RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 C12orf29Q8N999 325 aa10.15□□□□□ -0.78
SMARCD1-205ENST00000548573 TFB1MQ8WVM0 346 aaKnown RBP10.15□□□□□ -0.78
SMARCD1-205ENST00000548573 ARNTL2Q8WYA1 636 aa10.15□□□□□ -0.78
SMARCD1-205ENST00000548573 JDP2Q8WYK2 163 aa10.15□□□□□ -0.78
SMARCD1-205ENST00000548573 ISL2Q96A47 359 aa10.15□□□□□ -0.78
SMARCD1-205ENST00000548573 ZNF668Q96K58 619 aaPredicted RBP10.15□□□□□ -0.78
SMARCD1-205ENST00000548573 CSPG4P5Q96PW8 444 aa10.15□□□□□ -0.78
SMARCD1-205ENST00000548573 RTKNQ9BST9 563 aa10.15□□□□□ -0.78
SMARCD1-205ENST00000548573 DHX35Q9H5Z1 703 aaKnown RBP10.15□□□□□ -0.78
SMARCD1-205ENST00000548573 PRDM16Q9HAZ2 1276 aa10.15□□□□□ -0.78
SMARCD1-205ENST00000548573 MTMR10Q9NXD2 777 aa10.15□□□□□ -0.78
SMARCD1-205ENST00000548573 DTLQ9NZJ0 730 aa10.15□□□□□ -0.78
SMARCD1-205ENST00000548573 TMEM216Q9P0N5 145 aa10.15□□□□□ -0.78
SMARCD1-205ENST00000548573 PCDHB12Q9Y5F1 795 aa10.15□□□□□ -0.78
SMARCD1-205ENST00000548573 CDY2AQ9Y6F7 541 aa10.15□□□□□ -0.78
SMARCD1-205ENST00000548573 CDY1Q9Y6F8 540 aa10.15□□□□□ -0.78
SMARCD1-205ENST00000548573 A0A0G2JMZ2 1700 aa10.15□□□□□ -0.78
SMARCD1-205ENST00000548573 LRRC37A2A6NM11 1700 aa10.15□□□□□ -0.78
SMARCD1-205ENST00000548573 H3BNX3 289 aa10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 NOP56O00567 594 aaKnown RBP10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 OPHN1O60890 802 aa10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 COX4I1P13073 169 aa10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 ARRB2P32121 409 aa10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 GP5P40197 560 aa10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 MAGEA12P43365 314 aa10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 PHKA2P46019 1235 aa10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 CLCN2P51788 898 aa10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 TBL3Q12788 808 aaKnown RBP10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 LSAMPQ13449 338 aa10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 TRIP10Q15642 601 aa10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 LRRC36Q1X8D7 754 aa10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 HSDL1Q3SXM5 330 aa10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 MMEL1Q495T6 779 aa10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 SH3D19Q5HYK7 790 aa10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 CELF3Q5SZQ8 465 aaKnown RBP10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 PPP1R26Q5T8A7 1209 aaPredicted RBP10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 GRTP1Q5TC63 336 aa10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 OGFRL1Q5TC84 451 aaPredicted RBP10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 EPGNQ6UW88 154 aa10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 FRMD7Q6ZUT3 714 aa10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 SAMD7Q7Z3H4 446 aa10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 RSPH3Q86UC2 560 aa10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 SCUBE3Q8IX30 993 aa10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 COLGALT1Q8NBJ5 622 aa10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 CLMNQ96JQ2 1002 aa10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 CPNE1Q99829 537 aa10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 C6orf203Q9P0P8 240 aaPredicted RBP10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 TXNDC16Q9P2K2 825 aa10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 ADAM28Q9UKQ2 775 aa10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 AP4E1Q9UPM8 1137 aa10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 PDLIM1O00151 329 aa10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 HBP1O60381 514 aa10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 SORBS2O94875 1100 aaKnown RBP10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 ARIH2O95376 493 aa10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 CPA3P15088 417 aa10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 VAV1P15498 845 aa10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 NCF2P19878 526 aaPredicted RBP10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 MGAT1P26572 445 aa10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 TYK2P29597 1187 aa10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 SERPINB6P35237 376 aa10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 SCNN1AP37088 669 aa10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 CLCN3P51790 818 aa10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 CHN2P52757 468 aa10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 DLG1Q12959 904 aa10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 ITGA9Q13797 1035 aa10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 PDK3Q15120 406 aa10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 AMHR2Q16671 573 aa10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 UGT2A3Q6UWM9 527 aa10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 HPS6Q86YV9 775 aa10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 IFNLR1Q8IU57 520 aaPredicted RBP10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 ICA1LQ8NDH6 482 aa10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 NAT14Q8WUY8 206 aa10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 TRAPPC12Q8WVT3 735 aa10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 CCDC124Q96CT7 223 aaKnown RBP10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 KLRG1Q96E93 195 aa10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 KCTD15Q96SI1 283 aaPredicted RBP10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 CDH19Q9H159 772 aa10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 PDZD7Q9H5P4 517 aa10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 CYP4F11Q9HBI6 524 aa10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 DPP3Q9NY33 737 aa10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 RCOR3Q9P2K3 495 aaPredicted RBP10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 SLC17A6Q9P2U8 582 aa10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 PRPF19Q9UMS4 504 aaKnown RBP10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 USP3Q9Y6I4 520 aa10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 GOLGB1Q14789 3259 aaKnown RBP10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 SCN4AP35499 1836 aa10.14□□□□□ -0.79
SMARCD1-205ENST00000548573 TMEM114B3SHH9 223 aa10.13□□□□□ -0.79
SMARCD1-205ENST00000548573 DENRO43583 198 aaKnown RBP10.13□□□□□ -0.79
SMARCD1-205ENST00000548573 DCXO43602 365 aa10.13□□□□□ -0.79
SMARCD1-205ENST00000548573 STK10O94804 968 aaKnown RBP10.13□□□□□ -0.79
SMARCD1-205ENST00000548573 POLBP06746 335 aa10.13□□□□□ -0.79
SMARCD1-205ENST00000548573 CYP2C8P10632 490 aa10.13□□□□□ -0.79
SMARCD1-205ENST00000548573 NUMBP49757 651 aa10.13□□□□□ -0.79
SMARCD1-205ENST00000548573 SESN2P58004 480 aaPredicted RBP10.13□□□□□ -0.79
SMARCD1-205ENST00000548573 CRADDP78560 199 aa10.13□□□□□ -0.79
SMARCD1-205ENST00000548573 KLF10Q13118 480 aa10.13□□□□□ -0.79
SMARCD1-205ENST00000548573 LAMB3Q13751 1172 aa10.13□□□□□ -0.79
SMARCD1-205ENST00000548573 SPANXN3Q5MJ09 141 aa10.13□□□□□ -0.79
SMARCD1-205ENST00000548573 NOL9Q5SY16 702 aaKnown RBP10.13□□□□□ -0.79
SMARCD1-205ENST00000548573 VWA5B1Q5TIE3 1220 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms