RNA–Protein interactions for RNA: ENST00000546820.5

PTCH1-213, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 864 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-213ENST00000546820 RPRD1AQ96P16 312 aaPredicted RBP14.23□□□□□ -0.13
PTCH1-213ENST00000546820 PRMT1Q99873 361 aaKnown RBP14.23□□□□□ -0.13
PTCH1-213ENST00000546820 C1QTNF1Q9BXJ1 281 aa14.23□□□□□ -0.13
PTCH1-213ENST00000546820 OSGEPQ9NPF4 335 aa14.23□□□□□ -0.13
PTCH1-213ENST00000546820 DNAJC17Q9NVM6 304 aaKnown RBP14.23□□□□□ -0.13
PTCH1-213ENST00000546820 PLK2Q9NYY3 685 aa14.23□□□□□ -0.13
PTCH1-213ENST00000546820 STIM2Q9P246 746 aa14.23□□□□□ -0.13
PTCH1-213ENST00000546820 OR12D3Q9UGF7 316 aa14.23□□□□□ -0.13
PTCH1-213ENST00000546820 PCSK1NQ9UHG2 260 aa14.23□□□□□ -0.13
PTCH1-213ENST00000546820 FZD10Q9ULW2 581 aa14.23□□□□□ -0.13
PTCH1-213ENST00000546820 USP18Q9UMW8 372 aa14.23□□□□□ -0.13
PTCH1-213ENST00000546820 NDRG2Q9UN36 371 aaKnown RBP14.23□□□□□ -0.13
PTCH1-213ENST00000546820 SIT1Q9Y3P8 196 aa14.23□□□□□ -0.13
PTCH1-213ENST00000546820 TBC1D3BA6NDS4 549 aa14.22□□□□□ -0.13
PTCH1-213ENST00000546820 H0Y626 953 aa14.22□□□□□ -0.13
PTCH1-213ENST00000546820 SRGAP2O75044 1071 aa14.22□□□□□ -0.13
PTCH1-213ENST00000546820 TULP3O75386 442 aa14.22□□□□□ -0.13
PTCH1-213ENST00000546820 LRCH4O75427 683 aa14.22□□□□□ -0.13
PTCH1-213ENST00000546820 PROSCO94903 275 aa14.22□□□□□ -0.13
PTCH1-213ENST00000546820 MIPP30301 263 aa14.22□□□□□ -0.13
PTCH1-213ENST00000546820 MAN1A1P33908 653 aa14.22□□□□□ -0.13
PTCH1-213ENST00000546820 OPRD1P41143 372 aa14.22□□□□□ -0.13
PTCH1-213ENST00000546820 SLC6A11P48066 632 aa14.22□□□□□ -0.13
PTCH1-213ENST00000546820 DGKGP49619 791 aa14.22□□□□□ -0.13
PTCH1-213ENST00000546820 HADHBP55084 474 aaKnown RBP14.22□□□□□ -0.13
PTCH1-213ENST00000546820 OXCT1P55809 520 aa14.22□□□□□ -0.13
PTCH1-213ENST00000546820 NRG1Q02297 640 aaPredicted RBP14.22□□□□□ -0.13
PTCH1-213ENST00000546820 ZNF252P-AS1Q0IIN9 211 aa14.22□□□□□ -0.13
PTCH1-213ENST00000546820 SCAPQ12770 1279 aa14.22□□□□□ -0.13
PTCH1-213ENST00000546820 LRRC32Q14392 662 aa14.22□□□□□ -0.13
PTCH1-213ENST00000546820 E2F5Q15329 346 aa14.22□□□□□ -0.13
PTCH1-213ENST00000546820 IFI16Q16666 785 aaKnown RBP14.22□□□□□ -0.13
PTCH1-213ENST00000546820 FBXO43Q4G163 708 aa14.22□□□□□ -0.13
PTCH1-213ENST00000546820 RAB6CQ53S08 254 aa14.22□□□□□ -0.13
PTCH1-213ENST00000546820 TMEM196Q5HYL7 178 aa14.22□□□□□ -0.13
PTCH1-213ENST00000546820 DGKKQ5KSL6 1271 aa14.22□□□□□ -0.13
PTCH1-213ENST00000546820 GRAMD4Q6IC98 578 aa14.22□□□□□ -0.13
PTCH1-213ENST00000546820 ETFBKMTQ8IXQ9 262 aa14.22□□□□□ -0.13
PTCH1-213ENST00000546820 CFAP52Q8N1V2 620 aa14.22□□□□□ -0.13
PTCH1-213ENST00000546820 CHFRQ96EP1 664 aa14.22□□□□□ -0.13
PTCH1-213ENST00000546820 BTBD6Q96KE9 485 aa14.22□□□□□ -0.13
PTCH1-213ENST00000546820 PPP1R9BQ96SB3 815 aa14.22□□□□□ -0.13
PTCH1-213ENST00000546820 RAB6CQ9H0N0 254 aa14.22□□□□□ -0.13
PTCH1-213ENST00000546820 RETREG1Q9H6L5 497 aa14.22□□□□□ -0.13
PTCH1-213ENST00000546820 LTB4R2Q9NPC1 389 aa14.22□□□□□ -0.13
PTCH1-213ENST00000546820 ARHGEF4Q9NR80 690 aa14.22□□□□□ -0.13
PTCH1-213ENST00000546820 FBXO10Q9UK96 956 aa14.22□□□□□ -0.13
PTCH1-213ENST00000546820 VANGL2Q9ULK5 521 aa14.22□□□□□ -0.13
PTCH1-213ENST00000546820 BDP1A6H8Y1 2624 aa14.22□□□□□ -0.13
PTCH1-213ENST00000546820 MYOFQ9NZM1 2061 aa14.21□□□□□ -0.13
PTCH1-213ENST00000546820 A0A0A0MRY4 1105 aa14.21□□□□□ -0.13
PTCH1-213ENST00000546820 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.21□□□□□ -0.13
PTCH1-213ENST00000546820 DRGXA6NNA5 263 aa14.21□□□□□ -0.13
PTCH1-213ENST00000546820 TMEM110-MUSTN1A8MSY1 372 aa14.21□□□□□ -0.13
PTCH1-213ENST00000546820 BTNL10A8MVZ5 291 aa14.21□□□□□ -0.13
PTCH1-213ENST00000546820 E9PAM4 449 aa14.21□□□□□ -0.13
PTCH1-213ENST00000546820 PJA2O43164 708 aa14.21□□□□□ -0.13
PTCH1-213ENST00000546820 GPR37L1O60883 481 aa14.21□□□□□ -0.13
PTCH1-213ENST00000546820 CLDN11O75508 207 aa14.21□□□□□ -0.13
PTCH1-213ENST00000546820 HOXD9P28356 352 aaPredicted RBP14.21□□□□□ -0.13
PTCH1-213ENST00000546820 L1CAMP32004 1257 aa14.21□□□□□ -0.13
PTCH1-213ENST00000546820 SLC1A1P43005 524 aa14.21□□□□□ -0.13
PTCH1-213ENST00000546820 TNFRSF4P43489 277 aa14.21□□□□□ -0.13
PTCH1-213ENST00000546820 CLCN5P51795 746 aa14.21□□□□□ -0.13
PTCH1-213ENST00000546820 ZNF135P52742 658 aaPredicted RBP14.21□□□□□ -0.13
PTCH1-213ENST00000546820 CDH4P55283 916 aa14.21□□□□□ -0.13
PTCH1-213ENST00000546820 RPS24P62847 133 aaKnown RBP14.21□□□□□ -0.13
PTCH1-213ENST00000546820 ZNF177Q13360 481 aaPredicted RBP14.21□□□□□ -0.13
PTCH1-213ENST00000546820 GAB4Q2WGN9 574 aa14.21□□□□□ -0.13
PTCH1-213ENST00000546820 C5orf22Q49AR2 442 aa14.21□□□□□ -0.13
PTCH1-213ENST00000546820 TXNDC11Q6PKC3 985 aa14.21□□□□□ -0.13
PTCH1-213ENST00000546820 MFN1Q8IWA4 741 aa14.21□□□□□ -0.13
PTCH1-213ENST00000546820 SYNPOQ8N3V7 929 aa14.21□□□□□ -0.13
PTCH1-213ENST00000546820 CARNMT1Q8N4J0 409 aa14.21□□□□□ -0.13
PTCH1-213ENST00000546820 ARFGAP1Q8N6T3 406 aa14.21□□□□□ -0.13
PTCH1-213ENST00000546820 CCDC185Q8N715 623 aa14.21□□□□□ -0.13
PTCH1-213ENST00000546820 ACRBPQ8NEB7 543 aa14.21□□□□□ -0.13
PTCH1-213ENST00000546820 FIBINQ8TAL6 211 aa14.21□□□□□ -0.13
PTCH1-213ENST00000546820 PDLIM2Q96JY6 352 aa14.21□□□□□ -0.13
PTCH1-213ENST00000546820 EPAS1Q99814 870 aa14.21□□□□□ -0.13
PTCH1-213ENST00000546820 LMAN1LQ9HAT1 526 aa14.21□□□□□ -0.13
PTCH1-213ENST00000546820 ANLNQ9NQW6 1124 aa14.21□□□□□ -0.13
PTCH1-213ENST00000546820 TMPRSS4Q9NRS4 437 aa14.21□□□□□ -0.13
PTCH1-213ENST00000546820 DONSONQ9NYP3 566 aa14.21□□□□□ -0.13
PTCH1-213ENST00000546820 KIAA1522Q9P206 1035 aaPredicted RBP14.21□□□□□ -0.13
PTCH1-213ENST00000546820 PPARGC1AQ9UBK2 798 aaKnown RBP14.21□□□□□ -0.13
PTCH1-213ENST00000546820 AP4E1Q9UPM8 1137 aa14.21□□□□□ -0.13
PTCH1-213ENST00000546820 SLC27A6Q9Y2P4 619 aa14.21□□□□□ -0.13
PTCH1-213ENST00000546820 A0A0C4DFX4 3053 aa14.21□□□□□ -0.13
PTCH1-213ENST00000546820 TTC28Q96AY4 2481 aa14.21□□□□□ -0.13
PTCH1-213ENST00000546820 A0A1B0GVM2 712 aa14.2□□□□□ -0.14
PTCH1-213ENST00000546820 TCAF2A6NFQ2 919 aa14.2□□□□□ -0.14
PTCH1-213ENST00000546820 TIMM44O43615 452 aa14.2□□□□□ -0.14
PTCH1-213ENST00000546820 KAT7O95251 611 aa14.2□□□□□ -0.14
PTCH1-213ENST00000546820 CCDC175P0C221 793 aa14.2□□□□□ -0.14
PTCH1-213ENST00000546820 CISD3P0C7P0 127 aa14.2□□□□□ -0.14
PTCH1-213ENST00000546820 HTR7P34969 479 aa14.2□□□□□ -0.14
PTCH1-213ENST00000546820 MAGEA9P43362 315 aa14.2□□□□□ -0.14
PTCH1-213ENST00000546820 CCDC173Q0VFZ6 552 aa14.2□□□□□ -0.14
PTCH1-213ENST00000546820 SLC12A1Q13621 1099 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms