RNA–Protein interactions for RNA: ENST00000545266.1

COPA-206, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-206ENST00000545266 RFPL3SP0C7P2 107 aa6.27□□□□□ -1.41
COPA-206ENST00000545266 ACTR2P61160 394 aa6.27□□□□□ -1.41
COPA-206ENST00000545266 FOXF2Q12947 444 aa6.27□□□□□ -1.41
COPA-206ENST00000545266 MEX3CQ5U5Q3 659 aaKnown RBP6.27□□□□□ -1.41
COPA-206ENST00000545266 CYP26C1Q6V0L0 522 aa6.27□□□□□ -1.41
COPA-206ENST00000545266 TFAP2DQ7Z6R9 452 aa6.27□□□□□ -1.41
COPA-206ENST00000545266 UBE2Q1Q7Z7E8 422 aa6.27□□□□□ -1.41
COPA-206ENST00000545266 CPXCR1Q8N123 301 aa6.27□□□□□ -1.41
COPA-206ENST00000545266 CELF1Q92879 486 aaKnown RBP6.27□□□□□ -1.41
COPA-206ENST00000545266 ERVK-5Q9HDB9 667 aa6.27□□□□□ -1.41
COPA-206ENST00000545266 SLC22A11Q9NSA0 550 aa6.27□□□□□ -1.41
COPA-206ENST00000545266 KCND3Q9UK17 655 aa6.27□□□□□ -1.41
COPA-206ENST00000545266 TBC1D3DA0A087WVF3 549 aa6.26□□□□□ -1.41
COPA-206ENST00000545266 TBC1D3IA0A087WXS9 549 aa6.26□□□□□ -1.41
COPA-206ENST00000545266 TBC1D3EA0A087X179 549 aa6.26□□□□□ -1.41
COPA-206ENST00000545266 TBC1D3KA0A087X1G2 549 aa6.26□□□□□ -1.41
COPA-206ENST00000545266 TBC1D3BA6NDS4 549 aa6.26□□□□□ -1.41
COPA-206ENST00000545266 TBC1D3FA6NER0 549 aaPredicted RBP6.26□□□□□ -1.41
COPA-206ENST00000545266 TBC1D3LB9A6J9 549 aa6.26□□□□□ -1.41
COPA-206ENST00000545266 HNRNPRO43390 633 aaKnown RBP6.26□□□□□ -1.41
COPA-206ENST00000545266 TUBB4AP04350 444 aa6.26□□□□□ -1.41
COPA-206ENST00000545266 ENO1P06733 434 aaKnown RBP6.26□□□□□ -1.41
COPA-206ENST00000545266 SLC3A2P08195 630 aaKnown RBP6.26□□□□□ -1.41
COPA-206ENST00000545266 TBC1D3HP0C7X1 549 aa6.26□□□□□ -1.41
COPA-206ENST00000545266 FBLP22087 321 aaKnown RBP6.26□□□□□ -1.41
COPA-206ENST00000545266 SOX2P48431 317 aa6.26□□□□□ -1.41
COPA-206ENST00000545266 AARSP49588 968 aaKnown RBP eCLIP6.26□□□□□ -1.41
COPA-206ENST00000545266 SLC37A1P57057 533 aa6.26□□□□□ -1.41
COPA-206ENST00000545266 RPS6KA2Q15349 733 aa6.26□□□□□ -1.41
COPA-206ENST00000545266 PFKFB3Q16875 520 aaPredicted RBP6.26□□□□□ -1.41
COPA-206ENST00000545266 ADCK5Q3MIX3 580 aa6.26□□□□□ -1.41
COPA-206ENST00000545266 TBC1D3GQ6DHY5 549 aa6.26□□□□□ -1.41
COPA-206ENST00000545266 TBC1D3CQ6IPX1 549 aa6.26□□□□□ -1.41
COPA-206ENST00000545266 ZNF474Q6S9Z5 364 aaPredicted RBP6.26□□□□□ -1.41
COPA-206ENST00000545266 SMAP1Q8IYB5 467 aaPredicted RBP6.26□□□□□ -1.41
COPA-206ENST00000545266 ADGRF3Q8IZF5 1079 aa6.26□□□□□ -1.41
COPA-206ENST00000545266 TBC1D3Q8IZP1 549 aaPredicted RBP6.26□□□□□ -1.41
COPA-206ENST00000545266 GALNT16Q8N428 558 aa6.26□□□□□ -1.41
COPA-206ENST00000545266 PTGR2Q8N8N7 351 aaPredicted RBP6.26□□□□□ -1.41
COPA-206ENST00000545266 ADPRHL1Q8NDY3 354 aa6.26□□□□□ -1.41
COPA-206ENST00000545266 RUBCNQ92622 972 aa6.26□□□□□ -1.41
COPA-206ENST00000545266 RILPL2Q969X0 211 aa6.26□□□□□ -1.41
COPA-206ENST00000545266 KTI12Q96EK9 354 aaPredicted RBP6.26□□□□□ -1.41
COPA-206ENST00000545266 ZNF764Q96H86 408 aaPredicted RBP6.26□□□□□ -1.41
COPA-206ENST00000545266 SEPSECSQ9HD40 501 aaKnown RBP6.26□□□□□ -1.41
COPA-206ENST00000545266 PGAP2Q9UHJ9 254 aa6.26□□□□□ -1.41
COPA-206ENST00000545266 RCE1Q9Y256 329 aa6.26□□□□□ -1.41
COPA-206ENST00000545266 PCDHA10Q9Y5I2 948 aa6.26□□□□□ -1.41
COPA-206ENST00000545266 HEMK1Q9Y5R4 338 aaPredicted RBP6.26□□□□□ -1.41
COPA-206ENST00000545266 CERS1P27544 350 aa6.25□□□□□ -1.41
COPA-206ENST00000545266 VPS41P49754 854 aa6.25□□□□□ -1.41
COPA-206ENST00000545266 RCAN1P53805 252 aa6.25□□□□□ -1.41
COPA-206ENST00000545266 NANOS3P60323 173 aaKnown RBP6.25□□□□□ -1.41
COPA-206ENST00000545266 KPNB1Q14974 876 aaKnown RBP6.25□□□□□ -1.41
COPA-206ENST00000545266 FAM110CQ1W6H9 321 aa6.25□□□□□ -1.41
COPA-206ENST00000545266 ZNF354CQ86Y25 554 aa6.25□□□□□ -1.41
COPA-206ENST00000545266 CERS3Q8IU89 383 aa6.25□□□□□ -1.41
COPA-206ENST00000545266 BCAS4Q8TDM0 211 aa6.25□□□□□ -1.41
COPA-206ENST00000545266 CSGALNACT1Q8TDX6 532 aa6.25□□□□□ -1.41
COPA-206ENST00000545266 CLEC4CQ8WTT0 213 aa6.25□□□□□ -1.41
COPA-206ENST00000545266 IGFBPL1Q8WX77 278 aa6.25□□□□□ -1.41
COPA-206ENST00000545266 PPM1EQ8WY54 764 aa6.25□□□□□ -1.41
COPA-206ENST00000545266 MAP4K1Q92918 833 aa6.25□□□□□ -1.41
COPA-206ENST00000545266 ATP2A3Q93084 1043 aa6.25□□□□□ -1.41
COPA-206ENST00000545266 GPR78Q96P69 363 aa6.25□□□□□ -1.41
COPA-206ENST00000545266 PIGSQ96S52 555 aa6.25□□□□□ -1.41
COPA-206ENST00000545266 HTATIP2Q9BUP3 242 aa6.25□□□□□ -1.41
COPA-206ENST00000545266 TM2D2Q9BX73 214 aa6.25□□□□□ -1.41
COPA-206ENST00000545266 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.25□□□□□ -1.41
COPA-206ENST00000545266 SFXN1Q9H9B4 322 aa6.25□□□□□ -1.41
COPA-206ENST00000545266 MLXIPLQ9NP71 852 aa6.25□□□□□ -1.41
COPA-206ENST00000545266 SAGE1Q9NXZ1 904 aa6.25□□□□□ -1.41
COPA-206ENST00000545266 GJD2Q9UKL4 321 aa6.25□□□□□ -1.41
COPA-206ENST00000545266 CREB3O43889 395 aa6.24□□□□□ -1.41
COPA-206ENST00000545266 CNTN5O94779 1100 aa6.24□□□□□ -1.41
COPA-206ENST00000545266 CHN1P15882 459 aa6.24□□□□□ -1.41
COPA-206ENST00000545266 HSF1Q00613 529 aa6.24□□□□□ -1.41
COPA-206ENST00000545266 TMEM119Q4V9L6 283 aa6.24□□□□□ -1.41
COPA-206ENST00000545266 CC2D1BQ5T0F9 858 aaKnown RBP6.24□□□□□ -1.41
COPA-206ENST00000545266 RBM44Q6ZP01 1051 aaKnown RBP6.24□□□□□ -1.41
COPA-206ENST00000545266 C5orf34Q96MH7 638 aa6.24□□□□□ -1.41
COPA-206ENST00000545266 FCRL5Q96RD9 977 aa6.24□□□□□ -1.41
COPA-206ENST00000545266 EFHD1Q9BUP0 239 aa6.24□□□□□ -1.41
COPA-206ENST00000545266 ARHGAP39Q9C0H5 1083 aa6.24□□□□□ -1.41
COPA-206ENST00000545266 TXNRD2Q9NNW7 524 aa6.24□□□□□ -1.41
COPA-206ENST00000545266 BAG5Q9UL15 447 aa6.24□□□□□ -1.41
COPA-206ENST00000545266 AGAP5A6NIR3 686 aa6.23□□□□□ -1.41
COPA-206ENST00000545266 CGB1A6NKQ9 187 aa6.23□□□□□ -1.41
COPA-206ENST00000545266 CNPP09543 421 aaKnown RBP6.23□□□□□ -1.41
COPA-206ENST00000545266 PEPDP12955 493 aa6.23□□□□□ -1.41
COPA-206ENST00000545266 TGM2P21980 687 aa6.23□□□□□ -1.41
COPA-206ENST00000545266 TACR3P29371 465 aa6.23□□□□□ -1.41
COPA-206ENST00000545266 PPM1FP49593 454 aaPredicted RBP6.23□□□□□ -1.41
COPA-206ENST00000545266 BIRC3Q13489 604 aa6.23□□□□□ -1.41
COPA-206ENST00000545266 KIAA1614Q5VZ46 1190 aa6.23□□□□□ -1.41
COPA-206ENST00000545266 RTL10Q7L3V2 364 aa6.23□□□□□ -1.41
COPA-206ENST00000545266 SYT13Q7L8C5 426 aa6.23□□□□□ -1.41
COPA-206ENST00000545266 DNAJC10Q8IXB1 793 aa6.23□□□□□ -1.41
COPA-206ENST00000545266 OR52N4Q8NGI2 321 aa6.23□□□□□ -1.41
COPA-206ENST00000545266 AFG1LQ8WV93 481 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms