RNA–Protein interactions for RNA: ENST00000547765.5

TUBA1B-204, Transcript of tubulin alpha 1b, humanhuman

TSL 5

Gene TUBA1B, Length 1,875 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-204ENST00000547765 HIC1Q14526 733 aa13.64□□□□□ -0.23
TUBA1B-204ENST00000547765 PAFAH1B3Q15102 231 aaKnown RBP13.64□□□□□ -0.23
TUBA1B-204ENST00000547765 ZNF792Q3KQV3 632 aa13.64□□□□□ -0.23
TUBA1B-204ENST00000547765 FBXO47Q5MNV8 452 aa13.64□□□□□ -0.23
TUBA1B-204ENST00000547765 C1orf146Q5VVC0 180 aa13.64□□□□□ -0.23
TUBA1B-204ENST00000547765 MAMDC4Q6UXC1 1216 aa13.64□□□□□ -0.23
TUBA1B-204ENST00000547765 ALKAL1Q6UXT8 129 aa13.64□□□□□ -0.23
TUBA1B-204ENST00000547765 CATSPER4Q7RTX7 472 aa13.64□□□□□ -0.23
TUBA1B-204ENST00000547765 ZNF467Q7Z7K2 595 aaPredicted RBP13.64□□□□□ -0.23
TUBA1B-204ENST00000547765 RASSF3Q86WH2 238 aa13.64□□□□□ -0.23
TUBA1B-204ENST00000547765 ARNTL2Q8WYA1 636 aa13.64□□□□□ -0.23
TUBA1B-204ENST00000547765 ISL2Q96A47 359 aa13.64□□□□□ -0.23
TUBA1B-204ENST00000547765 P2RY11Q96G91 374 aa13.64□□□□□ -0.23
TUBA1B-204ENST00000547765 CCDC28BQ9BUN5 200 aa13.64□□□□□ -0.23
TUBA1B-204ENST00000547765 NDE1Q9NXR1 346 aa13.64□□□□□ -0.23
TUBA1B-204ENST00000547765 TUBGCP4Q9UGJ1 667 aa13.64□□□□□ -0.23
TUBA1B-204ENST00000547765 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.64□□□□□ -0.23
TUBA1B-204ENST00000547765 PIRO00625 290 aa13.63□□□□□ -0.23
TUBA1B-204ENST00000547765 PPEF2O14830 753 aa13.63□□□□□ -0.23
TUBA1B-204ENST00000547765 CCNT2O60583 730 aaKnown RBP13.63□□□□□ -0.23
TUBA1B-204ENST00000547765 H2AFYO75367 372 aaKnown RBP13.63□□□□□ -0.23
TUBA1B-204ENST00000547765 SKAP2O75563 359 aaPredicted RBP13.63□□□□□ -0.23
TUBA1B-204ENST00000547765 ZNF286BP0CG31 522 aa13.63□□□□□ -0.23
TUBA1B-204ENST00000547765 HOXD8P13378 290 aaPredicted RBP13.63□□□□□ -0.23
TUBA1B-204ENST00000547765 CCDC130P13994 396 aa13.63□□□□□ -0.23
TUBA1B-204ENST00000547765 CALRP27797 417 aaKnown RBP13.63□□□□□ -0.23
TUBA1B-204ENST00000547765 HOXA11P31270 313 aaPredicted RBP13.63□□□□□ -0.23
TUBA1B-204ENST00000547765 NOS2P35228 1153 aa13.63□□□□□ -0.23
TUBA1B-204ENST00000547765 SPRP35270 261 aaPredicted RBP13.63□□□□□ -0.23
TUBA1B-204ENST00000547765 HARS2P49590 506 aaKnown RBP13.63□□□□□ -0.23
TUBA1B-204ENST00000547765 ATXN1P54253 815 aaKnown RBP13.63□□□□□ -0.23
TUBA1B-204ENST00000547765 AIF1P55008 147 aa13.63□□□□□ -0.23
TUBA1B-204ENST00000547765 SESN2P58004 480 aaPredicted RBP13.63□□□□□ -0.23
TUBA1B-204ENST00000547765 RPL10AP62906 217 aaKnown RBP13.63□□□□□ -0.23
TUBA1B-204ENST00000547765 ZCCHC23Q6ZST2 131 aa13.63□□□□□ -0.23
TUBA1B-204ENST00000547765 LIMS2Q7Z4I7 341 aa13.63□□□□□ -0.23
TUBA1B-204ENST00000547765 CLEC4CQ8WTT0 213 aa13.63□□□□□ -0.23
TUBA1B-204ENST00000547765 RNF139Q8WU17 664 aa13.63□□□□□ -0.23
TUBA1B-204ENST00000547765 LRRN4Q8WUT4 740 aa13.63□□□□□ -0.23
TUBA1B-204ENST00000547765 CMTM5Q96DZ9 223 aa13.63□□□□□ -0.23
TUBA1B-204ENST00000547765 PANX3Q96QZ0 392 aa13.63□□□□□ -0.23
TUBA1B-204ENST00000547765 TRIM56Q9BRZ2 755 aaKnown RBP13.63□□□□□ -0.23
TUBA1B-204ENST00000547765 APOL6Q9BWW8 343 aa13.63□□□□□ -0.23
TUBA1B-204ENST00000547765 BRD8Q9H0E9 1235 aa13.63□□□□□ -0.23
TUBA1B-204ENST00000547765 ADAMTS10Q9H324 1103 aa13.63□□□□□ -0.23
TUBA1B-204ENST00000547765 DPEP3Q9H4B8 488 aa13.63□□□□□ -0.23
TUBA1B-204ENST00000547765 LRRC40Q9H9A6 602 aa13.63□□□□□ -0.23
TUBA1B-204ENST00000547765 SLC7A8Q9UHI5 535 aa13.63□□□□□ -0.23
TUBA1B-204ENST00000547765 STAP1Q9ULZ2 295 aa13.63□□□□□ -0.23
TUBA1B-204ENST00000547765 CITO14578 2027 aa13.63□□□□□ -0.23
TUBA1B-204ENST00000547765 MFSD11O43934 449 aa13.63□□□□□ -0.23
TUBA1B-204ENST00000547765 MPOP05164 745 aa13.63□□□□□ -0.23
TUBA1B-204ENST00000547765 SP100P23497 879 aaPredicted RBP13.63□□□□□ -0.23
TUBA1B-204ENST00000547765 TYK2P29597 1187 aa13.63□□□□□ -0.23
TUBA1B-204ENST00000547765 CPOXP36551 454 aa13.63□□□□□ -0.23
TUBA1B-204ENST00000547765 MAGEA12P43365 314 aa13.63□□□□□ -0.23
TUBA1B-204ENST00000547765 COPAP53621 1224 aa13.63□□□□□ -0.23
TUBA1B-204ENST00000547765 ABCE1P61221 599 aaKnown RBP13.63□□□□□ -0.23
TUBA1B-204ENST00000547765 DEUP1Q05D60 604 aa13.63□□□□□ -0.23
TUBA1B-204ENST00000547765 PCLAFQ15004 111 aa13.63□□□□□ -0.23
TUBA1B-204ENST00000547765 FSCBQ5H9T9 825 aa13.63□□□□□ -0.23
TUBA1B-204ENST00000547765 MARCH8Q5T0T0 291 aa13.63□□□□□ -0.23
TUBA1B-204ENST00000547765 C16orf46Q6P387 395 aa13.63□□□□□ -0.23
TUBA1B-204ENST00000547765 DEFB106AQ8N104 65 aa13.63□□□□□ -0.23
TUBA1B-204ENST00000547765 KBTBD7Q8WVZ9 684 aa13.63□□□□□ -0.23
TUBA1B-204ENST00000547765 JADE3Q92613 823 aa13.63□□□□□ -0.23
TUBA1B-204ENST00000547765 NT5C3BQ969T7 300 aa13.63□□□□□ -0.23
TUBA1B-204ENST00000547765 SLC9A7Q96T83 725 aa13.63□□□□□ -0.23
TUBA1B-204ENST00000547765 LGMNQ99538 433 aa13.63□□□□□ -0.23
TUBA1B-204ENST00000547765 SYT15Q9BQS2 421 aa13.63□□□□□ -0.23
TUBA1B-204ENST00000547765 EBF4Q9BQW3 602 aa13.63□□□□□ -0.23
TUBA1B-204ENST00000547765 VCX3BQ9H321 246 aa13.63□□□□□ -0.23
TUBA1B-204ENST00000547765 KRT82Q9NSB4 513 aa13.63□□□□□ -0.23
TUBA1B-204ENST00000547765 PDP2Q9P2J9 529 aa13.63□□□□□ -0.23
TUBA1B-204ENST00000547765 COPG2Q9UBF2 871 aa13.63□□□□□ -0.23
TUBA1B-204ENST00000547765 MID2Q9UJV3 735 aa13.63□□□□□ -0.23
TUBA1B-204ENST00000547765 CDY2AQ9Y6F7 541 aa13.63□□□□□ -0.23
TUBA1B-204ENST00000547765 CDY1Q9Y6F8 540 aa13.63□□□□□ -0.23
TUBA1B-204ENST00000547765 RALGAPA2Q2PPJ7 1873 aa13.63□□□□□ -0.23
TUBA1B-204ENST00000547765 OTOFQ9HC10 1997 aa13.62□□□□□ -0.23
TUBA1B-204ENST00000547765 ERI2A8K979 691 aaKnown RBP13.62□□□□□ -0.23
TUBA1B-204ENST00000547765 KPNA7A9QM74 516 aa13.62□□□□□ -0.23
TUBA1B-204ENST00000547765 TMEM114B3SHH9 223 aa13.62□□□□□ -0.23
TUBA1B-204ENST00000547765 ADM5C9JUS6 153 aa13.62□□□□□ -0.23
TUBA1B-204ENST00000547765 NCAM2O15394 837 aa13.62□□□□□ -0.23
TUBA1B-204ENST00000547765 MTSS1O43312 755 aa13.62□□□□□ -0.23
TUBA1B-204ENST00000547765 ITM2AO43736 263 aa13.62□□□□□ -0.23
TUBA1B-204ENST00000547765 PDGFRBP09619 1106 aa13.62□□□□□ -0.23
TUBA1B-204ENST00000547765 C6orf222P0C671 652 aaPredicted RBP13.62□□□□□ -0.23
TUBA1B-204ENST00000547765 RALBP11234 206 aa13.62□□□□□ -0.23
TUBA1B-204ENST00000547765 CPA3P15088 417 aa13.62□□□□□ -0.23
TUBA1B-204ENST00000547765 YBX3P16989 372 aaKnown RBP eCLIP13.62□□□□□ -0.234e-15■■■□□ 16.6
TUBA1B-204ENST00000547765 SERPINB8P50452 374 aa13.62□□□□□ -0.23
TUBA1B-204ENST00000547765 IRX4P78413 519 aa13.62□□□□□ -0.23
TUBA1B-204ENST00000547765 DSG1Q02413 1049 aa13.62□□□□□ -0.23
TUBA1B-204ENST00000547765 UBAP2LQ14157 1087 aaKnown RBP13.62□□□□□ -0.23
TUBA1B-204ENST00000547765 SV2CQ496J9 727 aa13.62□□□□□ -0.23
TUBA1B-204ENST00000547765 MDH1BQ5I0G3 518 aa13.62□□□□□ -0.23
TUBA1B-204ENST00000547765 METTL21CQ5VZV1 264 aa13.62□□□□□ -0.23
TUBA1B-204ENST00000547765 BNIPLQ7Z465 357 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms