RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 CCR1P32246 355 aa16.34■□□□□ 0.21
DDX54-205ENST00000548786 FLT3P36888 993 aa16.34■□□□□ 0.21
DDX54-205ENST00000548786 MATKP42679 507 aa16.34■□□□□ 0.21
DDX54-205ENST00000548786 IL12RB1P42701 662 aa16.34■□□□□ 0.21
DDX54-205ENST00000548786 NSFP46459 744 aaKnown RBP16.34■□□□□ 0.21
DDX54-205ENST00000548786 ATXN1P54253 815 aaKnown RBP16.34■□□□□ 0.21
DDX54-205ENST00000548786 CENPCQ03188 943 aa16.34■□□□□ 0.21
DDX54-205ENST00000548786 SPEM2Q0P670 501 aa16.34■□□□□ 0.21
DDX54-205ENST00000548786 CDH18Q13634 790 aa16.34■□□□□ 0.21
DDX54-205ENST00000548786 ZNF234Q14588 700 aa16.34■□□□□ 0.21
DDX54-205ENST00000548786 USP39Q53GS9 565 aaKnown RBP16.34■□□□□ 0.21
DDX54-205ENST00000548786 TRNP1Q6NT89 227 aa16.34■□□□□ 0.21
DDX54-205ENST00000548786 ZNF366Q8N895 744 aa16.34■□□□□ 0.21
DDX54-205ENST00000548786 ZNF397Q8NF99 534 aaPredicted RBP16.34■□□□□ 0.21
DDX54-205ENST00000548786 UCMAQ8WVF2 138 aa16.34■□□□□ 0.21
DDX54-205ENST00000548786 TMPRSS4Q9NRS4 437 aa16.34■□□□□ 0.21
DDX54-205ENST00000548786 PIGVQ9NUD9 493 aa16.34■□□□□ 0.21
DDX54-205ENST00000548786 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.34■□□□□ 0.21
DDX54-205ENST00000548786 SLC12A6Q9UHW9 1150 aa16.34■□□□□ 0.21
DDX54-205ENST00000548786 SNX10Q9Y5X0 201 aa16.34■□□□□ 0.21
DDX54-205ENST00000548786 LRRC53A6NM62 1247 aa16.33■□□□□ 0.2
DDX54-205ENST00000548786 F5H5T6 163 aa16.33■□□□□ 0.2
DDX54-205ENST00000548786 GOLGA6L19H0YKK7 550 aa16.33■□□□□ 0.2
DDX54-205ENST00000548786 SLC2A3P11169 496 aa16.33■□□□□ 0.2
DDX54-205ENST00000548786 HLA-EP13747 358 aa16.33■□□□□ 0.2
DDX54-205ENST00000548786 GABRG2P18507 467 aa16.33■□□□□ 0.2
DDX54-205ENST00000548786 NDUFV2P19404 249 aa16.33■□□□□ 0.2
DDX54-205ENST00000548786 PRKCHP24723 683 aa16.33■□□□□ 0.2
DDX54-205ENST00000548786 FANCCQ00597 558 aa16.33■□□□□ 0.2
DDX54-205ENST00000548786 DEUP1Q05D60 604 aa16.33■□□□□ 0.2
DDX54-205ENST00000548786 LMAN2Q12907 356 aa16.33■□□□□ 0.2
DDX54-205ENST00000548786 CLEC16AQ2KHT3 1053 aa16.33■□□□□ 0.2
DDX54-205ENST00000548786 SKOR2Q2VWA4 1001 aaPredicted RBP16.33■□□□□ 0.2
DDX54-205ENST00000548786 FUT11Q495W5 492 aa16.33■□□□□ 0.2
DDX54-205ENST00000548786 FNDC3BQ53EP0 1204 aaKnown RBP16.33■□□□□ 0.2
DDX54-205ENST00000548786 FSCBQ5H9T9 825 aa16.33■□□□□ 0.2
DDX54-205ENST00000548786 SERPINA13PQ6UXR4 307 aa16.33■□□□□ 0.2
DDX54-205ENST00000548786 CFAP57Q96MR6 1250 aa16.33■□□□□ 0.2
DDX54-205ENST00000548786 NPY6RQ99463 290 aa16.33■□□□□ 0.2
DDX54-205ENST00000548786 GABRG3Q99928 467 aa16.33■□□□□ 0.2
DDX54-205ENST00000548786 AGPAT1Q99943 283 aa16.33■□□□□ 0.2
DDX54-205ENST00000548786 SIK2Q9H0K1 926 aa16.33■□□□□ 0.2
DDX54-205ENST00000548786 PARD6AQ9NPB6 346 aa16.33■□□□□ 0.2
DDX54-205ENST00000548786 THAP10Q9P2Z0 257 aaPredicted RBP16.33■□□□□ 0.2
DDX54-205ENST00000548786 STAP1Q9ULZ2 295 aa16.33■□□□□ 0.2
DDX54-205ENST00000548786 H0Y626 953 aa16.32■□□□□ 0.2
DDX54-205ENST00000548786 PAGE1O75459 146 aa16.32■□□□□ 0.2
DDX54-205ENST00000548786 LUC7L3O95232 432 aaKnown RBP16.32■□□□□ 0.2
DDX54-205ENST00000548786 ADCY5O95622 1261 aa16.32■□□□□ 0.2
DDX54-205ENST00000548786 EPHX1P07099 455 aa16.32■□□□□ 0.2
DDX54-205ENST00000548786 FERP16591 822 aa16.32■□□□□ 0.2
DDX54-205ENST00000548786 MMP8P22894 467 aa16.32■□□□□ 0.2
DDX54-205ENST00000548786 IRAK1P51617 712 aa16.32■□□□□ 0.2
DDX54-205ENST00000548786 ATP11AP98196 1134 aa16.32■□□□□ 0.2
DDX54-205ENST00000548786 EIF4EBP2Q13542 120 aaPredicted RBP16.32■□□□□ 0.2
DDX54-205ENST00000548786 CDO1Q16878 200 aa16.32■□□□□ 0.2
DDX54-205ENST00000548786 PLK5Q496M5 336 aa16.32■□□□□ 0.2
DDX54-205ENST00000548786 RAB6CQ53S08 254 aa16.32■□□□□ 0.2
DDX54-205ENST00000548786 MBLAC2Q68D91 279 aa16.32■□□□□ 0.2
DDX54-205ENST00000548786 KIAA1324Q6UXG2 1013 aaKnown RBP16.32■□□□□ 0.2
DDX54-205ENST00000548786 TRIM72Q6ZMU5 477 aa16.32■□□□□ 0.2
DDX54-205ENST00000548786 SND1Q7KZF4 910 aaKnown RBP eCLIP16.32■□□□□ 0.2
DDX54-205ENST00000548786 ARMCX6Q7L4S7 300 aa16.32■□□□□ 0.2
DDX54-205ENST00000548786 ADIPOR2Q86V24 386 aa16.32■□□□□ 0.2
DDX54-205ENST00000548786 CCDC117Q8IWD4 279 aaPredicted RBP16.32■□□□□ 0.2
DDX54-205ENST00000548786 AHI1Q8N157 1196 aa16.32■□□□□ 0.2
DDX54-205ENST00000548786 BAP1Q92560 729 aa16.32■□□□□ 0.2
DDX54-205ENST00000548786 TKTL2Q9H0I9 626 aa16.32■□□□□ 0.2
DDX54-205ENST00000548786 RAB6CQ9H0N0 254 aa16.32■□□□□ 0.2
DDX54-205ENST00000548786 ARRDC1-AS1Q9H2J1 176 aa16.32■□□□□ 0.2
DDX54-205ENST00000548786 SMOC1Q9H4F8 434 aa16.32■□□□□ 0.2
DDX54-205ENST00000548786 CD93Q9NPY3 652 aa16.32■□□□□ 0.2
DDX54-205ENST00000548786 ANLNQ9NQW6 1124 aa16.32■□□□□ 0.2
DDX54-205ENST00000548786 ADAM22Q9P0K1 906 aa16.32■□□□□ 0.2
DDX54-205ENST00000548786 VANGL2Q9ULK5 521 aa16.32■□□□□ 0.2
DDX54-205ENST00000548786 HS3ST4Q9Y661 456 aa16.32■□□□□ 0.2
DDX54-205ENST00000548786 SPTBN4Q9H254 2564 aa16.32■□□□□ 0.2
DDX54-205ENST00000548786 TMCO5BA8MYB1 307 aa16.31■□□□□ 0.2
DDX54-205ENST00000548786 ZBTB24O43167 697 aaPredicted RBP16.31■□□□□ 0.2
DDX54-205ENST00000548786 MAP3K13O43283 966 aa16.31■□□□□ 0.2
DDX54-205ENST00000548786 SYNCRIPO60506 623 aaKnown RBP16.31■□□□□ 0.2
DDX54-205ENST00000548786 RETP07949 1114 aa16.31■□□□□ 0.2
DDX54-205ENST00000548786 UNGP13051 313 aaPredicted RBP16.31■□□□□ 0.2
DDX54-205ENST00000548786 POLR2EP19388 210 aaKnown RBP16.31■□□□□ 0.2
DDX54-205ENST00000548786 AUHQ13825 339 aaKnown RBP16.31■□□□□ 0.2
DDX54-205ENST00000548786 STARD3Q14849 445 aa16.31■□□□□ 0.2
DDX54-205ENST00000548786 NR1I3Q14994 352 aa16.31■□□□□ 0.2
DDX54-205ENST00000548786 EIF4HQ15056 248 aaKnown RBP16.31■□□□□ 0.2
DDX54-205ENST00000548786 ELF2Q15723 593 aa16.31■□□□□ 0.2
DDX54-205ENST00000548786 ASIC2Q16515 512 aa16.31■□□□□ 0.2
DDX54-205ENST00000548786 SLC25A52Q3SY17 297 aa16.31■□□□□ 0.2
DDX54-205ENST00000548786 MPP7Q5T2T1 576 aa16.31■□□□□ 0.2
DDX54-205ENST00000548786 E4F1Q66K89 784 aaPredicted RBP16.31■□□□□ 0.2
DDX54-205ENST00000548786 FBXL22Q6P050 247 aa16.31■□□□□ 0.2
DDX54-205ENST00000548786 C14orf80Q86SX3 495 aa16.31■□□□□ 0.2
DDX54-205ENST00000548786 DEFB119Q8N690 84 aa16.31■□□□□ 0.2
DDX54-205ENST00000548786 JOSD2Q8TAC2 188 aa16.31■□□□□ 0.2
DDX54-205ENST00000548786 WFIKKN2Q8TEU8 576 aa16.31■□□□□ 0.2
DDX54-205ENST00000548786 IGSF8Q969P0 613 aa16.31■□□□□ 0.2
DDX54-205ENST00000548786 SPACA7Q96KW9 195 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms