RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 CDK5RAP3Q96JB5 506 aa5.68□□□□□ -1.5
HOXB3-213ENST00000552000 CEP295NLQ96MC4 621 aa5.68□□□□□ -1.5
HOXB3-213ENST00000552000 XPO6Q96QU8 1125 aaKnown RBP5.68□□□□□ -1.5
HOXB3-213ENST00000552000 FIZ1Q96SL8 496 aa5.68□□□□□ -1.5
HOXB3-213ENST00000552000 LGMNQ99538 433 aa5.68□□□□□ -1.5
HOXB3-213ENST00000552000 FAM213AQ9BRX8 229 aa5.68□□□□□ -1.5
HOXB3-213ENST00000552000 NUP58Q9BVL2 599 aa5.68□□□□□ -1.5
HOXB3-213ENST00000552000 NRSN2Q9GZP1 204 aa5.68□□□□□ -1.5
HOXB3-213ENST00000552000 C6orf106Q9H6K1 298 aaPredicted RBP5.68□□□□□ -1.5
HOXB3-213ENST00000552000 CCSER2Q9H7U1 834 aa5.68□□□□□ -1.5
HOXB3-213ENST00000552000 TM9SF3Q9HD45 589 aa5.68□□□□□ -1.5
HOXB3-213ENST00000552000 TMEM30AQ9NV96 361 aa5.68□□□□□ -1.5
HOXB3-213ENST00000552000 KCND2Q9NZV8 630 aa5.68□□□□□ -1.5
HOXB3-213ENST00000552000 CHORDC1Q9UHD1 332 aaPredicted RBP5.68□□□□□ -1.5
HOXB3-213ENST00000552000 SIX4Q9UIU6 781 aa5.68□□□□□ -1.5
HOXB3-213ENST00000552000 ODF2LQ9ULJ1 636 aa5.68□□□□□ -1.5
HOXB3-213ENST00000552000 PCDHGA1Q9Y5H4 931 aa5.68□□□□□ -1.5
HOXB3-213ENST00000552000 STYXL1Q9Y6J8 313 aa5.68□□□□□ -1.5
HOXB3-213ENST00000552000 STON1Q9Y6Q2 735 aa5.68□□□□□ -1.5
HOXB3-213ENST00000552000 HIVEP3Q5T1R4 2406 aa5.68□□□□□ -1.5
HOXB3-213ENST00000552000 PLXNA2O75051 1894 aa5.68□□□□□ -1.5
HOXB3-213ENST00000552000 RELNP78509 3460 aa5.67□□□□□ -1.5
HOXB3-213ENST00000552000 GOLGA8IPA6NC78 632 aa5.67□□□□□ -1.5
HOXB3-213ENST00000552000 GOLGA8JA6NMD2 632 aa5.67□□□□□ -1.5
HOXB3-213ENST00000552000 CLDN5O00501 218 aa5.67□□□□□ -1.5
HOXB3-213ENST00000552000 LAD1O00515 517 aa5.67□□□□□ -1.5
HOXB3-213ENST00000552000 SYNCRIPO60506 623 aaKnown RBP5.67□□□□□ -1.5
HOXB3-213ENST00000552000 TBCAO75347 108 aaKnown RBP5.67□□□□□ -1.5
HOXB3-213ENST00000552000 LDOC1O95751 146 aaPredicted RBP5.67□□□□□ -1.5
HOXB3-213ENST00000552000 TBX18O95935 607 aa5.67□□□□□ -1.5
HOXB3-213ENST00000552000 KRT18P05783 430 aaKnown RBP5.67□□□□□ -1.5
HOXB3-213ENST00000552000 TMEM191BP0C7N4 346 aa5.67□□□□□ -1.5
HOXB3-213ENST00000552000 CISD3P0C7P0 127 aa5.67□□□□□ -1.5
HOXB3-213ENST00000552000 ACADMP11310 421 aa5.67□□□□□ -1.5
HOXB3-213ENST00000552000 SCP2P22307 547 aa5.67□□□□□ -1.5
HOXB3-213ENST00000552000 ACTN2P35609 894 aa5.67□□□□□ -1.5
HOXB3-213ENST00000552000 CTSKP43235 329 aa5.67□□□□□ -1.5
HOXB3-213ENST00000552000 GRIA4P48058 902 aa5.67□□□□□ -1.5
HOXB3-213ENST00000552000 ZNF131P52739 623 aa5.67□□□□□ -1.5
HOXB3-213ENST00000552000 RBP5P82980 135 aa5.67□□□□□ -1.5
HOXB3-213ENST00000552000 POU5F1Q01860 360 aaKnown RBP5.67□□□□□ -1.5
HOXB3-213ENST00000552000 POSTNQ15063 836 aa5.67□□□□□ -1.5
HOXB3-213ENST00000552000 TBC1D25Q3MII6 688 aa5.67□□□□□ -1.5
HOXB3-213ENST00000552000 TMEM119Q4V9L6 283 aa5.67□□□□□ -1.5
HOXB3-213ENST00000552000 CENPQQ7L2Z9 268 aaPredicted RBP5.67□□□□□ -1.5
HOXB3-213ENST00000552000 LIMS2Q7Z4I7 341 aa5.67□□□□□ -1.5
HOXB3-213ENST00000552000 ADAT2Q7Z6V5 191 aaKnown RBP5.67□□□□□ -1.5
HOXB3-213ENST00000552000 ERICH1Q86X53 443 aa5.67□□□□□ -1.5
HOXB3-213ENST00000552000 PDZD8Q8NEN9 1154 aa5.67□□□□□ -1.5
HOXB3-213ENST00000552000 SCAMP5Q8TAC9 235 aa5.67□□□□□ -1.5
HOXB3-213ENST00000552000 MYCBPAPQ8TBZ2 947 aa5.67□□□□□ -1.5
HOXB3-213ENST00000552000 NOC3LQ8WTT2 800 aaKnown RBP5.67□□□□□ -1.5
HOXB3-213ENST00000552000 PRCCQ92733 491 aaPredicted RBP5.67□□□□□ -1.5
HOXB3-213ENST00000552000 GLMNQ92990 594 aa5.67□□□□□ -1.5
HOXB3-213ENST00000552000 WBP1Q96G27 269 aa5.67□□□□□ -1.5
HOXB3-213ENST00000552000 HPDLQ96IR7 371 aa5.67□□□□□ -1.5
HOXB3-213ENST00000552000 CNDP2Q96KP4 475 aaKnown RBP5.67□□□□□ -1.5
HOXB3-213ENST00000552000 C8orf48Q96LL4 319 aa5.67□□□□□ -1.5
HOXB3-213ENST00000552000 MMS19Q96T76 1030 aa5.67□□□□□ -1.5
HOXB3-213ENST00000552000 SSBP4Q9BWG4 385 aaPredicted RBP5.67□□□□□ -1.5
HOXB3-213ENST00000552000 TRIM4Q9C037 500 aa5.67□□□□□ -1.5
HOXB3-213ENST00000552000 ZNF518BQ9C0D4 1074 aa5.67□□□□□ -1.5
HOXB3-213ENST00000552000 MTMR12Q9C0I1 747 aa5.67□□□□□ -1.5
HOXB3-213ENST00000552000 NACA2Q9H009 215 aa5.67□□□□□ -1.5
HOXB3-213ENST00000552000 GDPD2Q9HCC8 539 aa5.67□□□□□ -1.5
HOXB3-213ENST00000552000 CPNE5Q9HCH3 593 aa5.67□□□□□ -1.5
HOXB3-213ENST00000552000 PDE11AQ9HCR9 933 aa5.67□□□□□ -1.5
HOXB3-213ENST00000552000 PLK2Q9NYY3 685 aa5.67□□□□□ -1.5
HOXB3-213ENST00000552000 WDR35Q9P2L0 1181 aa5.67□□□□□ -1.5
HOXB3-213ENST00000552000 THAP10Q9P2Z0 257 aaPredicted RBP5.67□□□□□ -1.5
HOXB3-213ENST00000552000 ITGA11Q9UKX5 1188 aa5.67□□□□□ -1.5
HOXB3-213ENST00000552000 ZNF232Q9UNY5 417 aa5.67□□□□□ -1.5
HOXB3-213ENST00000552000 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.67□□□□□ -1.5
HOXB3-213ENST00000552000 R3HCC1Q9Y3T6 440 aaKnown RBP5.67□□□□□ -1.5
HOXB3-213ENST00000552000 GPC6Q9Y625 555 aaPredicted RBP5.67□□□□□ -1.5
HOXB3-213ENST00000552000 USP3Q9Y6I4 520 aa5.67□□□□□ -1.5
HOXB3-213ENST00000552000 PTPRJQ12913 1337 aa5.67□□□□□ -1.5
HOXB3-213ENST00000552000 CRYBG3Q68DQ2 2970 aa5.67□□□□□ -1.5
HOXB3-213ENST00000552000 SDK2Q58EX2 2172 aa5.66□□□□□ -1.5
HOXB3-213ENST00000552000 A0A1B0GTQ1 180 aa5.66□□□□□ -1.5
HOXB3-213ENST00000552000 VWA3AA6NCI4 1184 aa5.66□□□□□ -1.5
HOXB3-213ENST00000552000 POM121CA8CG34 1229 aa5.66□□□□□ -1.5
HOXB3-213ENST00000552000 TMEM229AB2RXF0 380 aa5.66□□□□□ -1.5
HOXB3-213ENST00000552000 GREM1O60565 184 aa5.66□□□□□ -1.5
HOXB3-213ENST00000552000 FSBPO95073 299 aa5.66□□□□□ -1.5
HOXB3-213ENST00000552000 RTN3O95197 1032 aaPredicted RBP5.66□□□□□ -1.5
HOXB3-213ENST00000552000 IGLV3-19P01714 112 aa5.66□□□□□ -1.5
HOXB3-213ENST00000552000 C1SP09871 688 aa5.66□□□□□ -1.5
HOXB3-213ENST00000552000 GLDCP23378 1020 aa5.66□□□□□ -1.5
HOXB3-213ENST00000552000 WARSP23381 471 aaKnown RBP5.66□□□□□ -1.5
HOXB3-213ENST00000552000 ACSL1P33121 698 aa5.66□□□□□ -1.5
HOXB3-213ENST00000552000 PRPHP41219 470 aa5.66□□□□□ -1.5
HOXB3-213ENST00000552000 ACADVLP49748 655 aa5.66□□□□□ -1.5
HOXB3-213ENST00000552000 PGFP49763 221 aa5.66□□□□□ -1.5
HOXB3-213ENST00000552000 CSRP3P50461 194 aa5.66□□□□□ -1.5
HOXB3-213ENST00000552000 CDH8P55286 799 aa5.66□□□□□ -1.5
HOXB3-213ENST00000552000 C21orf59P57076 290 aa5.66□□□□□ -1.5
HOXB3-213ENST00000552000 TMPRSS3P57727 454 aa5.66□□□□□ -1.5
HOXB3-213ENST00000552000 ORC1Q13415 861 aa5.66□□□□□ -1.5
HOXB3-213ENST00000552000 COLEC12Q5KU26 742 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms