP-216ENST00000552199 KRT37O76014 449 aa14.41□□□□□ -0.1
RAB3IP-216ENST00000552199 SNRPAP09012 282 aaKnown RBP14.41□□□□□ -0.1
RAB3IP-216ENST00000552199 GRIK1P39086 918 aa14.41□□□□□ -0.1
RAB3IP-216ENST00000552199 PPIDQ08752 370 aaKnown RBP14.41□□□□□ -0.1
RAB3IP-216ENST00000552199 IFRD2Q12894 506 aaPredicted RBP14.41□□□□□ -0.1
RAB3IP-216ENST00000552199 DNAJC3Q13217 504 aa14.41□□□□□ -0.1
RAB3IP-216ENST00000552199 EIF4EBP2Q13542 120 aaPredicted RBP14.41□□□□□ -0.1
RAB3IP-216ENST00000552199 SEPT7Q16181 437 aaKnown RBP14.41□□□□□ -0.1
RAB3IP-216ENST00000552199 LGSNQ5TDP6 509 aa14.41□□□□□ -0.1
RAB3IP-216ENST00000552199 STEAP4Q687X5 459 aa14.41□□□□□ -0.1
RAB3IP-216ENST00000552199 FAM47EQ6ZV65 393 aa14.41□□□□□ -0.1
RAB3IP-216ENST00000552199 COLGALT2Q8IYK4 626 aa14.41□□□□□ -0.1
RAB3IP-216ENST00000552199 NPWQ8N729 165 aa14.41□□□□□ -0.1
RAB3IP-216ENST00000552199 RNF34Q969K3 372 aa14.41□□□□□ -0.1
RAB3IP-216ENST00000552199 STAMBPL1Q96FJ0 436 aa14.41□□□□□ -0.1
RAB3IP-216ENST00000552199 TRIM56Q9BRZ2 755 aaKnown RBP14.41□□□□□ -0.1
RAB3IP-216ENST00000552199 OSBPL2Q9H1P3 480 aa14.41□□□□□ -0.1
RAB3IP-216ENST00000552199 STARD13Q9Y3M8 1113 aa14.41□□□□□ -0.1
RAB3IP-216ENST00000552199 WDR27A2RRH5 827 aa14.41□□□□□ -0.1
RAB3IP-216ENST00000552199 TRIM49D1C9J1S8 452 aa14.41□□□□□ -0.1
RAB3IP-216ENST00000552199 KCNK1O00180 336 aa14.41□□□□□ -0.1
RAB3IP-216ENST00000552199 TRPA1O75762 1119 aa14.41□□□□□ -0.1
RAB3IP-216ENST00000552199 LRIG2O94898 1065 aa14.41□□□□□ -0.1
RAB3IP-216ENST00000552199 PYGBP11216 843 aa14.41□□□□□ -0.1
RAB3IP-216ENST00000552199 ALADP13716 330 aa14.41□□□□□ -0.1
RAB3IP-216ENST00000552199 MX2P20592 715 aa14.41□□□□□ -0.1
RAB3IP-216ENST00000552199 ADRA1DP25100 572 aa14.41□□□□□ -0.1
RAB3IP-216ENST00000552199 PTPN3P26045 913 aa14.41□□□□□ -0.1
RAB3IP-216ENST00000552199 EPHB2P29323 1055 aa14.41□□□□□ -0.1
RAB3IP-216ENST00000552199 CYP2C18P33260 490 aa14.41□□□□□ -0.1
RAB3IP-216ENST00000552199 SCTRP47872 440 aa14.41□□□□□ -0.1
RAB3IP-216ENST00000552199 NEK3P51956 506 aa14.41□□□□□ -0.1
RAB3IP-216ENST00000552199 SLC5A3P53794 718 aa14.41□□□□□ -0.1
RAB3IP-216ENST00000552199 GALNT2Q10471 571 aa14.41□□□□□ -0.1
RAB3IP-216ENST00000552199 TRMT10BQ6PF06 316 aaKnown RBP14.41□□□□□ -0.1
RAB3IP-216ENST00000552199 SPOCK2Q92563 424 aa14.41□□□□□ -0.1
RAB3IP-216ENST00000552199 ZNF75CPQ92670 426 aaPredicted RBP14.41□□□□□ -0.1
RAB3IP-216ENST00000552199 HDAC11Q96DB2 347 aa14.41□□□□□ -0.1
RAB3IP-216ENST00000552199 APOPT1Q96IL0 206 aa14.41□□□□□ -0.1
RAB3IP-216ENST00000552199 ABCC13Q9NSE7 274 aa14.41□□□□□ -0.1
RAB3IP-216ENST00000552199 ABCF3Q9NUQ8 709 aa14.41□□□□□ -0.1
RAB3IP-216ENST00000552199 MOCS1Q9NZB8 636 aa14.41□□□□□ -0.1
RAB3IP-216ENST00000552199 KLHL8Q9P2G9 620 aaPredicted RBP14.41□□□□□ -0.1
RAB3IP-216ENST00000552199 KANSL3Q9P2N6 904 aa14.41□□□□□ -0.1
RAB3IP-216ENST00000552199 SLC17A7Q9P2U7 560 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms