RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 OR10A2Q9H208 303 aa4.13□□□□□ -1.75
APAF1-208ENST00000549007 TTYH1Q9H313 450 aaPredicted RBP4.13□□□□□ -1.75
APAF1-208ENST00000549007 RAVER2Q9HCJ3 691 aaKnown RBP4.13□□□□□ -1.75
APAF1-208ENST00000549007 IL23AQ9NPF7 189 aa4.13□□□□□ -1.75
APAF1-208ENST00000549007 AASSQ9UDR5 926 aa4.13□□□□□ -1.75
APAF1-208ENST00000549007 MAD2L2Q9UI95 211 aa4.13□□□□□ -1.75
APAF1-208ENST00000549007 FBXO10Q9UK96 956 aa4.13□□□□□ -1.75
APAF1-208ENST00000549007 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.13□□□□□ -1.75
APAF1-208ENST00000549007 DDX49Q9Y6V7 483 aaKnown RBP4.13□□□□□ -1.75
APAF1-208ENST00000549007 KLRF2D3W0D1 207 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 J3KTA2 159 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 DCLK1O15075 740 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 WDR46O15213 610 aaKnown RBP4.12□□□□□ -1.75
APAF1-208ENST00000549007 CYTH3O43739 400 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 RRP9O43818 475 aaKnown RBP4.12□□□□□ -1.75
APAF1-208ENST00000549007 SLC43A1O75387 559 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 MAFO75444 373 aaPredicted RBP4.12□□□□□ -1.75
APAF1-208ENST00000549007 HGFP14210 728 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 TPH1P17752 444 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 PFKLP17858 780 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 ACVR2AP27037 513 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 NOVP48745 357 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 METAP2P50579 478 aaKnown RBP eCLIP4.12□□□□□ -1.75
APAF1-208ENST00000549007 SREBF2Q12772 1141 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 RABEP1Q15276 862 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 TARBP2Q15633 366 aaKnown RBP4.12□□□□□ -1.75
APAF1-208ENST00000549007 MAPKAPK3Q16644 382 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 USH1GQ495M9 461 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 FBXO47Q5MNV8 452 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.12□□□□□ -1.75
APAF1-208ENST00000549007 SYT13Q7L8C5 426 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 FASTKD5Q7L8L6 764 aaKnown RBP4.12□□□□□ -1.75
APAF1-208ENST00000549007 CCDC83Q8IWF9 413 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 SRBD1Q8N5C6 995 aaKnown RBP4.12□□□□□ -1.75
APAF1-208ENST00000549007 LINC00482Q8N8I6 264 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 GMCL1P1Q8NEA9 526 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 SLC30A5Q8TAD4 765 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 LRIG1Q96JA1 1093 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 ZBTB45Q96K62 511 aaPredicted RBP4.12□□□□□ -1.75
APAF1-208ENST00000549007 C12orf42Q96LP6 360 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 PIGSQ96S52 555 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 SLF1Q9BQI6 1058 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 RMI1Q9H9A7 625 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 FBXO2Q9UK22 296 aaPredicted RBP4.12□□□□□ -1.75
APAF1-208ENST00000549007 GJD2Q9UKL4 321 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 SLC45A1Q9Y2W3 748 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 MTO1Q9Y2Z2 717 aaKnown RBP4.12□□□□□ -1.75
APAF1-208ENST00000549007 CCDC78A2IDD5 438 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 FIBPO43427 364 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 JAK2O60674 1132 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 HNRNPA1P09651 372 aaKnown RBP eCLIP4.12□□□□□ -1.75
APAF1-208ENST00000549007 FCER1AP12319 257 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 GZMKP49863 264 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 STAT2P52630 851 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 ANKRD23Q86SG2 305 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 SGMS1Q86VZ5 419 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 GATAD2AQ86YP4 633 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 HERC6Q8IVU3 1022 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 ADGRF4Q8IZF3 695 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 MB21D1Q8N884 522 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 ANKRD52Q8NB46 1076 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 CTCFLQ8NI51 663 aaPredicted RBP4.12□□□□□ -1.75
APAF1-208ENST00000549007 CYP2W1Q8TAV3 490 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 LPAR1Q92633 364 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 STAMQ92783 540 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 GRAMD1AQ96CP6 724 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 SNX27Q96L92 541 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 BRD8Q9H0E9 1235 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 PORCNQ9H237 461 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 GCM1Q9NP62 436 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 PRDM8Q9NQV8 689 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 ZSWIM8A7E2V4 1837 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 KIF28PB7ZC32 967 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 ABLIM1O14639 778 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 AREL1O15033 823 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 FOXN1O15353 648 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 TIMM44O43615 452 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 CNMDO75829 334 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 HSPA1AP0DMV8 641 aaKnown RBP4.12□□□□□ -1.75
APAF1-208ENST00000549007 HSPA1BP0DMV9 641 aaKnown RBP4.12□□□□□ -1.75
APAF1-208ENST00000549007 VSIG10L2P0DP72 767 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 SNHG28P0DPA3 235 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 MTHFD1P11586 935 aaKnown RBP4.12□□□□□ -1.75
APAF1-208ENST00000549007 CTGFP29279 349 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 MAP2K2P36507 400 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 CASP2P42575 452 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 CPT1AP50416 773 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 SP140Q13342 867 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 COG2Q14746 738 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 UBXN2BQ14CS0 331 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 ARMC3Q5W041 872 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 PLAG1Q6DJT9 500 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 PARK7Q99497 189 aaKnown RBP4.12□□□□□ -1.75
APAF1-208ENST00000549007 AGO3Q9H9G7 860 aaKnown RBP4.12□□□□□ -1.75
APAF1-208ENST00000549007 JMJD4Q9H9V9 463 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 IRAK4Q9NWZ3 460 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 CLIC5Q9NZA1 410 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 JKAMPQ9P055 326 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 HPSEQ9Y251 543 aa4.12□□□□□ -1.75
APAF1-208ENST00000549007 RIPK3Q9Y572 518 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms