RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 SLC22A2O15244 555 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 HTRA2O43464 458 aaPredicted RBP5.08□□□□□ -1.6
SCAF11-212ENST00000549162 ZMPSTE24O75844 475 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 RASGRP1O95267 797 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 PRPH2P23942 346 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 TNFRSF4P43489 277 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 TUFMP49411 452 aaKnown RBP5.08□□□□□ -1.6
SCAF11-212ENST00000549162 GUCY1B3Q02153 619 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 SMC1AQ14683 1233 aaKnown RBP5.08□□□□□ -1.6
SCAF11-212ENST00000549162 ZNF528Q3MIS6 628 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 RTP2Q5QGT7 225 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 AFTPHQ6ULP2 937 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 TRMT10CQ7L0Y3 403 aaKnown RBP5.08□□□□□ -1.6
SCAF11-212ENST00000549162 BMP8AQ7Z5Y6 402 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 RHOT1Q8IXI2 618 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 CHPFQ8IZ52 775 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 ZNF511Q8NB15 262 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 GRK7Q8WTQ7 553 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 UBTD2Q8WUN7 234 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 HPDLQ96IR7 371 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 SMOQ99835 787 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 SARGQ9BW04 601 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 BLZF1Q9H2G9 400 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 CAAP1Q9H8G2 361 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 USP29Q9HBJ7 922 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 MCM8Q9UJA3 840 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 METRNQ9UJH8 293 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 A0A087X0T9 212 aa5.07□□□□□ -1.6
SCAF11-212ENST00000549162 MROH6A6NGR9 719 aa5.07□□□□□ -1.6
SCAF11-212ENST00000549162 TIMM44O43615 452 aa5.07□□□□□ -1.6
SCAF11-212ENST00000549162 FAM228BP0C875 321 aa5.07□□□□□ -1.6
SCAF11-212ENST00000549162 PYGMP11217 842 aa5.07□□□□□ -1.6
SCAF11-212ENST00000549162 ERGP11308 486 aa5.07□□□□□ -1.6
SCAF11-212ENST00000549162 PTPN1P18031 435 aaKnown RBP5.07□□□□□ -1.6
SCAF11-212ENST00000549162 SLC9A1P19634 815 aa5.07□□□□□ -1.6
SCAF11-212ENST00000549162 NEK2P51955 445 aa5.07□□□□□ -1.6
SCAF11-212ENST00000549162 GRM2Q14416 872 aa5.07□□□□□ -1.6
SCAF11-212ENST00000549162 MORF4L2Q15014 288 aa5.07□□□□□ -1.6
SCAF11-212ENST00000549162 SGO2Q562F6 1265 aa5.07□□□□□ -1.6
SCAF11-212ENST00000549162 FAM102BQ5T8I3 360 aa5.07□□□□□ -1.6
SCAF11-212ENST00000549162 CCDC149Q6ZUS6 474 aa5.07□□□□□ -1.6
SCAF11-212ENST00000549162 FAM35AQ86V20 835 aa5.07□□□□□ -1.6
SCAF11-212ENST00000549162 ACMSDQ8TDX5 336 aa5.07□□□□□ -1.6
SCAF11-212ENST00000549162 PIGOQ8TEQ8 1089 aa5.07□□□□□ -1.6
SCAF11-212ENST00000549162 COPS5Q92905 334 aa5.07□□□□□ -1.6
SCAF11-212ENST00000549162 LINC00615Q96LM1 132 aaPredicted RBP5.07□□□□□ -1.6
SCAF11-212ENST00000549162 NECTIN4Q96NY8 510 aa5.07□□□□□ -1.6
SCAF11-212ENST00000549162 VPS35Q96QK1 796 aa5.07□□□□□ -1.6
SCAF11-212ENST00000549162 NAPGQ99747 312 aaPredicted RBP5.07□□□□□ -1.6
SCAF11-212ENST00000549162 MGME1Q9BQP7 344 aa5.07□□□□□ -1.6
SCAF11-212ENST00000549162 TARS2Q9BW92 718 aaKnown RBP5.07□□□□□ -1.6
SCAF11-212ENST00000549162 EIF2AQ9BY44 585 aaKnown RBP5.07□□□□□ -1.6
SCAF11-212ENST00000549162 DMAP1Q9NPF5 467 aaPredicted RBP5.07□□□□□ -1.6
SCAF11-212ENST00000549162 NUP205Q92621 2012 aa5.07□□□□□ -1.6
SCAF11-212ENST00000549162 MAGEB16A2A368 324 aa5.07□□□□□ -1.6
SCAF11-212ENST00000549162 B2RBV5 119 aa5.07□□□□□ -1.6
SCAF11-212ENST00000549162 SOCS5O75159 536 aa5.07□□□□□ -1.6
SCAF11-212ENST00000549162 GJB6O95452 261 aa5.07□□□□□ -1.6
SCAF11-212ENST00000549162 CST3P01034 146 aaPredicted RBP5.07□□□□□ -1.6
SCAF11-212ENST00000549162 CAPNS1P04632 268 aa5.07□□□□□ -1.6
SCAF11-212ENST00000549162 RHOQP17081 205 aa5.07□□□□□ -1.6
SCAF11-212ENST00000549162 KCNA5P22460 613 aa5.07□□□□□ -1.6
SCAF11-212ENST00000549162 TYK2P29597 1187 aa5.07□□□□□ -1.6
SCAF11-212ENST00000549162 RDXP35241 583 aaKnown RBP5.07□□□□□ -1.6
SCAF11-212ENST00000549162 FDFT1P37268 417 aa5.07□□□□□ -1.6
SCAF11-212ENST00000549162 MAGEA8P43361 318 aa5.07□□□□□ -1.6
SCAF11-212ENST00000549162 STT3AP46977 705 aa5.07□□□□□ -1.6
SCAF11-212ENST00000549162 EIF3BP55884 814 aaKnown RBP5.07□□□□□ -1.6
SCAF11-212ENST00000549162 CDKL1Q00532 357 aa5.07□□□□□ -1.6
SCAF11-212ENST00000549162 PWP1Q13610 501 aa5.07□□□□□ -1.6
SCAF11-212ENST00000549162 CCDC14Q49A88 953 aa5.07□□□□□ -1.6
SCAF11-212ENST00000549162 TIGD5Q53EQ6 642 aa5.07□□□□□ -1.6
SCAF11-212ENST00000549162 ZNF667Q5HYK9 610 aa5.07□□□□□ -1.6
SCAF11-212ENST00000549162 WDR44Q5JSH3 913 aa5.07□□□□□ -1.6
SCAF11-212ENST00000549162 NAT8LQ8N9F0 302 aa5.07□□□□□ -1.6
SCAF11-212ENST00000549162 GOLM1Q8NBJ4 401 aa5.07□□□□□ -1.6
SCAF11-212ENST00000549162 C7orf57Q8NEG2 295 aa5.07□□□□□ -1.6
SCAF11-212ENST00000549162 PPM1EQ8WY54 764 aa5.07□□□□□ -1.6
SCAF11-212ENST00000549162 NINJ1Q92982 152 aa5.07□□□□□ -1.6
SCAF11-212ENST00000549162 FCRL5Q96RD9 977 aa5.07□□□□□ -1.6
SCAF11-212ENST00000549162 ARFGAP3Q9NP61 516 aa5.07□□□□□ -1.6
SCAF11-212ENST00000549162 VPS45Q9NRW7 570 aa5.07□□□□□ -1.6
SCAF11-212ENST00000549162 FAM114A2Q9NRY5 505 aa5.07□□□□□ -1.6
SCAF11-212ENST00000549162 GRHL1Q9NZI5 618 aa5.07□□□□□ -1.6
SCAF11-212ENST00000549162 SCML1Q9UN30 329 aa5.07□□□□□ -1.6
SCAF11-212ENST00000549162 ASLP04424 464 aa5.07□□□□□ -1.6
SCAF11-212ENST00000549162 DHRS4L1P0CG22 281 aa5.07□□□□□ -1.6
SCAF11-212ENST00000549162 ITIH2P19823 946 aa5.07□□□□□ -1.6
SCAF11-212ENST00000549162 ABCB4P21439 1286 aa5.07□□□□□ -1.6
SCAF11-212ENST00000549162 YY1P25490 414 aa5.07□□□□□ -1.6
SCAF11-212ENST00000549162 BMPR1AP36894 532 aa5.07□□□□□ -1.6
SCAF11-212ENST00000549162 DPP6P42658 865 aa5.07□□□□□ -1.6
SCAF11-212ENST00000549162 INSCQ1MX18 579 aa5.07□□□□□ -1.6
SCAF11-212ENST00000549162 TYSND1Q2T9J0 566 aa5.07□□□□□ -1.6
SCAF11-212ENST00000549162 PREPLQ4J6C6 727 aaPredicted RBP5.07□□□□□ -1.6
SCAF11-212ENST00000549162 LIN9Q5TKA1 542 aa5.07□□□□□ -1.6
SCAF11-212ENST00000549162 AFAP1L2Q8N4X5 818 aa5.07□□□□□ -1.6
SCAF11-212ENST00000549162 RASSF8Q8NHQ8 419 aa5.07□□□□□ -1.6
SCAF11-212ENST00000549162 ZDHHC1Q8WTX9 485 aa5.07□□□□□ -1.6
SCAF11-212ENST00000549162 TFAP2BQ92481 460 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms