RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 EPN3Q9H201 632 aa14.7□□□□□ -0.06
PTCH1-217ENST00000548420 SNX25Q9H3E2 840 aa14.7□□□□□ -0.06
PTCH1-217ENST00000548420 LMBRD1Q9NUN5 540 aa14.7□□□□□ -0.06
PTCH1-217ENST00000548420 PTPN1P18031 435 aaKnown RBP14.69□□□□□ -0.06
PTCH1-217ENST00000548420 OXTRP30559 389 aa14.69□□□□□ -0.06
PTCH1-217ENST00000548420 RPL10AP62906 217 aaKnown RBP14.69□□□□□ -0.06
PTCH1-217ENST00000548420 KRT39Q6A163 491 aa14.69□□□□□ -0.06
PTCH1-217ENST00000548420 VSTM1Q6UX27 236 aa14.69□□□□□ -0.06
PTCH1-217ENST00000548420 C4orf50Q6ZRC1 276 aa14.69□□□□□ -0.06
PTCH1-217ENST00000548420 TMPRSS6Q8IU80 811 aa14.69□□□□□ -0.06
PTCH1-217ENST00000548420 LSMEM2Q8N112 164 aa14.69□□□□□ -0.06
PTCH1-217ENST00000548420 OR6B3Q8NGW1 331 aa14.69□□□□□ -0.06
PTCH1-217ENST00000548420 ELMO3Q96BJ8 720 aa14.69□□□□□ -0.06
PTCH1-217ENST00000548420 FAXDC2Q96IV6 333 aa14.69□□□□□ -0.06
PTCH1-217ENST00000548420 CEP295NLQ96MC4 621 aa14.69□□□□□ -0.06
PTCH1-217ENST00000548420 CEP63Q96MT8 703 aa14.69□□□□□ -0.06
PTCH1-217ENST00000548420 ELF4Q99607 663 aaPredicted RBP14.69□□□□□ -0.06
PTCH1-217ENST00000548420 NUP58Q9BVL2 599 aa14.69□□□□□ -0.06
PTCH1-217ENST00000548420 ZNF768Q9H5H4 540 aaKnown RBP14.69□□□□□ -0.06
PTCH1-217ENST00000548420 SMYD3Q9H7B4 428 aa14.69□□□□□ -0.06
PTCH1-217ENST00000548420 APOBEC3GQ9HC16 384 aaKnown RBP14.69□□□□□ -0.06
PTCH1-217ENST00000548420 ADAMTS1Q9UHI8 967 aa14.69□□□□□ -0.06
PTCH1-217ENST00000548420 COQ4Q9Y3A0 265 aa14.69□□□□□ -0.06
PTCH1-217ENST00000548420 PLXNA2O75051 1894 aa14.69□□□□□ -0.06
PTCH1-217ENST00000548420 OTOGQ6ZRI0 2925 aa14.69□□□□□ -0.06
PTCH1-217ENST00000548420 F8P00451 2351 aa14.68□□□□□ -0.06
PTCH1-217ENST00000548420 BIN1O00499 593 aa14.68□□□□□ -0.06
PTCH1-217ENST00000548420 USP12O75317 370 aa14.68□□□□□ -0.06
PTCH1-217ENST00000548420 ITGAVP06756 1048 aa14.68□□□□□ -0.06
PTCH1-217ENST00000548420 P4HA1P13674 534 aa14.68□□□□□ -0.06
PTCH1-217ENST00000548420 CKMT2P17540 419 aa14.68□□□□□ -0.06
PTCH1-217ENST00000548420 ACSL1P33121 698 aa14.68□□□□□ -0.06
PTCH1-217ENST00000548420 PSMC1P62191 440 aaKnown RBP14.68□□□□□ -0.06
PTCH1-217ENST00000548420 BNIP3Q12983 259 aa14.68□□□□□ -0.06
PTCH1-217ENST00000548420 CAMK4Q16566 473 aa14.68□□□□□ -0.06
PTCH1-217ENST00000548420 SKIDA1Q1XH10 827 aa14.68□□□□□ -0.06
PTCH1-217ENST00000548420 CDCP2Q5VXM1 449 aa14.68□□□□□ -0.06
PTCH1-217ENST00000548420 CACUL1Q86Y37 369 aa14.68□□□□□ -0.06
PTCH1-217ENST00000548420 SPATA2LQ8IUW3 424 aaPredicted RBP14.68□□□□□ -0.06
PTCH1-217ENST00000548420 CRYBG2Q8N1P7 616 aa14.68□□□□□ -0.06
PTCH1-217ENST00000548420 NELFBQ8WX92 580 aa14.68□□□□□ -0.06
PTCH1-217ENST00000548420 SEMA4DQ92854 862 aa14.68□□□□□ -0.06
PTCH1-217ENST00000548420 BIRC7Q96CA5 298 aa14.68□□□□□ -0.06
PTCH1-217ENST00000548420 PCED1BQ96HM7 432 aa14.68□□□□□ -0.06
PTCH1-217ENST00000548420 PHF12Q96QT6 1004 aa14.68□□□□□ -0.06
PTCH1-217ENST00000548420 DPEP3Q9H4B8 488 aa14.68□□□□□ -0.06
PTCH1-217ENST00000548420 CLSTN2Q9H4D0 955 aa14.68□□□□□ -0.06
PTCH1-217ENST00000548420 POLR1BQ9H9Y6 1135 aa14.68□□□□□ -0.06
PTCH1-217ENST00000548420 MAGEC2Q9UBF1 373 aaPredicted RBP14.68□□□□□ -0.06
PTCH1-217ENST00000548420 STON1Q9Y6Q2 735 aa14.68□□□□□ -0.06
PTCH1-217ENST00000548420 NF1P21359 2839 aa14.67□□□□□ -0.06
PTCH1-217ENST00000548420 BICDL2A1A5D9 508 aa14.67□□□□□ -0.06
PTCH1-217ENST00000548420 ZNF840PA6NDX5 716 aa14.67□□□□□ -0.06
PTCH1-217ENST00000548420 A8MXQ7 604 aa14.67□□□□□ -0.06
PTCH1-217ENST00000548420 GFRA2O00451 464 aa14.67□□□□□ -0.06
PTCH1-217ENST00000548420 PMM2O15305 246 aa14.67□□□□□ -0.06
PTCH1-217ENST00000548420 STX10O60499 249 aa14.67□□□□□ -0.06
PTCH1-217ENST00000548420 WNT1P04628 370 aa14.67□□□□□ -0.06
PTCH1-217ENST00000548420 PIK3CAP42336 1068 aa14.67□□□□□ -0.06
PTCH1-217ENST00000548420 ASPAP45381 313 aa14.67□□□□□ -0.06
PTCH1-217ENST00000548420 COPAP53621 1224 aa14.67□□□□□ -0.06
PTCH1-217ENST00000548420 CLN3Q13286 438 aa14.67□□□□□ -0.06
PTCH1-217ENST00000548420 BTBD8Q5XKL5 378 aa14.67□□□□□ -0.06
PTCH1-217ENST00000548420 GRAMD4Q6IC98 578 aa14.67□□□□□ -0.06
PTCH1-217ENST00000548420 SPOPLQ6IQ16 392 aa14.67□□□□□ -0.06
PTCH1-217ENST00000548420 XKR5Q6UX68 686 aa14.67□□□□□ -0.06
PTCH1-217ENST00000548420 UNC93AQ86WB7 457 aa14.67□□□□□ -0.06
PTCH1-217ENST00000548420 B3GALNT2Q8NCR0 500 aa14.67□□□□□ -0.06
PTCH1-217ENST00000548420 SLC35C1Q96A29 364 aa14.67□□□□□ -0.06
PTCH1-217ENST00000548420 MYLPFQ96A32 169 aa14.67□□□□□ -0.06
PTCH1-217ENST00000548420 SIPA1Q96FS4 1042 aa14.67□□□□□ -0.06
PTCH1-217ENST00000548420 SPATA17Q96L03 361 aa14.67□□□□□ -0.06
PTCH1-217ENST00000548420 B3GNT5Q9BYG0 378 aa14.67□□□□□ -0.06
PTCH1-217ENST00000548420 CYP3A43Q9HB55 503 aa14.67□□□□□ -0.06
PTCH1-217ENST00000548420 METTL14Q9HCE5 456 aaKnown RBP14.67□□□□□ -0.06
PTCH1-217ENST00000548420 ARMCX3Q9UH62 379 aaPredicted RBP14.67□□□□□ -0.06
PTCH1-217ENST00000548420 MYH10P35580 1976 aa14.67□□□□□ -0.06
PTCH1-217ENST00000548420 CKAP5Q14008 2032 aa14.66□□□□□ -0.06
PTCH1-217ENST00000548420 KIF26BQ2KJY2 2108 aa14.66□□□□□ -0.06
PTCH1-217ENST00000548420 MED13Q9UHV7 2174 aa14.66□□□□□ -0.06
PTCH1-217ENST00000548420 DFNA5O60443 496 aa14.66□□□□□ -0.06
PTCH1-217ENST00000548420 TSPAN3O60637 253 aa14.66□□□□□ -0.06
PTCH1-217ENST00000548420 OAS1P00973 400 aaKnown RBP14.66□□□□□ -0.06
PTCH1-217ENST00000548420 PFKLP17858 780 aa14.66□□□□□ -0.06
PTCH1-217ENST00000548420 BDNFP23560 247 aa14.66□□□□□ -0.06
PTCH1-217ENST00000548420 ACP1P24666 158 aa14.66□□□□□ -0.06
PTCH1-217ENST00000548420 MXI1P50539 228 aa14.66□□□□□ -0.06
PTCH1-217ENST00000548420 MARSP56192 900 aaKnown RBP14.66□□□□□ -0.06
PTCH1-217ENST00000548420 NOP14P78316 857 aaKnown RBP14.66□□□□□ -0.06
PTCH1-217ENST00000548420 INCA1Q0VD86 236 aa14.66□□□□□ -0.06
PTCH1-217ENST00000548420 SRSF6Q13247 344 aaKnown RBP14.66□□□□□ -0.06
PTCH1-217ENST00000548420 ORC1Q13415 861 aa14.66□□□□□ -0.06
PTCH1-217ENST00000548420 ANO4Q32M45 955 aa14.66□□□□□ -0.06
PTCH1-217ENST00000548420 CBWD6Q4V339 395 aa14.66□□□□□ -0.06
PTCH1-217ENST00000548420 MDH1BQ5I0G3 518 aa14.66□□□□□ -0.06
PTCH1-217ENST00000548420 CBWD3Q5JTY5 395 aa14.66□□□□□ -0.06
PTCH1-217ENST00000548420 CBWD5Q5RIA9 395 aa14.66□□□□□ -0.06
PTCH1-217ENST00000548420 KLHL10Q6JEL2 608 aa14.66□□□□□ -0.06
PTCH1-217ENST00000548420 PAQR9Q6ZVX9 377 aa14.66□□□□□ -0.06
PTCH1-217ENST00000548420 KANSL1Q7Z3B3 1105 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms