RNA–Protein interactions for RNA: ENST00000545368.5

CDCA3-210, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 619 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-210ENST00000545368 PYROXD2Q8N2H3 581 aa13.43□□□□□ -0.26
CDCA3-210ENST00000545368 C17orf53Q8N3J3 647 aaPredicted RBP13.43□□□□□ -0.26
CDCA3-210ENST00000545368 SLC44A3Q8N4M1 653 aa13.43□□□□□ -0.26
CDCA3-210ENST00000545368 KCTD6Q8NC69 237 aa13.43□□□□□ -0.26
CDCA3-210ENST00000545368 HJURPQ8NCD3 748 aaPredicted RBP13.43□□□□□ -0.26
CDCA3-210ENST00000545368 CSGALNACT1Q8TDX6 532 aa13.43□□□□□ -0.26
CDCA3-210ENST00000545368 DDI1Q8WTU0 396 aa13.43□□□□□ -0.26
CDCA3-210ENST00000545368 TBC1D31Q96DN5 1066 aa13.43□□□□□ -0.26
CDCA3-210ENST00000545368 ASIC4Q96FT7 647 aa13.43□□□□□ -0.26
CDCA3-210ENST00000545368 KCTD15Q96SI1 283 aaPredicted RBP13.43□□□□□ -0.26
CDCA3-210ENST00000545368 PRMT1Q99873 361 aaKnown RBP13.43□□□□□ -0.26
CDCA3-210ENST00000545368 FAM83CQ9BQN1 747 aa13.43□□□□□ -0.26
CDCA3-210ENST00000545368 LINC00597Q9H2U6 94 aa13.43□□□□□ -0.26
CDCA3-210ENST00000545368 EBF3Q9H4W6 596 aa13.43□□□□□ -0.26
CDCA3-210ENST00000545368 VANGL2Q9ULK5 521 aa13.43□□□□□ -0.26
CDCA3-210ENST00000545368 SNX10Q9Y5X0 201 aa13.43□□□□□ -0.26
CDCA3-210ENST00000545368 TCF20Q9UGU0 1960 aaKnown RBP13.42□□□□□ -0.26
CDCA3-210ENST00000545368 LRRD1A4D1F6 860 aa13.42□□□□□ -0.26
CDCA3-210ENST00000545368 C19orf67A6NJJ6 358 aa13.42□□□□□ -0.26
CDCA3-210ENST00000545368 NEDD8-MDP1E9PL57 170 aa13.42□□□□□ -0.26
CDCA3-210ENST00000545368 H3BRJ5 948 aa13.42□□□□□ -0.26
CDCA3-210ENST00000545368 EEF2KO00418 725 aaKnown RBP13.42□□□□□ -0.26
CDCA3-210ENST00000545368 TRDMT1O14717 391 aaKnown RBP13.42□□□□□ -0.26
CDCA3-210ENST00000545368 TSPAN3O60637 253 aa13.42□□□□□ -0.26
CDCA3-210ENST00000545368 SRGAP2O75044 1071 aa13.42□□□□□ -0.26
CDCA3-210ENST00000545368 CYP17A1P05093 508 aa13.42□□□□□ -0.26
CDCA3-210ENST00000545368 ADH5P11766 374 aa13.42□□□□□ -0.26
CDCA3-210ENST00000545368 ARSAP15289 507 aa13.42□□□□□ -0.26
CDCA3-210ENST00000545368 RWDD2BP57060 319 aa13.42□□□□□ -0.26
CDCA3-210ENST00000545368 TPI1P60174 286 aa13.42□□□□□ -0.26
CDCA3-210ENST00000545368 PFKPQ01813 784 aa13.42□□□□□ -0.26
CDCA3-210ENST00000545368 GAD2Q05329 585 aa13.42□□□□□ -0.26
CDCA3-210ENST00000545368 TDGQ13569 410 aa13.42□□□□□ -0.26
CDCA3-210ENST00000545368 RUNX3Q13761 415 aa13.42□□□□□ -0.26
CDCA3-210ENST00000545368 DHCR24Q15392 516 aa13.42□□□□□ -0.26
CDCA3-210ENST00000545368 CA9Q16790 459 aa13.42□□□□□ -0.26
CDCA3-210ENST00000545368 ANO4Q32M45 955 aa13.42□□□□□ -0.26
CDCA3-210ENST00000545368 TJAP1Q5JTD0 557 aa13.42□□□□□ -0.26
CDCA3-210ENST00000545368 LY6G5CQ5SRR4 150 aa13.42□□□□□ -0.26
CDCA3-210ENST00000545368 RWDD4Q6NW29 188 aaKnown RBP13.42□□□□□ -0.26
CDCA3-210ENST00000545368 ZSCAN30Q86W11 494 aa13.42□□□□□ -0.26
CDCA3-210ENST00000545368 CCDC117Q8IWD4 279 aaPredicted RBP13.42□□□□□ -0.26
CDCA3-210ENST00000545368 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.42□□□□□ -0.26
CDCA3-210ENST00000545368 KATNAL2Q8IYT4 538 aa13.42□□□□□ -0.26
CDCA3-210ENST00000545368 ADGRG2Q8IZP9 1017 aa13.42□□□□□ -0.26
CDCA3-210ENST00000545368 SLC35F6Q8N357 371 aa13.42□□□□□ -0.26
CDCA3-210ENST00000545368 DNASE1L2Q92874 299 aa13.42□□□□□ -0.26
CDCA3-210ENST00000545368 CD101Q93033 1021 aa13.42□□□□□ -0.26
CDCA3-210ENST00000545368 TMA16Q96EY4 203 aaKnown RBP13.42□□□□□ -0.26
CDCA3-210ENST00000545368 RBM41Q96IZ5 413 aaKnown RBP13.42□□□□□ -0.26
CDCA3-210ENST00000545368 PRICKLE1Q96MT3 831 aaPredicted RBP13.42□□□□□ -0.26
CDCA3-210ENST00000545368 BBS2Q9BXC9 721 aa13.42□□□□□ -0.26
CDCA3-210ENST00000545368 ECT2Q9H8V3 914 aa13.42□□□□□ -0.26
CDCA3-210ENST00000545368 PCDH18Q9HCL0 1135 aa13.42□□□□□ -0.26
CDCA3-210ENST00000545368 KLHL11Q9NVR0 708 aa13.42□□□□□ -0.26
CDCA3-210ENST00000545368 STIM2Q9P246 746 aa13.42□□□□□ -0.26
CDCA3-210ENST00000545368 RCOR3Q9P2K3 495 aaPredicted RBP13.42□□□□□ -0.26
CDCA3-210ENST00000545368 PPARGC1AQ9UBK2 798 aaKnown RBP13.42□□□□□ -0.26
CDCA3-210ENST00000545368 PACSIN2Q9UNF0 486 aaPredicted RBP13.42□□□□□ -0.26
CDCA3-210ENST00000545368 PCDHA3Q9Y5H8 950 aa13.42□□□□□ -0.26
CDCA3-210ENST00000545368 XIRP2A4UGR9 3374 aa13.41□□□□□ -0.26
CDCA3-210ENST00000545368 TICRRQ7Z2Z1 1910 aa13.41□□□□□ -0.26
CDCA3-210ENST00000545368 FGF10O15520 208 aaPredicted RBP13.41□□□□□ -0.26
CDCA3-210ENST00000545368 DAPK3O43293 454 aa13.41□□□□□ -0.26
CDCA3-210ENST00000545368 TBL1XO60907 577 aa13.41□□□□□ -0.26
CDCA3-210ENST00000545368 LRIG2O94898 1065 aa13.41□□□□□ -0.26
CDCA3-210ENST00000545368 SRFP11831 508 aa13.41□□□□□ -0.26
CDCA3-210ENST00000545368 EPHB2P29323 1055 aa13.41□□□□□ -0.26
CDCA3-210ENST00000545368 CETN2P41208 172 aa13.41□□□□□ -0.26
CDCA3-210ENST00000545368 DNA2P51530 1060 aa13.41□□□□□ -0.26
CDCA3-210ENST00000545368 GNG11P61952 73 aa13.41□□□□□ -0.26
CDCA3-210ENST00000545368 TNK2Q07912 1038 aa13.41□□□□□ -0.26
CDCA3-210ENST00000545368 SEMA3BQ13214 749 aa13.41□□□□□ -0.26
CDCA3-210ENST00000545368 RPS6KA1Q15418 735 aa13.41□□□□□ -0.26
CDCA3-210ENST00000545368 ITPRIPL2Q3MIP1 535 aa13.41□□□□□ -0.26
CDCA3-210ENST00000545368 ATP13A4Q4VNC1 1196 aa13.41□□□□□ -0.26
CDCA3-210ENST00000545368 MPP7Q5T2T1 576 aa13.41□□□□□ -0.26
CDCA3-210ENST00000545368 MEI1Q5TIA1 1274 aa13.41□□□□□ -0.26
CDCA3-210ENST00000545368 MANEALQ5VSG8 457 aa13.41□□□□□ -0.26
CDCA3-210ENST00000545368 RFX8Q6ZV50 586 aa13.41□□□□□ -0.26
CDCA3-210ENST00000545368 C14orf80Q86SX3 495 aa13.41□□□□□ -0.26
CDCA3-210ENST00000545368 TMEM25Q86YD3 366 aa13.41□□□□□ -0.26
CDCA3-210ENST00000545368 CCDC50Q8IVM0 306 aa13.41□□□□□ -0.26
CDCA3-210ENST00000545368 ZNF557Q8N988 423 aaPredicted RBP13.41□□□□□ -0.26
CDCA3-210ENST00000545368 KRT35Q92764 455 aa13.41□□□□□ -0.26
CDCA3-210ENST00000545368 BHMTQ93088 406 aa13.41□□□□□ -0.26
CDCA3-210ENST00000545368 HES6Q96HZ4 224 aa13.41□□□□□ -0.26
CDCA3-210ENST00000545368 ZNF670Q9BS34 389 aa13.41□□□□□ -0.26
CDCA3-210ENST00000545368 CALN1Q9BXU9 219 aa13.41□□□□□ -0.26
CDCA3-210ENST00000545368 ZYG11BQ9C0D3 744 aa13.41□□□□□ -0.26
CDCA3-210ENST00000545368 CATSPERBQ9H7T0 1116 aa13.41□□□□□ -0.26
CDCA3-210ENST00000545368 HPS4Q9NQG7 708 aa13.41□□□□□ -0.26
CDCA3-210ENST00000545368 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.41□□□□□ -0.26
CDCA3-210ENST00000545368 MARK1Q9P0L2 795 aa13.41□□□□□ -0.26
CDCA3-210ENST00000545368 SORCS3Q9UPU3 1222 aa13.41□□□□□ -0.26
CDCA3-210ENST00000545368 JRKLQ9Y4A0 524 aa13.41□□□□□ -0.26
CDCA3-210ENST00000545368 IGLV3-10A0A075B6K4 115 aa13.4□□□□□ -0.26
CDCA3-210ENST00000545368 A0A1B0GVM2 712 aa13.4□□□□□ -0.26
CDCA3-210ENST00000545368 TCAF2A6NFQ2 919 aa13.4□□□□□ -0.26
CDCA3-210ENST00000545368 DRGXA6NNA5 263 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms