RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 ZNF135P52742 658 aaPredicted RBP12.51□□□□□ -0.41
NR4A1-215ENST00000550557 RRP1BQ14684 758 aaKnown RBP12.51□□□□□ -0.41
NR4A1-215ENST00000550557 UBXN2BQ14CS0 331 aa12.51□□□□□ -0.41
NR4A1-215ENST00000550557 SLC35G1Q2M3R5 365 aa12.51□□□□□ -0.41
NR4A1-215ENST00000550557 FAM153CQ494X1 144 aa12.51□□□□□ -0.41
NR4A1-215ENST00000550557 PKN3Q6P5Z2 889 aa12.51□□□□□ -0.41
NR4A1-215ENST00000550557 MCOLN2Q8IZK6 566 aa12.51□□□□□ -0.41
NR4A1-215ENST00000550557 NAT16Q8N8M0 369 aa12.51□□□□□ -0.41
NR4A1-215ENST00000550557 FRMD8P1Q9BZ68 369 aaPredicted RBP12.51□□□□□ -0.41
NR4A1-215ENST00000550557 EML4Q9HC35 981 aaKnown RBP12.51□□□□□ -0.41
NR4A1-215ENST00000550557 FAM153AQ9UHL3 310 aa12.51□□□□□ -0.41
NR4A1-215ENST00000550557 APOBEC2Q9Y235 224 aaKnown RBP12.51□□□□□ -0.41
NR4A1-215ENST00000550557 MYH7P12883 1935 aa12.51□□□□□ -0.41
NR4A1-215ENST00000550557 MYO9BQ13459 2157 aa12.51□□□□□ -0.41
NR4A1-215ENST00000550557 ZSCAN5CA6NGD5 496 aaPredicted RBP12.51□□□□□ -0.41
NR4A1-215ENST00000550557 ARL5CA6NH57 179 aa12.51□□□□□ -0.41
NR4A1-215ENST00000550557 SERPINB9P50453 376 aa12.51□□□□□ -0.41
NR4A1-215ENST00000550557 MORF4L2Q15014 288 aa12.51□□□□□ -0.41
NR4A1-215ENST00000550557 SETMARQ53H47 684 aaPredicted RBP12.51□□□□□ -0.41
NR4A1-215ENST00000550557 ARSHQ5FYA8 562 aa12.51□□□□□ -0.41
NR4A1-215ENST00000550557 GDF6Q6KF10 455 aaPredicted RBP12.51□□□□□ -0.41
NR4A1-215ENST00000550557 KCNT2Q6UVM3 1135 aa12.51□□□□□ -0.41
NR4A1-215ENST00000550557 VCPIP1Q96JH7 1222 aa12.51□□□□□ -0.41
NR4A1-215ENST00000550557 C9orf72Q96LT7 481 aa12.51□□□□□ -0.41
NR4A1-215ENST00000550557 EIF2AQ9BY44 585 aaKnown RBP12.51□□□□□ -0.41
NR4A1-215ENST00000550557 UTP6Q9NYH9 597 aaKnown RBP12.51□□□□□ -0.41
NR4A1-215ENST00000550557 WWOXQ9NZC7 414 aa12.51□□□□□ -0.41
NR4A1-215ENST00000550557 ARL2BPQ9Y2Y0 163 aa12.51□□□□□ -0.41
NR4A1-215ENST00000550557 BAZ2AQ9UIF9 1905 aaKnown RBP12.51□□□□□ -0.41
NR4A1-215ENST00000550557 TULP2O00295 520 aa12.5□□□□□ -0.41
NR4A1-215ENST00000550557 KIF1CO43896 1103 aaKnown RBP12.5□□□□□ -0.41
NR4A1-215ENST00000550557 MTA2O94776 668 aa12.5□□□□□ -0.41
NR4A1-215ENST00000550557 ESRRAP11474 423 aaPredicted RBP12.5□□□□□ -0.41
NR4A1-215ENST00000550557 OTUD4Q01804 1114 aaKnown RBP12.5□□□□□ -0.41
NR4A1-215ENST00000550557 MCL1Q07820 350 aa12.5□□□□□ -0.41
NR4A1-215ENST00000550557 TAF10Q12962 218 aa12.5□□□□□ -0.41
NR4A1-215ENST00000550557 TTMPQ5BVD1 217 aa12.5□□□□□ -0.41
NR4A1-215ENST00000550557 TRPM8Q7Z2W7 1104 aa12.5□□□□□ -0.41
NR4A1-215ENST00000550557 TTC7BQ86TV6 843 aa12.5□□□□□ -0.41
NR4A1-215ENST00000550557 MDM1Q8TC05 714 aa12.5□□□□□ -0.41
NR4A1-215ENST00000550557 TRIB2Q92519 343 aa12.5□□□□□ -0.41
NR4A1-215ENST00000550557 GRAMD1AQ96CP6 724 aa12.5□□□□□ -0.41
NR4A1-215ENST00000550557 TTYH3Q9C0H2 523 aa12.5□□□□□ -0.41
NR4A1-215ENST00000550557 ARHGAP39Q9C0H5 1083 aa12.5□□□□□ -0.41
NR4A1-215ENST00000550557 TASP1Q9H6P5 420 aa12.5□□□□□ -0.41
NR4A1-215ENST00000550557 ZFP14Q9HCL3 533 aa12.5□□□□□ -0.41
NR4A1-215ENST00000550557 CD248Q9HCU0 757 aa12.5□□□□□ -0.41
NR4A1-215ENST00000550557 UBP1Q9NZI7 540 aa12.5□□□□□ -0.41
NR4A1-215ENST00000550557 USP15Q9Y4E8 981 aaPredicted RBP12.5□□□□□ -0.41
NR4A1-215ENST00000550557 TTC36A6NLP5 189 aa12.5□□□□□ -0.41
NR4A1-215ENST00000550557 SPAG6O75602 509 aa12.5□□□□□ -0.41
NR4A1-215ENST00000550557 KCNA3P22001 575 aa12.5□□□□□ -0.41
NR4A1-215ENST00000550557 HDAC4P56524 1084 aa12.5□□□□□ -0.41
NR4A1-215ENST00000550557 CBWD6Q4V339 395 aa12.5□□□□□ -0.41
NR4A1-215ENST00000550557 CBWD3Q5JTY5 395 aa12.5□□□□□ -0.41
NR4A1-215ENST00000550557 CBWD5Q5RIA9 395 aa12.5□□□□□ -0.41
NR4A1-215ENST00000550557 SLC13A5Q86YT5 568 aaPredicted RBP12.5□□□□□ -0.41
NR4A1-215ENST00000550557 ETNK1Q9HBU6 452 aa12.5□□□□□ -0.41
NR4A1-215ENST00000550557 A0A0B4J269 797 aa12.5□□□□□ -0.41
NR4A1-215ENST00000550557 ZBTB17Q13105 803 aa12.5□□□□□ -0.41
NR4A1-215ENST00000550557 MAPK7Q13164 816 aa12.5□□□□□ -0.41
NR4A1-215ENST00000550557 STAT4Q14765 748 aa12.5□□□□□ -0.41
NR4A1-215ENST00000550557 LONRF1Q17RB8 773 aa12.5□□□□□ -0.41
NR4A1-215ENST00000550557 ZNF792Q3KQV3 632 aa12.5□□□□□ -0.41
NR4A1-215ENST00000550557 CYB5D1Q6P9G0 228 aa12.5□□□□□ -0.41
NR4A1-215ENST00000550557 PPIL6Q8IXY8 311 aa12.5□□□□□ -0.41
NR4A1-215ENST00000550557 RSPH1Q8WYR4 309 aa12.5□□□□□ -0.41
NR4A1-215ENST00000550557 KAT2BQ92831 832 aa12.5□□□□□ -0.41
NR4A1-215ENST00000550557 LRRC37BQ96QE4 947 aa12.5□□□□□ -0.41
NR4A1-215ENST00000550557 PDZD7Q9H5P4 517 aa12.5□□□□□ -0.41
NR4A1-215ENST00000550557 COPS7BQ9H9Q2 264 aaPredicted RBP12.5□□□□□ -0.41
NR4A1-215ENST00000550557 GGT7Q9UJ14 662 aa12.5□□□□□ -0.41
NR4A1-215ENST00000550557 CLDN5O00501 218 aa12.5□□□□□ -0.41
NR4A1-215ENST00000550557 RAP1GDS1P52306 607 aa12.5□□□□□ -0.41
NR4A1-215ENST00000550557 GJA9P57773 515 aa12.5□□□□□ -0.41
NR4A1-215ENST00000550557 DLG4P78352 724 aa12.5□□□□□ -0.41
NR4A1-215ENST00000550557 MAGEB10Q96LZ2 347 aaPredicted RBP12.5□□□□□ -0.41
NR4A1-215ENST00000550557 TRIM55Q9BYV6 548 aa12.5□□□□□ -0.41
NR4A1-215ENST00000550557 OR12D3Q9UGF7 316 aa12.5□□□□□ -0.41
NR4A1-215ENST00000550557 ZNF536O15090 1300 aa12.5□□□□□ -0.41
NR4A1-215ENST00000550557 NEDD8-MDP1E9PL57 170 aa12.49□□□□□ -0.41
NR4A1-215ENST00000550557 RPL17P18621 184 aaKnown RBP12.49□□□□□ -0.41
NR4A1-215ENST00000550557 CLCNKBP51801 687 aa12.49□□□□□ -0.41
NR4A1-215ENST00000550557 PURAQ00577 322 aaKnown RBP12.49□□□□□ -0.41
NR4A1-215ENST00000550557 PPP4R4Q6NUP7 873 aa12.49□□□□□ -0.41
NR4A1-215ENST00000550557 USP45Q70EL2 814 aa12.49□□□□□ -0.41
NR4A1-215ENST00000550557 TRDMT1O14717 391 aaKnown RBP12.49□□□□□ -0.41
NR4A1-215ENST00000550557 AMPD1P23109 780 aa12.49□□□□□ -0.41
NR4A1-215ENST00000550557 HTR1BP28222 390 aa12.49□□□□□ -0.41
NR4A1-215ENST00000550557 C21orf59P57076 290 aa12.49□□□□□ -0.41
NR4A1-215ENST00000550557 GRAMD4Q6IC98 578 aa12.49□□□□□ -0.41
NR4A1-215ENST00000550557 FAM124AQ86V42 546 aa12.49□□□□□ -0.41
NR4A1-215ENST00000550557 ECHDC2Q86YB7 292 aa12.49□□□□□ -0.41
NR4A1-215ENST00000550557 FAM129AQ9BZQ8 928 aa12.49□□□□□ -0.41
NR4A1-215ENST00000550557 FOXP3Q9BZS1 431 aa12.49□□□□□ -0.41
NR4A1-215ENST00000550557 PABPC3Q9H361 631 aaKnown RBP12.49□□□□□ -0.41
NR4A1-215ENST00000550557 DRG1Q9Y295 367 aaKnown RBP12.49□□□□□ -0.41
NR4A1-215ENST00000550557 L3MBTL1Q9Y468 752 aa12.49□□□□□ -0.41
NR4A1-215ENST00000550557 ORC6Q9Y5N6 252 aa12.49□□□□□ -0.41
NR4A1-215ENST00000550557 DYRK3O43781 588 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms