RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 VCLP18206 1134 aa16.15■□□□□ 0.18
RBFOX1-212ENST00000550418 LRPAP1P30533 357 aa16.15■□□□□ 0.18
RBFOX1-212ENST00000550418 ST13P50502 369 aaKnown RBP16.15■□□□□ 0.18
RBFOX1-212ENST00000550418 RAD51Q06609 339 aa16.15■□□□□ 0.18
RBFOX1-212ENST00000550418 TP53BP2Q13625 1128 aa16.15■□□□□ 0.18
RBFOX1-212ENST00000550418 STRIP1Q5VSL9 837 aa16.15■□□□□ 0.18
RBFOX1-212ENST00000550418 LRRC38Q5VT99 294 aa16.15■□□□□ 0.18
RBFOX1-212ENST00000550418 SFRP1Q8N474 314 aa16.15■□□□□ 0.18
RBFOX1-212ENST00000550418 RBM15BQ8NDT2 890 aaKnown RBP16.15■□□□□ 0.18
RBFOX1-212ENST00000550418 SEMA4DQ92854 862 aa16.15■□□□□ 0.18
RBFOX1-212ENST00000550418 SMARCAD1Q9H4L7 1026 aa16.15■□□□□ 0.18
RBFOX1-212ENST00000550418 CLK4Q9HAZ1 481 aaKnown RBP16.15■□□□□ 0.18
RBFOX1-212ENST00000550418 PIH1D1Q9NWS0 290 aaKnown RBP16.15■□□□□ 0.18
RBFOX1-212ENST00000550418 CACNA2D2Q9NY47 1150 aa16.15■□□□□ 0.18
RBFOX1-212ENST00000550418 FAM20BO75063 409 aa16.15■□□□□ 0.18
RBFOX1-212ENST00000550418 ZNF682O95780 498 aa16.15■□□□□ 0.18
RBFOX1-212ENST00000550418 FRG1Q14331 258 aaKnown RBP16.15■□□□□ 0.18
RBFOX1-212ENST00000550418 PPP1R15BQ5SWA1 713 aa16.15■□□□□ 0.18
RBFOX1-212ENST00000550418 SLC30A10Q6XR72 485 aa16.15■□□□□ 0.18
RBFOX1-212ENST00000550418 KCNMB4Q86W47 210 aa16.15■□□□□ 0.18
RBFOX1-212ENST00000550418 WDR49Q8IV35 697 aa16.15■□□□□ 0.18
RBFOX1-212ENST00000550418 EID3Q8N140 333 aa16.15■□□□□ 0.18
RBFOX1-212ENST00000550418 MAGEE2Q8TD90 523 aaPredicted RBP16.15■□□□□ 0.18
RBFOX1-212ENST00000550418 HTR3CQ8WXA8 447 aa16.15■□□□□ 0.18
RBFOX1-212ENST00000550418 SPATA17Q96L03 361 aa16.15■□□□□ 0.18
RBFOX1-212ENST00000550418 TTYH3Q9C0H2 523 aa16.15■□□□□ 0.18
RBFOX1-212ENST00000550418 CAPN8A6NHC0 703 aa16.15■□□□□ 0.18
RBFOX1-212ENST00000550418 FAM86B1E9PN63 330 aa16.15■□□□□ 0.18
RBFOX1-212ENST00000550418 PSMD12O00232 456 aaPredicted RBP16.15■□□□□ 0.18
RBFOX1-212ENST00000550418 TPP1O14773 563 aa16.15■□□□□ 0.18
RBFOX1-212ENST00000550418 CHADO15335 359 aa16.15■□□□□ 0.18
RBFOX1-212ENST00000550418 TXNP10599 105 aaKnown RBP16.15■□□□□ 0.18
RBFOX1-212ENST00000550418 RBL1P28749 1068 aa16.15■□□□□ 0.18
RBFOX1-212ENST00000550418 MIPP30301 263 aa16.15■□□□□ 0.18
RBFOX1-212ENST00000550418 MTMR2Q13614 643 aa16.15■□□□□ 0.18
RBFOX1-212ENST00000550418 SPANXN3Q5MJ09 141 aa16.15■□□□□ 0.18
RBFOX1-212ENST00000550418 GPR107Q5VW38 600 aa16.15■□□□□ 0.18
RBFOX1-212ENST00000550418 ABRAXAS1Q6UWZ7 409 aa16.15■□□□□ 0.18
RBFOX1-212ENST00000550418 ACOT1Q86TX2 421 aa16.15■□□□□ 0.18
RBFOX1-212ENST00000550418 OR7A2PQ8NGA2 310 aa16.15■□□□□ 0.18
RBFOX1-212ENST00000550418 APOL5Q9BWW9 433 aa16.15■□□□□ 0.18
RBFOX1-212ENST00000550418 SLC17A7Q9P2U7 560 aa16.15■□□□□ 0.18
RBFOX1-212ENST00000550418 VPS9D1Q9Y2B5 631 aa16.15■□□□□ 0.18
RBFOX1-212ENST00000550418 MAGEC1O60732 1142 aa16.15■□□□□ 0.18
RBFOX1-212ENST00000550418 BANF1O75531 89 aa16.15■□□□□ 0.18
RBFOX1-212ENST00000550418 DDX5P17844 614 aaKnown RBP16.15■□□□□ 0.18
RBFOX1-212ENST00000550418 HDDC2Q7Z4H3 204 aa16.15■□□□□ 0.18
RBFOX1-212ENST00000550418 MBOAT7Q96N66 472 aa16.15■□□□□ 0.18
RBFOX1-212ENST00000550418 TRMT6Q9UJA5 497 aaKnown RBP16.15■□□□□ 0.18
RBFOX1-212ENST00000550418 LRFN2Q9ULH4 789 aa16.15■□□□□ 0.18
RBFOX1-212ENST00000550418 PRPF19Q9UMS4 504 aaKnown RBP16.15■□□□□ 0.18
RBFOX1-212ENST00000550418 PLA2G4CQ9UP65 541 aa16.15■□□□□ 0.18
RBFOX1-212ENST00000550418 PIN4Q9Y237 131 aaKnown RBP16.15■□□□□ 0.18
RBFOX1-212ENST00000550418 RAD54BQ9Y620 910 aa16.15■□□□□ 0.18
RBFOX1-212ENST00000550418 VWA5AO00534 786 aa16.14■□□□□ 0.17
RBFOX1-212ENST00000550418 VIL1P09327 827 aaKnown RBP16.14■□□□□ 0.17
RBFOX1-212ENST00000550418 CCNA2P20248 432 aa16.14■□□□□ 0.17
RBFOX1-212ENST00000550418 KDELR1P24390 212 aa16.14■□□□□ 0.17
RBFOX1-212ENST00000550418 GRIA3P42263 894 aa16.14■□□□□ 0.17
RBFOX1-212ENST00000550418 CD151P48509 253 aa16.14■□□□□ 0.17
RBFOX1-212ENST00000550418 NAGLUP54802 743 aa16.14■□□□□ 0.17
RBFOX1-212ENST00000550418 HMGCS2P54868 508 aa16.14■□□□□ 0.17
RBFOX1-212ENST00000550418 PSME3P61289 254 aa16.14■□□□□ 0.17
RBFOX1-212ENST00000550418 USP46P62068 366 aa16.14■□□□□ 0.17
RBFOX1-212ENST00000550418 CES3Q6UWW8 571 aa16.14■□□□□ 0.17
RBFOX1-212ENST00000550418 OTOP1Q7RTM1 612 aa16.14■□□□□ 0.17
RBFOX1-212ENST00000550418 SYTL1Q8IYJ3 562 aa16.14■□□□□ 0.17
RBFOX1-212ENST00000550418 SPOCK2Q92563 424 aa16.14■□□□□ 0.17
RBFOX1-212ENST00000550418 TMEM176AQ96HP8 235 aa16.14■□□□□ 0.17
RBFOX1-212ENST00000550418 MTG1Q9BT17 334 aaPredicted RBP16.14■□□□□ 0.17
RBFOX1-212ENST00000550418 FHDC1Q9C0D6 1143 aaPredicted RBP16.14■□□□□ 0.17
RBFOX1-212ENST00000550418 ASTN1O14525 1302 aa16.14■□□□□ 0.17
RBFOX1-212ENST00000550418 TRIM38O00635 465 aa16.14■□□□□ 0.17
RBFOX1-212ENST00000550418 BIRC5O15392 142 aa16.14■□□□□ 0.17
RBFOX1-212ENST00000550418 DDX3YO15523 660 aaKnown RBP16.14■□□□□ 0.17
RBFOX1-212ENST00000550418 TOMM70O94826 608 aa16.14■□□□□ 0.17
RBFOX1-212ENST00000550418 SLC1A5Q15758 541 aa16.14■□□□□ 0.17
RBFOX1-212ENST00000550418 BROXQ5VW32 411 aa16.14■□□□□ 0.17
RBFOX1-212ENST00000550418 RP9Q8TA86 221 aaKnown RBP16.14■□□□□ 0.17
RBFOX1-212ENST00000550418 RBM46Q8TBY0 533 aaKnown RBP16.14■□□□□ 0.17
RBFOX1-212ENST00000550418 ABHD8Q96I13 439 aa16.14■□□□□ 0.17
RBFOX1-212ENST00000550418 FBXO28Q9NVF7 368 aa16.14■□□□□ 0.17
RBFOX1-212ENST00000550418 H2AFY2Q9P0M6 372 aaPredicted RBP16.14■□□□□ 0.17
RBFOX1-212ENST00000550418 HS6ST1O60243 411 aa16.14■□□□□ 0.17
RBFOX1-212ENST00000550418 ITGAVP06756 1048 aa16.14■□□□□ 0.17
RBFOX1-212ENST00000550418 DLG4P78352 724 aa16.14■□□□□ 0.17
RBFOX1-212ENST00000550418 MAMLD1Q13495 774 aa16.14■□□□□ 0.17
RBFOX1-212ENST00000550418 POLD3Q15054 466 aaPredicted RBP16.14■□□□□ 0.17
RBFOX1-212ENST00000550418 ATP13A4Q4VNC1 1196 aa16.14■□□□□ 0.17
RBFOX1-212ENST00000550418 PRAMEF18Q5VWM3 479 aa16.14■□□□□ 0.17
RBFOX1-212ENST00000550418 C8orf59Q8N0T1 100 aaPredicted RBP16.14■□□□□ 0.17
RBFOX1-212ENST00000550418 VGLL2Q8N8G2 317 aa16.14■□□□□ 0.17
RBFOX1-212ENST00000550418 C19orf18Q8NEA5 215 aa16.14■□□□□ 0.17
RBFOX1-212ENST00000550418 FAM120BQ96EK7 910 aaKnown RBP16.14■□□□□ 0.17
RBFOX1-212ENST00000550418 MMTAG2Q9BU76 263 aaKnown RBP16.14■□□□□ 0.17
RBFOX1-212ENST00000550418 RERGLQ9H628 205 aa16.14■□□□□ 0.17
RBFOX1-212ENST00000550418 EBF2Q9HAK2 575 aa16.14■□□□□ 0.17
RBFOX1-212ENST00000550418 XPNPEP3Q9NQH7 507 aa16.14■□□□□ 0.17
RBFOX1-212ENST00000550418 ANKRD6Q9Y2G4 727 aa16.14■□□□□ 0.17
RBFOX1-212ENST00000550418 SESN1Q9Y6P5 492 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms