RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 CBFA2T2O43439 604 aa15.96■□□□□ 0.15
PRPF40B-211ENST00000551063 ALDH1A2O94788 518 aa15.96■□□□□ 0.15
PRPF40B-211ENST00000551063 HLA-FP30511 346 aa15.96■□□□□ 0.15
PRPF40B-211ENST00000551063 RDXP35241 583 aaKnown RBP15.96■□□□□ 0.15
PRPF40B-211ENST00000551063 CXCR3P49682 368 aa15.96■□□□□ 0.15
PRPF40B-211ENST00000551063 RPS24P62847 133 aaKnown RBP15.96■□□□□ 0.15
PRPF40B-211ENST00000551063 DEUP1Q05D60 604 aa15.96■□□□□ 0.15
PRPF40B-211ENST00000551063 ACBD5Q5T8D3 534 aaPredicted RBP15.96■□□□□ 0.15
PRPF40B-211ENST00000551063 RAP1GAP2Q684P5 730 aa15.96■□□□□ 0.15
PRPF40B-211ENST00000551063 SDE2Q6IQ49 451 aa15.96■□□□□ 0.15
PRPF40B-211ENST00000551063 SND1Q7KZF4 910 aaKnown RBP eCLIP15.96■□□□□ 0.15
PRPF40B-211ENST00000551063 KIAA0907Q7Z7F0 614 aaPredicted RBP15.96■□□□□ 0.15
PRPF40B-211ENST00000551063 MFN1Q8IWA4 741 aa15.96■□□□□ 0.15
PRPF40B-211ENST00000551063 CCDC117Q8IWD4 279 aaPredicted RBP15.96■□□□□ 0.15
PRPF40B-211ENST00000551063 CHPFQ8IZ52 775 aa15.96■□□□□ 0.15
PRPF40B-211ENST00000551063 AHI1Q8N157 1196 aa15.96■□□□□ 0.15
PRPF40B-211ENST00000551063 DCLK2Q8N568 766 aa15.96■□□□□ 0.15
PRPF40B-211ENST00000551063 SYN2Q92777 582 aaPredicted RBP15.96■□□□□ 0.15
PRPF40B-211ENST00000551063 TBCBQ99426 244 aa15.96■□□□□ 0.15
PRPF40B-211ENST00000551063 PRMT1Q99873 361 aaKnown RBP15.96■□□□□ 0.15
PRPF40B-211ENST00000551063 GABRG3Q99928 467 aa15.96■□□□□ 0.15
PRPF40B-211ENST00000551063 ADAM33Q9BZ11 813 aa15.96■□□□□ 0.15
PRPF40B-211ENST00000551063 HAUS4Q9H6D7 363 aa15.96■□□□□ 0.15
PRPF40B-211ENST00000551063 PIGVQ9NUD9 493 aa15.96■□□□□ 0.15
PRPF40B-211ENST00000551063 ELOVL2Q9NXB9 296 aa15.96■□□□□ 0.15
PRPF40B-211ENST00000551063 ARHGEF38Q9NXL2 777 aa15.96■□□□□ 0.15
PRPF40B-211ENST00000551063 CALCOCO1Q9P1Z2 691 aa15.96■□□□□ 0.15
PRPF40B-211ENST00000551063 GGA2Q9UJY4 613 aa15.96■□□□□ 0.15
PRPF40B-211ENST00000551063 VPS13AQ96RL7 3174 aa15.95■□□□□ 0.14
PRPF40B-211ENST00000551063 TIMM44O43615 452 aa15.95■□□□□ 0.14
PRPF40B-211ENST00000551063 PABPC1P11940 636 aaKnown RBP15.95■□□□□ 0.14
PRPF40B-211ENST00000551063 HOXB2P14652 356 aa15.95■□□□□ 0.14
PRPF40B-211ENST00000551063 TFE3P19532 575 aaPredicted RBP15.95■□□□□ 0.14
PRPF40B-211ENST00000551063 TNFAIP3P21580 790 aa15.95■□□□□ 0.14
PRPF40B-211ENST00000551063 HOXC13P31276 330 aa15.95■□□□□ 0.14
PRPF40B-211ENST00000551063 SDC4P31431 198 aa15.95■□□□□ 0.14
PRPF40B-211ENST00000551063 ZBED6P86452 979 aa15.95■□□□□ 0.14
PRPF40B-211ENST00000551063 KLHL30Q0D2K2 578 aa15.95■□□□□ 0.14
PRPF40B-211ENST00000551063 CDH18Q13634 790 aa15.95■□□□□ 0.14
PRPF40B-211ENST00000551063 RABGAP1LQ5R372 815 aa15.95■□□□□ 0.14
PRPF40B-211ENST00000551063 ACAD10Q6JQN1 1059 aa15.95■□□□□ 0.14
PRPF40B-211ENST00000551063 TRNP1Q6NT89 227 aa15.95■□□□□ 0.14
PRPF40B-211ENST00000551063 TMEM92Q6UXU6 159 aa15.95■□□□□ 0.14
PRPF40B-211ENST00000551063 LGI2Q8N0V4 545 aa15.95■□□□□ 0.14
PRPF40B-211ENST00000551063 FIBINQ8TAL6 211 aa15.95■□□□□ 0.14
PRPF40B-211ENST00000551063 RMDN1Q96DB5 314 aa15.95■□□□□ 0.14
PRPF40B-211ENST00000551063 MYEOVQ96EZ4 313 aa15.95■□□□□ 0.14
PRPF40B-211ENST00000551063 VCPIP1Q96JH7 1222 aa15.95■□□□□ 0.14
PRPF40B-211ENST00000551063 SELENOOQ9BVL4 669 aa15.95■□□□□ 0.14
PRPF40B-211ENST00000551063 XPO4Q9C0E2 1151 aaKnown RBP15.95■□□□□ 0.14
PRPF40B-211ENST00000551063 WDCPQ9H6R7 721 aa15.95■□□□□ 0.14
PRPF40B-211ENST00000551063 ZDHHC4Q9NPG8 344 aa15.95■□□□□ 0.14
PRPF40B-211ENST00000551063 ABCB8Q9NUT2 735 aa15.95■□□□□ 0.14
PRPF40B-211ENST00000551063 THAP10Q9P2Z0 257 aaPredicted RBP15.95■□□□□ 0.14
PRPF40B-211ENST00000551063 CAPN11Q9UMQ6 739 aa15.95■□□□□ 0.14
PRPF40B-211ENST00000551063 SMG5Q9UPR3 1016 aaKnown RBP15.95■□□□□ 0.14
PRPF40B-211ENST00000551063 C2CD4BA6NLJ0 364 aa15.94■□□□□ 0.14
PRPF40B-211ENST00000551063 PAGE1O75459 146 aa15.94■□□□□ 0.14
PRPF40B-211ENST00000551063 ENDOD1O94919 500 aa15.94■□□□□ 0.14
PRPF40B-211ENST00000551063 LUC7L3O95232 432 aaKnown RBP15.94■□□□□ 0.14
PRPF40B-211ENST00000551063 KRT3P12035 628 aa15.94■□□□□ 0.14
PRPF40B-211ENST00000551063 PTPN9P43378 593 aa15.94■□□□□ 0.14
PRPF40B-211ENST00000551063 PXNP49023 591 aaPredicted RBP15.94■□□□□ 0.14
PRPF40B-211ENST00000551063 ENPP2Q13822 863 aa15.94■□□□□ 0.14
PRPF40B-211ENST00000551063 PUM1Q14671 1186 aaKnown RBP eCLIP15.94■□□□□ 0.14
PRPF40B-211ENST00000551063 ANO7Q6IWH7 933 aa15.94■□□□□ 0.14
PRPF40B-211ENST00000551063 DNAJC24Q6P3W2 148 aa15.94■□□□□ 0.14
PRPF40B-211ENST00000551063 CHST9Q7L1S5 443 aa15.94■□□□□ 0.14
PRPF40B-211ENST00000551063 ZNF571Q7Z3V5 609 aaPredicted RBP15.94■□□□□ 0.14
PRPF40B-211ENST00000551063 MCOLN2Q8IZK6 566 aa15.94■□□□□ 0.14
PRPF40B-211ENST00000551063 EMC1Q8N766 993 aa15.94■□□□□ 0.14
PRPF40B-211ENST00000551063 RNF214Q8ND24 703 aa15.94■□□□□ 0.14
PRPF40B-211ENST00000551063 MDGA1Q8NFP4 955 aa15.94■□□□□ 0.14
PRPF40B-211ENST00000551063 WFDC5Q8TCV5 224 aa15.94■□□□□ 0.14
PRPF40B-211ENST00000551063 GAB3Q8WWW8 586 aa15.94■□□□□ 0.14
PRPF40B-211ENST00000551063 RXFP2Q8WXD0 754 aa15.94■□□□□ 0.14
PRPF40B-211ENST00000551063 LMLNQ96KR4 655 aa15.94■□□□□ 0.14
PRPF40B-211ENST00000551063 CFAP57Q96MR6 1250 aa15.94■□□□□ 0.14
PRPF40B-211ENST00000551063 ACOX2Q99424 681 aa15.94■□□□□ 0.14
PRPF40B-211ENST00000551063 CIPCQ9C0C6 399 aa15.94■□□□□ 0.14
PRPF40B-211ENST00000551063 TKTL2Q9H0I9 626 aa15.94■□□□□ 0.14
PRPF40B-211ENST00000551063 STIM2Q9P246 746 aa15.94■□□□□ 0.14
PRPF40B-211ENST00000551063 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.94■□□□□ 0.14
PRPF40B-211ENST00000551063 HS3ST4Q9Y661 456 aa15.94■□□□□ 0.14
PRPF40B-211ENST00000551063 BZW2Q9Y6E2 419 aaKnown RBP15.94■□□□□ 0.14
PRPF40B-211ENST00000551063 OTOGLQ3ZCN5 2332 aa15.93■□□□□ 0.14
PRPF40B-211ENST00000551063 A0A1B0GVM2 712 aa15.93■□□□□ 0.14
PRPF40B-211ENST00000551063 TCRBV5S1A1TA0A578 114 aa15.93■□□□□ 0.14
PRPF40B-211ENST00000551063 TCAF2A6NFQ2 919 aa15.93■□□□□ 0.14
PRPF40B-211ENST00000551063 SIGLEC16A6NMB1 481 aa15.93■□□□□ 0.14
PRPF40B-211ENST00000551063 HRO43593 1189 aa15.93■□□□□ 0.14
PRPF40B-211ENST00000551063 RPP40O75818 363 aaKnown RBP15.93■□□□□ 0.14
PRPF40B-211ENST00000551063 GYPCP04921 128 aa15.93■□□□□ 0.14
PRPF40B-211ENST00000551063 GZMAP12544 262 aa15.93■□□□□ 0.14
PRPF40B-211ENST00000551063 PDGFRAP16234 1089 aa15.93■□□□□ 0.14
PRPF40B-211ENST00000551063 LMAN2Q12907 356 aa15.93■□□□□ 0.14
PRPF40B-211ENST00000551063 AUHQ13825 339 aaKnown RBP15.93■□□□□ 0.14
PRPF40B-211ENST00000551063 TRIM14Q14142 442 aa15.93■□□□□ 0.14
PRPF40B-211ENST00000551063 SIM2Q14190 667 aaPredicted RBP15.93■□□□□ 0.14
PRPF40B-211ENST00000551063 STARD3Q14849 445 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms