RNA–Protein interactions for RNA: ENST00000549995.1

PFDN5-208, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-208ENST00000549995 CNOT8Q9UFF9 292 aaKnown RBP12.33□□□□□ -0.44
PFDN5-208ENST00000549995 SLC12A6Q9UHW9 1150 aa12.33□□□□□ -0.44
PFDN5-208ENST00000549995 HCN2Q9UL51 889 aa12.33□□□□□ -0.44
PFDN5-208ENST00000549995 NEU3Q9UQ49 428 aa12.33□□□□□ -0.44
PFDN5-208ENST00000549995 HS3ST4Q9Y661 456 aa12.33□□□□□ -0.44
PFDN5-208ENST00000549995 DMDP11532 3685 aa12.32□□□□□ -0.44
PFDN5-208ENST00000549995 GOLGA6L7A0A1B0GV03 622 aa12.32□□□□□ -0.44
PFDN5-208ENST00000549995 DRGXA6NNA5 263 aa12.32□□□□□ -0.44
PFDN5-208ENST00000549995 HOXA6P31267 233 aa12.32□□□□□ -0.44
PFDN5-208ENST00000549995 DGKGP49619 791 aa12.32□□□□□ -0.44
PFDN5-208ENST00000549995 ATXN1P54253 815 aaKnown RBP12.32□□□□□ -0.44
PFDN5-208ENST00000549995 MRPS21P82921 87 aaKnown RBP12.32□□□□□ -0.44
PFDN5-208ENST00000549995 NME3Q13232 169 aa12.32□□□□□ -0.44
PFDN5-208ENST00000549995 ENPP2Q13822 863 aa12.32□□□□□ -0.44
PFDN5-208ENST00000549995 ACAP1Q15027 740 aa12.32□□□□□ -0.44
PFDN5-208ENST00000549995 EIF4HQ15056 248 aaKnown RBP12.32□□□□□ -0.44
PFDN5-208ENST00000549995 TSR1Q2NL82 804 aaKnown RBP12.32□□□□□ -0.44
PFDN5-208ENST00000549995 C15orf59Q2T9L4 293 aaPredicted RBP12.32□□□□□ -0.44
PFDN5-208ENST00000549995 ZNF528Q3MIS6 628 aa12.32□□□□□ -0.44
PFDN5-208ENST00000549995 RAP1GAP2Q684P5 730 aa12.32□□□□□ -0.44
PFDN5-208ENST00000549995 RFWD3Q6PCD5 774 aa12.32□□□□□ -0.44
PFDN5-208ENST00000549995 Q6ZS52 159 aa12.32□□□□□ -0.44
PFDN5-208ENST00000549995 SND1Q7KZF4 910 aaKnown RBP eCLIP12.32□□□□□ -0.44
PFDN5-208ENST00000549995 CHST9Q7L1S5 443 aa12.32□□□□□ -0.44
PFDN5-208ENST00000549995 ANKS1BQ7Z6G8 1248 aa12.32□□□□□ -0.44
PFDN5-208ENST00000549995 CHSY1Q86X52 802 aa12.32□□□□□ -0.44
PFDN5-208ENST00000549995 NIPA2Q8N8Q9 360 aa12.32□□□□□ -0.44
PFDN5-208ENST00000549995 PRSS33Q8NF86 280 aa12.32□□□□□ -0.44
PFDN5-208ENST00000549995 FIBINQ8TAL6 211 aa12.32□□□□□ -0.44
PFDN5-208ENST00000549995 WFIKKN2Q8TEU8 576 aa12.32□□□□□ -0.44
PFDN5-208ENST00000549995 USP33Q8TEY7 942 aa12.32□□□□□ -0.44
PFDN5-208ENST00000549995 FAM172AQ8WUF8 416 aa12.32□□□□□ -0.44
PFDN5-208ENST00000549995 TMA16Q96EY4 203 aaKnown RBP12.32□□□□□ -0.44
PFDN5-208ENST00000549995 NCAPGQ9BPX3 1015 aa12.32□□□□□ -0.44
PFDN5-208ENST00000549995 TKTL2Q9H0I9 626 aa12.32□□□□□ -0.44
PFDN5-208ENST00000549995 OSBPL2Q9H1P3 480 aa12.32□□□□□ -0.44
PFDN5-208ENST00000549995 MRPL47Q9HD33 250 aaKnown RBP12.32□□□□□ -0.44
PFDN5-208ENST00000549995 RBM12Q9NTZ6 932 aaKnown RBP12.32□□□□□ -0.44
PFDN5-208ENST00000549995 ZNF212Q9UDV6 495 aa12.32□□□□□ -0.44
PFDN5-208ENST00000549995 FBXO4Q9UKT5 387 aa12.32□□□□□ -0.44
PFDN5-208ENST00000549995 INTUQ9ULD6 942 aa12.32□□□□□ -0.44
PFDN5-208ENST00000549995 CLEC4EQ9ULY5 219 aa12.32□□□□□ -0.44
PFDN5-208ENST00000549995 A0A1B0GVM2 712 aa12.31□□□□□ -0.44
PFDN5-208ENST00000549995 TCAF2A6NFQ2 919 aa12.31□□□□□ -0.44
PFDN5-208ENST00000549995 TMCO5BA8MYB1 307 aa12.31□□□□□ -0.44
PFDN5-208ENST00000549995 F5H5T6 163 aa12.31□□□□□ -0.44
PFDN5-208ENST00000549995 NPC1O15118 1278 aa12.31□□□□□ -0.44
PFDN5-208ENST00000549995 TRIM24O15164 1050 aa12.31□□□□□ -0.44
PFDN5-208ENST00000549995 ATMINO43313 823 aaPredicted RBP12.31□□□□□ -0.44
PFDN5-208ENST00000549995 RNF40O75150 1001 aa12.31□□□□□ -0.44
PFDN5-208ENST00000549995 MTA2O94776 668 aa12.31□□□□□ -0.44
PFDN5-208ENST00000549995 LUC7L3O95232 432 aaKnown RBP12.31□□□□□ -0.44
PFDN5-208ENST00000549995 MOCS2O96007 188 aaPredicted RBP12.31□□□□□ -0.44
PFDN5-208ENST00000549995 TMEM253P0C7T8 217 aa12.31□□□□□ -0.44
PFDN5-208ENST00000549995 HNRNPLP14866 589 aaKnown RBP eCLIP12.31□□□□□ -0.44
PFDN5-208ENST00000549995 HLA-FP30511 346 aa12.31□□□□□ -0.44
PFDN5-208ENST00000549995 HOXC13P31276 330 aa12.31□□□□□ -0.44
PFDN5-208ENST00000549995 ADRA1BP35368 520 aa12.31□□□□□ -0.44
PFDN5-208ENST00000549995 CCR3P51677 355 aa12.31□□□□□ -0.44
PFDN5-208ENST00000549995 GALCP54803 685 aa12.31□□□□□ -0.44
PFDN5-208ENST00000549995 GFPT1Q06210 699 aaPredicted RBP12.31□□□□□ -0.44
PFDN5-208ENST00000549995 TCF15Q12870 199 aa12.31□□□□□ -0.44
PFDN5-208ENST00000549995 MTAPQ13126 283 aa12.31□□□□□ -0.44
PFDN5-208ENST00000549995 SEMA3BQ13214 749 aa12.31□□□□□ -0.44
PFDN5-208ENST00000549995 AUHQ13825 339 aaKnown RBP12.31□□□□□ -0.44
PFDN5-208ENST00000549995 RAB6CQ53S08 254 aa12.31□□□□□ -0.44
PFDN5-208ENST00000549995 CCDC122Q5T0U0 273 aa12.31□□□□□ -0.44
PFDN5-208ENST00000549995 C10orf76Q5T2E6 689 aa12.31□□□□□ -0.44
PFDN5-208ENST00000549995 SH3PXD2AQ5TCZ1 1133 aa12.31□□□□□ -0.44
PFDN5-208ENST00000549995 FBXL22Q6P050 247 aa12.31□□□□□ -0.44
PFDN5-208ENST00000549995 PHLDB2Q86SQ0 1253 aa12.31□□□□□ -0.44
PFDN5-208ENST00000549995 DNAAF5Q86Y56 855 aa12.31□□□□□ -0.44
PFDN5-208ENST00000549995 TMEM139Q8IV31 216 aa12.31□□□□□ -0.44
PFDN5-208ENST00000549995 C1orf210Q8IVY1 113 aa12.31□□□□□ -0.44
PFDN5-208ENST00000549995 CCDC170Q8IYT3 715 aa12.31□□□□□ -0.44
PFDN5-208ENST00000549995 ARFGAP1Q8N6T3 406 aa12.31□□□□□ -0.44
PFDN5-208ENST00000549995 WFDC5Q8TCV5 224 aa12.31□□□□□ -0.44
PFDN5-208ENST00000549995 DDI1Q8WTU0 396 aa12.31□□□□□ -0.44
PFDN5-208ENST00000549995 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.31□□□□□ -0.44
PFDN5-208ENST00000549995 RAB6CQ9H0N0 254 aa12.31□□□□□ -0.44
PFDN5-208ENST00000549995 THAP2Q9H0W7 228 aa12.31□□□□□ -0.44
PFDN5-208ENST00000549995 CD248Q9HCU0 757 aa12.31□□□□□ -0.44
PFDN5-208ENST00000549995 UVRAGQ9P2Y5 699 aa12.31□□□□□ -0.44
PFDN5-208ENST00000549995 PPARGC1AQ9UBK2 798 aaKnown RBP12.31□□□□□ -0.44
PFDN5-208ENST00000549995 LCMT1Q9UIC8 334 aa12.31□□□□□ -0.44
PFDN5-208ENST00000549995 MYO18AQ92614 2054 aaKnown RBP12.31□□□□□ -0.44
PFDN5-208ENST00000549995 WDFY4Q6ZS81 3184 aa12.3□□□□□ -0.44
PFDN5-208ENST00000549995 FAM170AA1A519 330 aa12.3□□□□□ -0.44
PFDN5-208ENST00000549995 TYW5A2RUC4 315 aaKnown RBP12.3□□□□□ -0.44
PFDN5-208ENST00000549995 EIF3CLB5ME19 914 aaKnown RBP12.3□□□□□ -0.44
PFDN5-208ENST00000549995 PRRT4C9JH25 899 aa12.3□□□□□ -0.44
PFDN5-208ENST00000549995 K7ESF4 209 aa12.3□□□□□ -0.44
PFDN5-208ENST00000549995 STK25O00506 426 aa12.3□□□□□ -0.44
PFDN5-208ENST00000549995 TBL1XO60907 577 aa12.3□□□□□ -0.44
PFDN5-208ENST00000549995 ATG13O75143 517 aa12.3□□□□□ -0.44
PFDN5-208ENST00000549995 HOXD11P31277 338 aaPredicted RBP12.3□□□□□ -0.44
PFDN5-208ENST00000549995 PCK1P35558 622 aa12.3□□□□□ -0.44
PFDN5-208ENST00000549995 VASPP50552 380 aaPredicted RBP12.3□□□□□ -0.44
PFDN5-208ENST00000549995 PLK1P53350 603 aa12.3□□□□□ -0.44
PFDN5-208ENST00000549995 RPS24P62847 133 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms