RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 L1CAMP32004 1257 aa21.79■■□□□ 1.08
CACNB3-210ENST00000548874 SGSHP51688 502 aa21.79■■□□□ 1.08
CACNB3-210ENST00000548874 GAD2Q05329 585 aa21.79■■□□□ 1.08
CACNB3-210ENST00000548874 CA9Q16790 459 aa21.79■■□□□ 1.08
CACNB3-210ENST00000548874 KCNT1Q5JUK3 1230 aa21.79■■□□□ 1.08
CACNB3-210ENST00000548874 MPP7Q5T2T1 576 aa21.79■■□□□ 1.08
CACNB3-210ENST00000548874 FAM72AQ5TYM5 149 aa21.79■■□□□ 1.08
CACNB3-210ENST00000548874 LRRC38Q5VT99 294 aa21.79■■□□□ 1.08
CACNB3-210ENST00000548874 FAM72DQ6L9T8 149 aa21.79■■□□□ 1.08
CACNB3-210ENST00000548874 POLNQ7Z5Q5 900 aa21.79■■□□□ 1.08
CACNB3-210ENST00000548874 FAM72BQ86X60 149 aa21.79■■□□□ 1.08
CACNB3-210ENST00000548874 UBALD2Q8IYN6 164 aa21.79■■□□□ 1.08
CACNB3-210ENST00000548874 PYROXD2Q8N2H3 581 aa21.79■■□□□ 1.08
CACNB3-210ENST00000548874 KIAA1524Q8TCG1 905 aa21.79■■□□□ 1.08
CACNB3-210ENST00000548874 CSGALNACT1Q8TDX6 532 aa21.79■■□□□ 1.08
CACNB3-210ENST00000548874 CD101Q93033 1021 aa21.79■■□□□ 1.08
CACNB3-210ENST00000548874 TMA16Q96EY4 203 aaKnown RBP21.79■■□□□ 1.08
CACNB3-210ENST00000548874 ZWILCHQ9H900 591 aa21.79■■□□□ 1.08
CACNB3-210ENST00000548874 OR12D3Q9UGF7 316 aa21.79■■□□□ 1.08
CACNB3-210ENST00000548874 MUTYHQ9UIF7 546 aa21.79■■□□□ 1.08
CACNB3-210ENST00000548874 VANGL2Q9ULK5 521 aa21.79■■□□□ 1.08
CACNB3-210ENST00000548874 DRGXA6NNA5 263 aa21.78■■□□□ 1.08
CACNB3-210ENST00000548874 SPOPO43791 374 aa21.78■■□□□ 1.08
CACNB3-210ENST00000548874 PALMO75781 387 aa21.78■■□□□ 1.08
CACNB3-210ENST00000548874 CYBBP04839 570 aa21.78■■□□□ 1.08
CACNB3-210ENST00000548874 KRT7P08729 469 aa21.78■■□□□ 1.08
CACNB3-210ENST00000548874 SSR1P43307 286 aaKnown RBP21.78■■□□□ 1.08
CACNB3-210ENST00000548874 RPS24P62847 133 aaKnown RBP21.78■■□□□ 1.08
CACNB3-210ENST00000548874 NR1H3Q13133 447 aa21.78■■□□□ 1.08
CACNB3-210ENST00000548874 DPYSL2Q16555 572 aa21.78■■□□□ 1.08
CACNB3-210ENST00000548874 SMTNL2Q2TAL5 461 aa21.78■■□□□ 1.08
CACNB3-210ENST00000548874 HS1BP3Q53T59 392 aa21.78■■□□□ 1.08
CACNB3-210ENST00000548874 SYCE1Q8N0S2 351 aa21.78■■□□□ 1.08
CACNB3-210ENST00000548874 HJURPQ8NCD3 748 aaPredicted RBP21.78■■□□□ 1.08
CACNB3-210ENST00000548874 IGSF8Q969P0 613 aa21.78■■□□□ 1.08
CACNB3-210ENST00000548874 CHFRQ96EP1 664 aa21.78■■□□□ 1.08
CACNB3-210ENST00000548874 BBS2Q9BXC9 721 aa21.78■■□□□ 1.08
CACNB3-210ENST00000548874 DHX35Q9H5Z1 703 aaKnown RBP21.78■■□□□ 1.08
CACNB3-210ENST00000548874 NEU3Q9UQ49 428 aa21.78■■□□□ 1.08
CACNB3-210ENST00000548874 E9PAM4 449 aa21.77■■□□□ 1.08
CACNB3-210ENST00000548874 LRIG2O94898 1065 aa21.77■■□□□ 1.08
CACNB3-210ENST00000548874 HOXD9P28356 352 aaPredicted RBP21.77■■□□□ 1.08
CACNB3-210ENST00000548874 GJA4P35212 333 aa21.77■■□□□ 1.08
CACNB3-210ENST00000548874 ANO4Q32M45 955 aa21.77■■□□□ 1.08
CACNB3-210ENST00000548874 RABGAP1LQ5R372 815 aa21.77■■□□□ 1.08
CACNB3-210ENST00000548874 IER5LQ5T953 404 aa21.77■■□□□ 1.08
CACNB3-210ENST00000548874 TTC39BQ5VTQ0 682 aaPredicted RBP21.77■■□□□ 1.08
CACNB3-210ENST00000548874 RHOT1Q8IXI2 618 aa21.77■■□□□ 1.08
CACNB3-210ENST00000548874 ETFBKMTQ8IXQ9 262 aa21.77■■□□□ 1.08
CACNB3-210ENST00000548874 CCAR2Q8N163 923 aaKnown RBP21.77■■□□□ 1.08
CACNB3-210ENST00000548874 TTC8Q8TAM2 541 aa21.77■■□□□ 1.08
CACNB3-210ENST00000548874 FAM71BQ8TC56 605 aa21.77■■□□□ 1.08
CACNB3-210ENST00000548874 RPRD1AQ96P16 312 aaPredicted RBP21.77■■□□□ 1.08
CACNB3-210ENST00000548874 KCTD15Q96SI1 283 aaPredicted RBP21.77■■□□□ 1.08
CACNB3-210ENST00000548874 KCND1Q9NSA2 647 aa21.77■■□□□ 1.08
CACNB3-210ENST00000548874 PPARGC1AQ9UBK2 798 aaKnown RBP21.77■■□□□ 1.08
CACNB3-210ENST00000548874 USP27XA6NNY8 438 aa21.76■■□□□ 1.07
CACNB3-210ENST00000548874 NEDD8-MDP1E9PL57 170 aa21.76■■□□□ 1.07
CACNB3-210ENST00000548874 PSTPIP1O43586 416 aa21.76■■□□□ 1.07
CACNB3-210ENST00000548874 CACNG3O60359 315 aa21.76■■□□□ 1.07
CACNB3-210ENST00000548874 TYRP14679 529 aa21.76■■□□□ 1.07
CACNB3-210ENST00000548874 GLULP15104 373 aa21.76■■□□□ 1.07
CACNB3-210ENST00000548874 HOXC13P31276 330 aa21.76■■□□□ 1.07
CACNB3-210ENST00000548874 IRAK1P51617 712 aa21.76■■□□□ 1.07
CACNB3-210ENST00000548874 ARSEP51690 589 aa21.76■■□□□ 1.07
CACNB3-210ENST00000548874 ATP13A4Q4VNC1 1196 aa21.76■■□□□ 1.07
CACNB3-210ENST00000548874 LRRC31Q6UY01 552 aa21.76■■□□□ 1.07
CACNB3-210ENST00000548874 NT5DC3Q86UY8 548 aa21.76■■□□□ 1.07
CACNB3-210ENST00000548874 DDI1Q8WTU0 396 aa21.76■■□□□ 1.07
CACNB3-210ENST00000548874 HSPH1Q92598 858 aa21.76■■□□□ 1.07
CACNB3-210ENST00000548874 C8orf33Q9H7E9 229 aaPredicted RBP21.76■■□□□ 1.07
CACNB3-210ENST00000548874 HEBP1Q9NRV9 189 aa21.76■■□□□ 1.07
CACNB3-210ENST00000548874 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.76■■□□□ 1.07
CACNB3-210ENST00000548874 TRMT1Q9NXH9 659 aaKnown RBP21.76■■□□□ 1.07
CACNB3-210ENST00000548874 PLK2Q9NYY3 685 aa21.76■■□□□ 1.07
CACNB3-210ENST00000548874 WNT16Q9UBV4 365 aa21.76■■□□□ 1.07
CACNB3-210ENST00000548874 MYOFQ9NZM1 2061 aa21.75■■□□□ 1.07
CACNB3-210ENST00000548874 TYW5A2RUC4 315 aaKnown RBP21.75■■□□□ 1.07
CACNB3-210ENST00000548874 TBL1XO60907 577 aa21.75■■□□□ 1.07
CACNB3-210ENST00000548874 CTHP32929 405 aa21.75■■□□□ 1.07
CACNB3-210ENST00000548874 HTR7P34969 479 aa21.75■■□□□ 1.07
CACNB3-210ENST00000548874 GJC1P36383 396 aa21.75■■□□□ 1.07
CACNB3-210ENST00000548874 SOX9P48436 509 aa21.75■■□□□ 1.07
CACNB3-210ENST00000548874 ZNF135P52742 658 aaPredicted RBP21.75■■□□□ 1.07
CACNB3-210ENST00000548874 SLC44A4Q53GD3 710 aa21.75■■□□□ 1.07
CACNB3-210ENST00000548874 C12orf40Q86WS4 652 aa21.75■■□□□ 1.07
CACNB3-210ENST00000548874 CFAP52Q8N1V2 620 aa21.75■■□□□ 1.07
CACNB3-210ENST00000548874 BHMTQ93088 406 aa21.75■■□□□ 1.07
CACNB3-210ENST00000548874 TBC1D31Q96DN5 1066 aa21.75■■□□□ 1.07
CACNB3-210ENST00000548874 MSANTD3Q96H12 275 aa21.75■■□□□ 1.07
CACNB3-210ENST00000548874 EPAS1Q99814 870 aa21.75■■□□□ 1.07
CACNB3-210ENST00000548874 PCDH18Q9HCL0 1135 aa21.75■■□□□ 1.07
CACNB3-210ENST00000548874 FBXO10Q9UK96 956 aa21.75■■□□□ 1.07
CACNB3-210ENST00000548874 PIAS3Q9Y6X2 628 aa21.75■■□□□ 1.07
CACNB3-210ENST00000548874 A0A1B0GVM2 712 aa21.74■■□□□ 1.07
CACNB3-210ENST00000548874 GOLGA6L9A6NEM1 432 aa21.74■■□□□ 1.07
CACNB3-210ENST00000548874 TCAF2A6NFQ2 919 aa21.74■■□□□ 1.07
CACNB3-210ENST00000548874 SHISA7A6NL88 538 aa21.74■■□□□ 1.07
CACNB3-210ENST00000548874 SPECC1L-ADORA2AF8WAN1 911 aa21.74■■□□□ 1.07
CACNB3-210ENST00000548874 SRGAP2O75044 1071 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms