RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 MAMLD1Q13495 774 aa13.09□□□□□ -0.31
CHD4-211ENST00000544484 TRMT11Q7Z4G4 463 aaKnown RBP13.09□□□□□ -0.31
CHD4-211ENST00000544484 NT5DC4Q86YG4 428 aa13.09□□□□□ -0.31
CHD4-211ENST00000544484 LNX1Q8TBB1 728 aaPredicted RBP13.09□□□□□ -0.31
CHD4-211ENST00000544484 DDX28Q9NUL7 540 aaKnown RBP13.09□□□□□ -0.31
CHD4-211ENST00000544484 TAGLN3Q9UI15 199 aa13.09□□□□□ -0.31
CHD4-211ENST00000544484 LNPEPQ9UIQ6 1025 aa13.09□□□□□ -0.31
CHD4-211ENST00000544484 CRYL1Q9Y2S2 319 aa13.09□□□□□ -0.31
CHD4-211ENST00000544484 UBDO15205 165 aa13.09□□□□□ -0.31
CHD4-211ENST00000544484 SLC2A4P14672 509 aa13.09□□□□□ -0.31
CHD4-211ENST00000544484 PGAM1P18669 254 aa13.09□□□□□ -0.31
CHD4-211ENST00000544484 CALB2P22676 271 aa13.09□□□□□ -0.31
CHD4-211ENST00000544484 NR2C2P49116 596 aa13.09□□□□□ -0.31
CHD4-211ENST00000544484 NBPF20Q3BBV1 942 aa13.09□□□□□ -0.31
CHD4-211ENST00000544484 CENPLQ8N0S6 344 aaPredicted RBP13.09□□□□□ -0.31
CHD4-211ENST00000544484 RIN3Q8TB24 985 aa13.09□□□□□ -0.31
CHD4-211ENST00000544484 PPP1R10Q96QC0 940 aaKnown RBP13.09□□□□□ -0.31
CHD4-211ENST00000544484 APPL1Q9UKG1 709 aa13.09□□□□□ -0.31
CHD4-211ENST00000544484 CYP3A7-CYP3A51PA0A087WV96 503 aa13.09□□□□□ -0.31
CHD4-211ENST00000544484 PDE2AO00408 941 aaPredicted RBP13.09□□□□□ -0.31
CHD4-211ENST00000544484 USP1O94782 785 aa13.09□□□□□ -0.31
CHD4-211ENST00000544484 CYP3A7P24462 503 aa13.09□□□□□ -0.31
CHD4-211ENST00000544484 TRPC1P48995 793 aa13.09□□□□□ -0.31
CHD4-211ENST00000544484 CNTN1Q12860 1018 aa13.09□□□□□ -0.31
CHD4-211ENST00000544484 PLCL1Q15111 1095 aa13.09□□□□□ -0.31
CHD4-211ENST00000544484 GLT6D1Q7Z4J2 308 aa13.09□□□□□ -0.31
CHD4-211ENST00000544484 ZBTB10Q96DT7 871 aa13.09□□□□□ -0.31
CHD4-211ENST00000544484 SENP6Q9GZR1 1112 aaPredicted RBP13.09□□□□□ -0.31
CHD4-211ENST00000544484 M0R3G1 203 aa13.09□□□□□ -0.31
CHD4-211ENST00000544484 BUD23O43709 281 aaKnown RBP13.09□□□□□ -0.31
CHD4-211ENST00000544484 SMIM10L2AP0DMW4 78 aa13.09□□□□□ -0.31
CHD4-211ENST00000544484 SMIM10L2BP0DMW5 78 aa13.09□□□□□ -0.31
CHD4-211ENST00000544484 ZC3H12AQ5D1E8 599 aaKnown RBP13.09□□□□□ -0.31
CHD4-211ENST00000544484 PHF21AQ96BD5 680 aa13.09□□□□□ -0.31
CHD4-211ENST00000544484 ARHGAP23Q9P227 1491 aa13.09□□□□□ -0.31
CHD4-211ENST00000544484 SH3BGRLO75368 114 aa13.09□□□□□ -0.31
CHD4-211ENST00000544484 ZCCHC18P0CG32 403 aa13.09□□□□□ -0.31
CHD4-211ENST00000544484 FAM183BPQ6ZVS7 135 aa13.09□□□□□ -0.31
CHD4-211ENST00000544484 DEFB107AQ8IZN7 70 aa13.09□□□□□ -0.31
CHD4-211ENST00000544484 POU5F2Q8N7G0 328 aa13.09□□□□□ -0.31
CHD4-211ENST00000544484 ETNPPLQ8TBG4 499 aa13.09□□□□□ -0.31
CHD4-211ENST00000544484 MAGED4Q96JG8 741 aa13.09□□□□□ -0.31
CHD4-211ENST00000544484 RMND5AQ9H871 391 aa13.09□□□□□ -0.31
CHD4-211ENST00000544484 TCF7L2Q9NQB0 619 aa13.09□□□□□ -0.31
CHD4-211ENST00000544484 MROH1Q8NDA8 1641 aa13.08□□□□□ -0.31
CHD4-211ENST00000544484 NRCAMQ92823 1304 aa13.08□□□□□ -0.31
CHD4-211ENST00000544484 RCCD1A6NED2 376 aa13.08□□□□□ -0.31
CHD4-211ENST00000544484 SPATA31C1P0DKV0 1188 aa13.08□□□□□ -0.31
CHD4-211ENST00000544484 ERVK-10P10266 1014 aa13.08□□□□□ -0.31
CHD4-211ENST00000544484 ATP6V1B2P21281 511 aa13.08□□□□□ -0.31
CHD4-211ENST00000544484 POU1F1P28069 291 aa13.08□□□□□ -0.31
CHD4-211ENST00000544484 MARCKSL1P49006 195 aa13.08□□□□□ -0.31
CHD4-211ENST00000544484 MMRN1Q13201 1228 aa13.08□□□□□ -0.31
CHD4-211ENST00000544484 C16orf46Q6P387 395 aa13.08□□□□□ -0.31
CHD4-211ENST00000544484 IYDQ6PHW0 289 aa13.08□□□□□ -0.31
CHD4-211ENST00000544484 RNF148Q8N7C7 305 aa13.08□□□□□ -0.31
CHD4-211ENST00000544484 TBL1YQ9BQ87 522 aa13.08□□□□□ -0.31
CHD4-211ENST00000544484 MRIQ9BWK5 157 aa13.08□□□□□ -0.31
CHD4-211ENST00000544484 RERGLQ9H628 205 aa13.08□□□□□ -0.31
CHD4-211ENST00000544484 MARCH2Q9P0N8 246 aa13.08□□□□□ -0.31
CHD4-211ENST00000544484 OR12D3Q9UGF7 316 aa13.08□□□□□ -0.31
CHD4-211ENST00000544484 DDX20Q9UHI6 824 aaKnown RBP13.08□□□□□ -0.31
CHD4-211ENST00000544484 UMODL1Q5DID0 1318 aa13.08□□□□□ -0.32
CHD4-211ENST00000544484 TM4SF1P30408 202 aa13.08□□□□□ -0.32
CHD4-211ENST00000544484 DSG1Q02413 1049 aa13.08□□□□□ -0.32
CHD4-211ENST00000544484 GRTP1Q5TC63 336 aa13.08□□□□□ -0.32
CHD4-211ENST00000544484 PHGDHO43175 533 aaKnown RBP13.08□□□□□ -0.32
CHD4-211ENST00000544484 SASH3O75995 380 aa13.08□□□□□ -0.32
CHD4-211ENST00000544484 IMPDH2P12268 514 aa13.08□□□□□ -0.32
CHD4-211ENST00000544484 MSH3P20585 1137 aa13.08□□□□□ -0.32
CHD4-211ENST00000544484 KATNAL2Q8IYT4 538 aa13.08□□□□□ -0.32
CHD4-211ENST00000544484 C10orf53Q8N6V4 93 aa13.08□□□□□ -0.32
CHD4-211ENST00000544484 CDK5RAP1Q96SZ6 601 aaKnown RBP13.08□□□□□ -0.32
CHD4-211ENST00000544484 TRHDEQ9UKU6 1024 aa13.08□□□□□ -0.32
CHD4-211ENST00000544484 TNFSF13BQ9Y275 285 aa13.08□□□□□ -0.32
CHD4-211ENST00000544484 MEI4A8MW99 385 aa13.08□□□□□ -0.32
CHD4-211ENST00000544484 RBAK-RBAKDNI3L0D1 243 aa13.08□□□□□ -0.32
CHD4-211ENST00000544484 PIAS1O75925 651 aa13.08□□□□□ -0.32
CHD4-211ENST00000544484 MPOP05164 745 aa13.08□□□□□ -0.32
CHD4-211ENST00000544484 S100A5P33763 92 aa13.08□□□□□ -0.32
CHD4-211ENST00000544484 WNT8BQ93098 351 aa13.08□□□□□ -0.32
CHD4-211ENST00000544484 ARMCX1Q9P291 453 aa13.08□□□□□ -0.32
CHD4-211ENST00000544484 RAB21Q9UL25 225 aa13.08□□□□□ -0.32
CHD4-211ENST00000544484 PCDHGC5Q9Y5F6 944 aa13.08□□□□□ -0.32
CHD4-211ENST00000544484 HNRNPRO43390 633 aaKnown RBP13.08□□□□□ -0.32
CHD4-211ENST00000544484 MAFO75444 373 aaPredicted RBP13.08□□□□□ -0.32
CHD4-211ENST00000544484 SMNDC1O75940 238 aaKnown RBP eCLIP13.08□□□□□ -0.328e-12■■■■□ 26.7
CHD4-211ENST00000544484 PARNO95453 639 aaKnown RBP13.08□□□□□ -0.32
CHD4-211ENST00000544484 SYTL1Q8IYJ3 562 aa13.08□□□□□ -0.32
CHD4-211ENST00000544484 FBXO39Q8N4B4 442 aa13.08□□□□□ -0.32
CHD4-211ENST00000544484 ACO2Q99798 780 aaKnown RBP13.08□□□□□ -0.32
CHD4-211ENST00000544484 PSMB4P28070 264 aa13.07□□□□□ -0.32
CHD4-211ENST00000544484 ALDH9A1P49189 494 aa13.07□□□□□ -0.32
CHD4-211ENST00000544484 RRP1BQ14684 758 aaKnown RBP13.07□□□□□ -0.32
CHD4-211ENST00000544484 EEF1DP3Q658K8 133 aa13.07□□□□□ -0.32
CHD4-211ENST00000544484 GANQ9H2C0 597 aa13.07□□□□□ -0.32
CHD4-211ENST00000544484 MID1IP1Q9NPA3 183 aa13.07□□□□□ -0.32
CHD4-211ENST00000544484 PADI4Q9UM07 663 aa13.07□□□□□ -0.32
CHD4-211ENST00000544484 IPPQ9Y573 584 aa13.07□□□□□ -0.32
CHD4-211ENST00000544484 SLCO1B7G3V0H7 640 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms