RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 LOC105369274A0A096LPK9 316 aa4.57□□□□□ -1.68
CCDC38-206ENST00000548771 LOC102723532A0A0G2JNH3 316 aa4.57□□□□□ -1.68
CCDC38-206ENST00000548771 EME2A4GXA9 379 aaPredicted RBP4.57□□□□□ -1.68
CCDC38-206ENST00000548771 CLEC18AA5D8T8 446 aa4.57□□□□□ -1.68
CCDC38-206ENST00000548771 ZC3H11AO75152 810 aaKnown RBP eCLIP4.57□□□□□ -1.68
CCDC38-206ENST00000548771 TAF5LO75529 589 aa4.57□□□□□ -1.68
CCDC38-206ENST00000548771 NTSR2O95665 410 aa4.57□□□□□ -1.68
CCDC38-206ENST00000548771 NGFRP08138 427 aa4.57□□□□□ -1.68
CCDC38-206ENST00000548771 T-ENOLP0DO92 83 aa4.57□□□□□ -1.68
CCDC38-206ENST00000548771 CHRNB1P11230 501 aa4.57□□□□□ -1.68
CCDC38-206ENST00000548771 PLA2G2AP14555 144 aa4.57□□□□□ -1.68
CCDC38-206ENST00000548771 IGFBP2P18065 325 aa4.57□□□□□ -1.68
CCDC38-206ENST00000548771 ZXDBP98169 803 aa4.57□□□□□ -1.68
CCDC38-206ENST00000548771 ARL13BQ3SXY8 428 aa4.57□□□□□ -1.68
CCDC38-206ENST00000548771 B4GALNT4Q76KP1 1039 aa4.57□□□□□ -1.68
CCDC38-206ENST00000548771 FMNL3Q8IVF7 1028 aa4.57□□□□□ -1.68
CCDC38-206ENST00000548771 ANKRD13AQ8IZ07 590 aa4.57□□□□□ -1.68
CCDC38-206ENST00000548771 OR4N4Q8N0Y3 316 aa4.57□□□□□ -1.68
CCDC38-206ENST00000548771 CLEC18CQ8NCF0 446 aa4.57□□□□□ -1.68
CCDC38-206ENST00000548771 TBCBQ99426 244 aa4.57□□□□□ -1.68
CCDC38-206ENST00000548771 TRIM2Q9C040 744 aa4.57□□□□□ -1.68
CCDC38-206ENST00000548771 IPO11Q9UI26 975 aaKnown RBP4.57□□□□□ -1.68
CCDC38-206ENST00000548771 CA14Q9ULX7 337 aa4.57□□□□□ -1.68
CCDC38-206ENST00000548771 PCDHA7Q9UN72 937 aa4.57□□□□□ -1.68
CCDC38-206ENST00000548771 FAM234BA2RU67 622 aa4.56□□□□□ -1.68
CCDC38-206ENST00000548771 FGF18O76093 207 aa4.56□□□□□ -1.68
CCDC38-206ENST00000548771 CNTN5O94779 1100 aa4.56□□□□□ -1.68
CCDC38-206ENST00000548771 ITGA5P08648 1049 aa4.56□□□□□ -1.68
CCDC38-206ENST00000548771 IDEP14735 1019 aa4.56□□□□□ -1.68
CCDC38-206ENST00000548771 SLC37A1P57057 533 aa4.56□□□□□ -1.68
CCDC38-206ENST00000548771 C6orf10Q5SRN2 563 aa4.56□□□□□ -1.68
CCDC38-206ENST00000548771 C18orf65Q6ZTR6 163 aa4.56□□□□□ -1.68
CCDC38-206ENST00000548771 WDR75Q8IWA0 830 aaKnown RBP4.56□□□□□ -1.68
CCDC38-206ENST00000548771 DDIASQ8IXT1 998 aa4.56□□□□□ -1.68
CCDC38-206ENST00000548771 TMEM199Q8N511 208 aa4.56□□□□□ -1.68
CCDC38-206ENST00000548771 SLC22A17Q8WUG5 538 aa4.56□□□□□ -1.68
CCDC38-206ENST00000548771 INPP5DQ92835 1189 aa4.56□□□□□ -1.68
CCDC38-206ENST00000548771 PMM1Q92871 262 aa4.56□□□□□ -1.68
CCDC38-206ENST00000548771 MIB2Q96AX9 1013 aa4.56□□□□□ -1.68
CCDC38-206ENST00000548771 TMEM204Q9BSN7 226 aa4.56□□□□□ -1.68
CCDC38-206ENST00000548771 ARHGAP39Q9C0H5 1083 aa4.56□□□□□ -1.68
CCDC38-206ENST00000548771 SELENONQ9NZV5 590 aa4.56□□□□□ -1.68
CCDC38-206ENST00000548771 KLHL42Q9P2K6 505 aa4.56□□□□□ -1.68
CCDC38-206ENST00000548771 UBE2J1Q9Y385 318 aaPredicted RBP4.56□□□□□ -1.68
CCDC38-206ENST00000548771 LMTK3Q96Q04 1460 aa4.56□□□□□ -1.68
CCDC38-206ENST00000548771 PRSS44E7EML9 344 aa4.55□□□□□ -1.68
CCDC38-206ENST00000548771 TNFRSF8P28908 595 aa4.55□□□□□ -1.68
CCDC38-206ENST00000548771 TM4SF4P48230 202 aa4.55□□□□□ -1.68
CCDC38-206ENST00000548771 PPATQ06203 517 aa4.55□□□□□ -1.68
CCDC38-206ENST00000548771 SLC35G1Q2M3R5 365 aa4.55□□□□□ -1.68
CCDC38-206ENST00000548771 TRAPPC11Q7Z392 1133 aa4.55□□□□□ -1.68
CCDC38-206ENST00000548771 ADGRF3Q8IZF5 1079 aa4.55□□□□□ -1.68
CCDC38-206ENST00000548771 TMEM174Q8WUU8 243 aa4.55□□□□□ -1.68
CCDC38-206ENST00000548771 MYLK2Q9H1R3 596 aa4.55□□□□□ -1.68
CCDC38-206ENST00000548771 SLCO5A1Q9H2Y9 848 aa4.55□□□□□ -1.68
CCDC38-206ENST00000548771 MAP6D1Q9H9H5 199 aa4.55□□□□□ -1.68
CCDC38-206ENST00000548771 TXNRD2Q9NNW7 524 aa4.55□□□□□ -1.68
CCDC38-206ENST00000548771 NECTIN3Q9NQS3 549 aa4.55□□□□□ -1.68
CCDC38-206ENST00000548771 ANAPC4Q9UJX5 808 aa4.55□□□□□ -1.68
CCDC38-206ENST00000548771 DOCK7Q96N67 2140 aa4.54□□□□□ -1.68
CCDC38-206ENST00000548771 J3KTA2 159 aa4.54□□□□□ -1.68
CCDC38-206ENST00000548771 APAF1O14727 1248 aa4.54□□□□□ -1.68
CCDC38-206ENST00000548771 TNFRSF13BO14836 293 aaPredicted RBP4.54□□□□□ -1.68
CCDC38-206ENST00000548771 MDM4O15151 490 aa4.54□□□□□ -1.68
CCDC38-206ENST00000548771 NKX2-8O15522 239 aa4.54□□□□□ -1.68
CCDC38-206ENST00000548771 NCK2O43639 380 aa4.54□□□□□ -1.68
CCDC38-206ENST00000548771 HARSP12081 509 aaKnown RBP4.54□□□□□ -1.68
CCDC38-206ENST00000548771 TRIM27P14373 513 aa4.54□□□□□ -1.68
CCDC38-206ENST00000548771 TGM2P21980 687 aa4.54□□□□□ -1.68
CCDC38-206ENST00000548771 RFX2P48378 723 aa4.54□□□□□ -1.68
CCDC38-206ENST00000548771 IFIT5Q13325 482 aaKnown RBP4.54□□□□□ -1.68
CCDC38-206ENST00000548771 PMS2P11Q13670 270 aa4.54□□□□□ -1.68
CCDC38-206ENST00000548771 CSHL1Q14406 222 aa4.54□□□□□ -1.68
CCDC38-206ENST00000548771 SAFBQ15424 915 aaKnown RBP eCLIP4.54□□□□□ -1.68
CCDC38-206ENST00000548771 ZNF585BQ52M93 769 aa4.54□□□□□ -1.68
CCDC38-206ENST00000548771 COBLL1Q53SF7 1204 aa4.54□□□□□ -1.68
CCDC38-206ENST00000548771 SLC39A5Q6ZMH5 540 aa4.54□□□□□ -1.68
CCDC38-206ENST00000548771 RASGRP3Q8IV61 690 aa4.54□□□□□ -1.68
CCDC38-206ENST00000548771 IQCF1Q8N6M8 205 aa4.54□□□□□ -1.68
CCDC38-206ENST00000548771 KAT2AQ92830 837 aa4.54□□□□□ -1.68
CCDC38-206ENST00000548771 MCRS1Q96EZ8 462 aa4.54□□□□□ -1.68
CCDC38-206ENST00000548771 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.54□□□□□ -1.68
CCDC38-206ENST00000548771 AAMDCQ9H7C9 122 aa4.54□□□□□ -1.68
CCDC38-206ENST00000548771 PRDM16Q9HAZ2 1276 aa4.54□□□□□ -1.68
CCDC38-206ENST00000548771 FBXO28Q9NVF7 368 aa4.54□□□□□ -1.68
CCDC38-206ENST00000548771 PCDHB7Q9Y5E2 793 aa4.54□□□□□ -1.68
CCDC38-206ENST00000548771 LACTBL1A8MY62 500 aa4.53□□□□□ -1.68
CCDC38-206ENST00000548771 FOXO6A8MYZ6 492 aa4.53□□□□□ -1.68
CCDC38-206ENST00000548771 PCDH17O14917 1159 aa4.53□□□□□ -1.68
CCDC38-206ENST00000548771 SRGAP2BP0DMP2 458 aa4.53□□□□□ -1.68
CCDC38-206ENST00000548771 FOXL2P58012 376 aa4.53□□□□□ -1.68
CCDC38-206ENST00000548771 AAK1Q2M2I8 961 aa4.53□□□□□ -1.68
CCDC38-206ENST00000548771 FAM209BQ5JX69 171 aa4.53□□□□□ -1.68
CCDC38-206ENST00000548771 PDXDC1Q6P996 788 aa4.53□□□□□ -1.68
CCDC38-206ENST00000548771 DPP9Q86TI2 863 aa4.53□□□□□ -1.68
CCDC38-206ENST00000548771 RBM23Q86U06 439 aaKnown RBP4.53□□□□□ -1.68
CCDC38-206ENST00000548771 GPSM1Q86YR5 675 aa4.53□□□□□ -1.68
CCDC38-206ENST00000548771 TXLNBQ8N3L3 684 aa4.53□□□□□ -1.68
CCDC38-206ENST00000548771 SRFBP1Q8NEF9 429 aaKnown RBP4.53□□□□□ -1.68
CCDC38-206ENST00000548771 OIT3Q8WWZ8 545 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms