RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 HSFY1Q96LI6 401 aa13□□□□□ -0.33
ACTN1-206ENST00000544964 CPXM1Q96SM3 734 aa13□□□□□ -0.33
ACTN1-206ENST00000544964 BBS2Q9BXC9 721 aa13□□□□□ -0.33
ACTN1-206ENST00000544964 ULBP1Q9BZM6 244 aa13□□□□□ -0.33
ACTN1-206ENST00000544964 MIS12Q9H081 205 aa13□□□□□ -0.33
ACTN1-206ENST00000544964 ZNHIT6Q9NWK9 470 aaKnown RBP13□□□□□ -0.33
ACTN1-206ENST00000544964 ARHGAP20Q9P2F6 1191 aa13□□□□□ -0.33
ACTN1-206ENST00000544964 NUDT5Q9UKK9 219 aa13□□□□□ -0.33
ACTN1-206ENST00000544964 E5RJQ4 531 aa12.99□□□□□ -0.33
ACTN1-206ENST00000544964 STC2O76061 302 aa12.99□□□□□ -0.33
ACTN1-206ENST00000544964 LSM8O95777 96 aaKnown RBP12.99□□□□□ -0.33
ACTN1-206ENST00000544964 UNGP13051 313 aaPredicted RBP12.99□□□□□ -0.33
ACTN1-206ENST00000544964 NDUFV2P19404 249 aa12.99□□□□□ -0.33
ACTN1-206ENST00000544964 ITPKAP23677 461 aa12.99□□□□□ -0.33
ACTN1-206ENST00000544964 NTSR1P30989 418 aa12.99□□□□□ -0.33
ACTN1-206ENST00000544964 ATP5C1P36542 298 aaKnown RBP12.99□□□□□ -0.33
ACTN1-206ENST00000544964 CLEC16AQ2KHT3 1053 aa12.99□□□□□ -0.33
ACTN1-206ENST00000544964 PREPLQ4J6C6 727 aaPredicted RBP12.99□□□□□ -0.33
ACTN1-206ENST00000544964 PTPN20Q4JDL3 420 aa12.99□□□□□ -0.33
ACTN1-206ENST00000544964 C2CD6Q53TS8 623 aa12.99□□□□□ -0.33
ACTN1-206ENST00000544964 SPDYCQ5MJ68 293 aa12.99□□□□□ -0.33
ACTN1-206ENST00000544964 LYSMD4Q5XG99 296 aa12.99□□□□□ -0.33
ACTN1-206ENST00000544964 TRIM72Q6ZMU5 477 aa12.99□□□□□ -0.33
ACTN1-206ENST00000544964 TPGS1Q6ZTW0 290 aa12.99□□□□□ -0.33
ACTN1-206ENST00000544964 CCDC186Q7Z3E2 898 aa12.99□□□□□ -0.33
ACTN1-206ENST00000544964 SYT12Q8IV01 421 aa12.99□□□□□ -0.33
ACTN1-206ENST00000544964 SIX6OS1Q8N1H7 587 aa12.99□□□□□ -0.33
ACTN1-206ENST00000544964 SLC30A5Q8TAD4 765 aa12.99□□□□□ -0.33
ACTN1-206ENST00000544964 CLEC4CQ8WTT0 213 aa12.99□□□□□ -0.33
ACTN1-206ENST00000544964 STK32AQ8WU08 396 aa12.99□□□□□ -0.33
ACTN1-206ENST00000544964 NOX5Q96PH1 765 aa12.99□□□□□ -0.33
ACTN1-206ENST00000544964 GABRG3Q99928 467 aa12.99□□□□□ -0.33
ACTN1-206ENST00000544964 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.99□□□□□ -0.33
ACTN1-206ENST00000544964 SLC4A5Q9BY07 1137 aa12.99□□□□□ -0.33
ACTN1-206ENST00000544964 CD93Q9NPY3 652 aa12.99□□□□□ -0.33
ACTN1-206ENST00000544964 LSM7Q9UK45 103 aaKnown RBP12.99□□□□□ -0.33
ACTN1-206ENST00000544964 PILRBQ9UKJ0 227 aa12.99□□□□□ -0.33
ACTN1-206ENST00000544964 BZW2Q9Y6E2 419 aaKnown RBP12.99□□□□□ -0.33
ACTN1-206ENST00000544964 USP3Q9Y6I4 520 aa12.99□□□□□ -0.33
ACTN1-206ENST00000544964 FREM2Q5SZK8 3169 aa12.99□□□□□ -0.33
ACTN1-206ENST00000544964 KNL1Q8NG31 2342 aa12.98□□□□□ -0.33
ACTN1-206ENST00000544964 IGHV1OR15-9A0A0B4J2B8 117 aa12.98□□□□□ -0.33
ACTN1-206ENST00000544964 TMCO5BA8MYB1 307 aa12.98□□□□□ -0.33
ACTN1-206ENST00000544964 DDX3XO00571 662 aaKnown RBP eCLIP12.98□□□□□ -0.33
ACTN1-206ENST00000544964 ZBED1O96006 694 aa12.98□□□□□ -0.33
ACTN1-206ENST00000544964 KLKB1P03952 638 aa12.98□□□□□ -0.33
ACTN1-206ENST00000544964 ERBB2P04626 1255 aa12.98□□□□□ -0.33
ACTN1-206ENST00000544964 CISD3P0C7P0 127 aa12.98□□□□□ -0.33
ACTN1-206ENST00000544964 RARGP13631 454 aa12.98□□□□□ -0.33
ACTN1-206ENST00000544964 ENGP17813 658 aa12.98□□□□□ -0.33
ACTN1-206ENST00000544964 CSRP1P21291 193 aaKnown RBP12.98□□□□□ -0.33
ACTN1-206ENST00000544964 HOXD12P35452 270 aa12.98□□□□□ -0.33
ACTN1-206ENST00000544964 EIF4A3P38919 411 aaKnown RBP12.98□□□□□ -0.33
ACTN1-206ENST00000544964 ACADSBP45954 432 aa12.98□□□□□ -0.33
ACTN1-206ENST00000544964 RPL34P49207 117 aaKnown RBP12.98□□□□□ -0.33
ACTN1-206ENST00000544964 MMS22LQ6ZRQ5 1243 aa12.98□□□□□ -0.33
ACTN1-206ENST00000544964 TMEM110Q86TL2 294 aa12.98□□□□□ -0.33
ACTN1-206ENST00000544964 ERICH1Q86X53 443 aa12.98□□□□□ -0.33
ACTN1-206ENST00000544964 DNAAF5Q86Y56 855 aa12.98□□□□□ -0.33
ACTN1-206ENST00000544964 SCUBE3Q8IX30 993 aa12.98□□□□□ -0.33
ACTN1-206ENST00000544964 CHPFQ8IZ52 775 aa12.98□□□□□ -0.33
ACTN1-206ENST00000544964 PGBD3Q8N328 593 aa12.98□□□□□ -0.33
ACTN1-206ENST00000544964 IPO4Q8TEX9 1081 aaKnown RBP12.98□□□□□ -0.33
ACTN1-206ENST00000544964 BHMTQ93088 406 aa12.98□□□□□ -0.33
ACTN1-206ENST00000544964 ERLEC1Q96DZ1 483 aa12.98□□□□□ -0.33
ACTN1-206ENST00000544964 CHP1Q99653 195 aa12.98□□□□□ -0.33
ACTN1-206ENST00000544964 TMEM121BQ9BXQ6 578 aaPredicted RBP12.98□□□□□ -0.33
ACTN1-206ENST00000544964 SYNCQ9H7C4 482 aa12.98□□□□□ -0.33
ACTN1-206ENST00000544964 FSCN3Q9NQT6 498 aa12.98□□□□□ -0.33
ACTN1-206ENST00000544964 TAS2R14Q9NYV8 317 aa12.98□□□□□ -0.33
ACTN1-206ENST00000544964 IMPACTQ9P2X3 320 aa12.98□□□□□ -0.33
ACTN1-206ENST00000544964 ADAMTS1Q9UHI8 967 aa12.98□□□□□ -0.33
ACTN1-206ENST00000544964 DNMT3LQ9UJW3 386 aa12.98□□□□□ -0.33
ACTN1-206ENST00000544964 ANKRD11Q6UB99 2663 aaPredicted RBP12.98□□□□□ -0.33
ACTN1-206ENST00000544964 NUMA1Q14980 2115 aa12.97□□□□□ -0.33
ACTN1-206ENST00000544964 PAPSS1O43252 624 aaPredicted RBP12.97□□□□□ -0.33
ACTN1-206ENST00000544964 MAP3K13O43283 966 aa12.97□□□□□ -0.33
ACTN1-206ENST00000544964 PENKP01210 267 aaPredicted RBP12.97□□□□□ -0.33
ACTN1-206ENST00000544964 CEACAM1P13688 526 aa12.97□□□□□ -0.33
ACTN1-206ENST00000544964 MAPK8P45983 427 aa12.97□□□□□ -0.33
ACTN1-206ENST00000544964 NSFP46459 744 aaKnown RBP12.97□□□□□ -0.33
ACTN1-206ENST00000544964 DAOAP59103 153 aa12.97□□□□□ -0.33
ACTN1-206ENST00000544964 RPL6Q02878 288 aaKnown RBP12.97□□□□□ -0.33
ACTN1-206ENST00000544964 CENPCQ03188 943 aa12.97□□□□□ -0.33
ACTN1-206ENST00000544964 LMAN2Q12907 356 aa12.97□□□□□ -0.33
ACTN1-206ENST00000544964 BYSLQ13895 437 aaKnown RBP12.97□□□□□ -0.33
ACTN1-206ENST00000544964 C10orf120Q5SQS8 335 aa12.97□□□□□ -0.33
ACTN1-206ENST00000544964 PM20D1Q6GTS8 502 aa12.97□□□□□ -0.33
ACTN1-206ENST00000544964 OR6B2Q6IFH4 312 aa12.97□□□□□ -0.33
ACTN1-206ENST00000544964 SLC23A3Q6PIS1 610 aa12.97□□□□□ -0.33
ACTN1-206ENST00000544964 FAM183BPQ6ZVS7 135 aa12.97□□□□□ -0.33
ACTN1-206ENST00000544964 BHLHA9Q7RTU4 235 aa12.97□□□□□ -0.33
ACTN1-206ENST00000544964 PHLDB2Q86SQ0 1253 aa12.97□□□□□ -0.33
ACTN1-206ENST00000544964 SLC41A1Q8IVJ1 513 aa12.97□□□□□ -0.33
ACTN1-206ENST00000544964 ZNF276Q8N554 614 aa12.97□□□□□ -0.33
ACTN1-206ENST00000544964 XPO6Q96QU8 1125 aaKnown RBP12.97□□□□□ -0.33
ACTN1-206ENST00000544964 C11orf70Q9BRQ4 267 aa12.97□□□□□ -0.33
ACTN1-206ENST00000544964 SLC6A17Q9H1V8 727 aa12.97□□□□□ -0.33
ACTN1-206ENST00000544964 CAPN10Q9HC96 672 aa12.97□□□□□ -0.33
ACTN1-206ENST00000544964 CNGB3Q9NQW8 809 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms