RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 CARNMT1Q8N4J0 409 aa17.4■□□□□ 0.38
LTBR-215ENST00000546296 TERB1Q8NA31 727 aa17.4■□□□□ 0.38
LTBR-215ENST00000546296 MYEOVQ96EZ4 313 aa17.4■□□□□ 0.38
LTBR-215ENST00000546296 PRICKLE1Q96MT3 831 aaPredicted RBP17.4■□□□□ 0.38
LTBR-215ENST00000546296 RPRD1AQ96P16 312 aaPredicted RBP17.4■□□□□ 0.38
LTBR-215ENST00000546296 PANX2Q96RD6 677 aa17.4■□□□□ 0.38
LTBR-215ENST00000546296 HAPLN3Q96S86 360 aa17.4■□□□□ 0.38
LTBR-215ENST00000546296 PRMT1Q99873 361 aaKnown RBP17.4■□□□□ 0.38
LTBR-215ENST00000546296 IER2Q9BTL4 223 aa17.4■□□□□ 0.38
LTBR-215ENST00000546296 RAB6CQ9H0N0 254 aa17.4■□□□□ 0.38
LTBR-215ENST00000546296 SPTLC3Q9NUV7 552 aa17.4■□□□□ 0.38
LTBR-215ENST00000546296 FBXO10Q9UK96 956 aa17.4■□□□□ 0.38
LTBR-215ENST00000546296 A0A0A0MRY4 1105 aa17.39■□□□□ 0.37
LTBR-215ENST00000546296 LAMTOR5O43504 91 aa17.39■□□□□ 0.37
LTBR-215ENST00000546296 GALR2O43603 387 aaPredicted RBP17.39■□□□□ 0.37
LTBR-215ENST00000546296 ADRA1BP35368 520 aa17.39■□□□□ 0.37
LTBR-215ENST00000546296 GGCXP38435 758 aa17.39■□□□□ 0.37
LTBR-215ENST00000546296 HDAC4P56524 1084 aa17.39■□□□□ 0.37
LTBR-215ENST00000546296 OGDHQ02218 1023 aa17.39■□□□□ 0.37
LTBR-215ENST00000546296 ACBD5Q5T8D3 534 aaPredicted RBP17.39■□□□□ 0.37
LTBR-215ENST00000546296 FBXL22Q6P050 247 aa17.39■□□□□ 0.37
LTBR-215ENST00000546296 LRRC31Q6UY01 552 aa17.39■□□□□ 0.37
LTBR-215ENST00000546296 C1orf210Q8IVY1 113 aa17.39■□□□□ 0.37
LTBR-215ENST00000546296 MFN1Q8IWA4 741 aa17.39■□□□□ 0.37
LTBR-215ENST00000546296 SFTPA1Q8IWL2 248 aa17.39■□□□□ 0.37
LTBR-215ENST00000546296 SPEM1Q8N4L4 309 aa17.39■□□□□ 0.37
LTBR-215ENST00000546296 CTNNBL1Q8WYA6 563 aaPredicted RBP17.39■□□□□ 0.37
LTBR-215ENST00000546296 EZH1Q92800 747 aaPredicted RBP17.39■□□□□ 0.37
LTBR-215ENST00000546296 PRRX2Q99811 253 aa17.39■□□□□ 0.37
LTBR-215ENST00000546296 NUP85Q9BW27 656 aa17.39■□□□□ 0.37
LTBR-215ENST00000546296 ANLNQ9NQW6 1124 aa17.39■□□□□ 0.37
LTBR-215ENST00000546296 TMPRSS4Q9NRS4 437 aa17.39■□□□□ 0.37
LTBR-215ENST00000546296 IMPACTQ9P2X3 320 aa17.39■□□□□ 0.37
LTBR-215ENST00000546296 VANGL2Q9ULK5 521 aa17.39■□□□□ 0.37
LTBR-215ENST00000546296 CLEC4EQ9ULY5 219 aa17.39■□□□□ 0.37
LTBR-215ENST00000546296 HCN4Q9Y3Q4 1203 aa17.39■□□□□ 0.37
LTBR-215ENST00000546296 SNX10Q9Y5X0 201 aa17.39■□□□□ 0.37
LTBR-215ENST00000546296 ZDBF2Q9HCK1 2354 aa17.39■□□□□ 0.37
LTBR-215ENST00000546296 GOLGA6L3A6NEY3 463 aa17.38■□□□□ 0.37
LTBR-215ENST00000546296 H0Y626 953 aa17.38■□□□□ 0.37
LTBR-215ENST00000546296 SRGAP2O75044 1071 aa17.38■□□□□ 0.37
LTBR-215ENST00000546296 RNF8O76064 485 aa17.38■□□□□ 0.37
LTBR-215ENST00000546296 CYP1A2P05177 515 aa17.38■□□□□ 0.37
LTBR-215ENST00000546296 TIE1P35590 1138 aa17.38■□□□□ 0.37
LTBR-215ENST00000546296 CDH18Q13634 790 aa17.38■□□□□ 0.37
LTBR-215ENST00000546296 TTC39BQ5VTQ0 682 aaPredicted RBP17.38■□□□□ 0.37
LTBR-215ENST00000546296 ANKS1BQ7Z6G8 1248 aa17.38■□□□□ 0.37
LTBR-215ENST00000546296 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.38■□□□□ 0.37
LTBR-215ENST00000546296 C14orf80Q86SX3 495 aa17.38■□□□□ 0.37
LTBR-215ENST00000546296 ZNF557Q8N988 423 aaPredicted RBP17.38■□□□□ 0.37
LTBR-215ENST00000546296 RPLP0P6Q8NHW5 317 aa17.38■□□□□ 0.37
LTBR-215ENST00000546296 ARHGEF26Q96DR7 871 aa17.38■□□□□ 0.37
LTBR-215ENST00000546296 C1orf74Q96LT6 269 aa17.38■□□□□ 0.37
LTBR-215ENST00000546296 TRIM7Q9C029 511 aa17.38■□□□□ 0.37
LTBR-215ENST00000546296 NENFQ9UMX5 172 aa17.38■□□□□ 0.37
LTBR-215ENST00000546296 SLC27A6Q9Y2P4 619 aa17.38■□□□□ 0.37
LTBR-215ENST00000546296 I6L893 689 aaPredicted RBP17.37■□□□□ 0.37
LTBR-215ENST00000546296 CXCL12P48061 93 aa17.37■□□□□ 0.37
LTBR-215ENST00000546296 CCR3P51677 355 aa17.37■□□□□ 0.37
LTBR-215ENST00000546296 MRPS21P82921 87 aaKnown RBP17.37■□□□□ 0.37
LTBR-215ENST00000546296 GAS6Q14393 721 aa17.37■□□□□ 0.37
LTBR-215ENST00000546296 GEN1Q17RS7 908 aa17.37■□□□□ 0.37
LTBR-215ENST00000546296 EMC10Q5UCC4 262 aa17.37■□□□□ 0.37
LTBR-215ENST00000546296 SLFN11Q7Z7L1 901 aa17.37■□□□□ 0.37
LTBR-215ENST00000546296 CIR1Q86X95 450 aaPredicted RBP17.37■□□□□ 0.37
LTBR-215ENST00000546296 TMTC1Q8IUR5 882 aa17.37■□□□□ 0.37
LTBR-215ENST00000546296 CCDC170Q8IYT3 715 aa17.37■□□□□ 0.37
LTBR-215ENST00000546296 CCDC185Q8N715 623 aa17.37■□□□□ 0.37
LTBR-215ENST00000546296 FIBINQ8TAL6 211 aa17.37■□□□□ 0.37
LTBR-215ENST00000546296 USP33Q8TEY7 942 aa17.37■□□□□ 0.37
LTBR-215ENST00000546296 FNIP1Q8TF40 1166 aa17.37■□□□□ 0.37
LTBR-215ENST00000546296 IGSF8Q969P0 613 aa17.37■□□□□ 0.37
LTBR-215ENST00000546296 PACSIN1Q9BY11 444 aa17.37■□□□□ 0.37
LTBR-215ENST00000546296 ABCB8Q9NUT2 735 aa17.37■□□□□ 0.37
LTBR-215ENST00000546296 CTTNBP2NLQ9P2B4 639 aa17.37■□□□□ 0.37
LTBR-215ENST00000546296 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.36■□□□□ 0.37
LTBR-215ENST00000546296 PRRT4C9JH25 899 aa17.36■□□□□ 0.37
LTBR-215ENST00000546296 TIMM44O43615 452 aa17.36■□□□□ 0.37
LTBR-215ENST00000546296 LUC7L3O95232 432 aaKnown RBP17.36■□□□□ 0.37
LTBR-215ENST00000546296 TMEM253P0C7T8 217 aa17.36■□□□□ 0.37
LTBR-215ENST00000546296 CYLC1P35663 651 aaPredicted RBP17.36■□□□□ 0.37
LTBR-215ENST00000546296 CSTF1Q05048 431 aaKnown RBP17.36■□□□□ 0.37
LTBR-215ENST00000546296 ZNF177Q13360 481 aaPredicted RBP17.36■□□□□ 0.37
LTBR-215ENST00000546296 ANGPT1Q15389 498 aa17.36■□□□□ 0.37
LTBR-215ENST00000546296 SPA17Q15506 151 aa17.36■□□□□ 0.37
LTBR-215ENST00000546296 EFHC2Q5JST6 749 aa17.36■□□□□ 0.37
LTBR-215ENST00000546296 PKN3Q6P5Z2 889 aa17.36■□□□□ 0.37
LTBR-215ENST00000546296 CCDC33Q8N5R6 958 aa17.36■□□□□ 0.37
LTBR-215ENST00000546296 KCNV2Q8TDN2 545 aa17.36■□□□□ 0.37
LTBR-215ENST00000546296 WFIKKN2Q8TEU8 576 aa17.36■□□□□ 0.37
LTBR-215ENST00000546296 UCMAQ8WVF2 138 aa17.36■□□□□ 0.37
LTBR-215ENST00000546296 ACDQ96AP0 544 aa17.36■□□□□ 0.37
LTBR-215ENST00000546296 NCAPGQ9BPX3 1015 aa17.36■□□□□ 0.37
LTBR-215ENST00000546296 CIPCQ9C0C6 399 aa17.36■□□□□ 0.37
LTBR-215ENST00000546296 OSBPL2Q9H1P3 480 aa17.36■□□□□ 0.37
LTBR-215ENST00000546296 OR12D3Q9UGF7 316 aa17.36■□□□□ 0.37
LTBR-215ENST00000546296 PCSK1NQ9UHG2 260 aa17.36■□□□□ 0.37
LTBR-215ENST00000546296 IP6K2Q9UHH9 426 aa17.36■□□□□ 0.37
LTBR-215ENST00000546296 ANAPC7Q9UJX3 599 aa17.36■□□□□ 0.37
LTBR-215ENST00000546296 GGA2Q9UJY4 613 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms