RNA–Protein interactions for RNA: ENST00000544425.2

SPDEF-202, Transcript of SAM pointed domain containing ETS transcription factor, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SPDEF, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEF-202ENST00000544425 HOXC13P31276 330 aa16.52■□□□□ 0.23
SPDEF-202ENST00000544425 ALDH7A1P49419 539 aaKnown RBP16.52■□□□□ 0.23
SPDEF-202ENST00000544425 GPR15P49685 360 aa16.52■□□□□ 0.23
SPDEF-202ENST00000544425 PSEN1P49768 467 aa16.52■□□□□ 0.23
SPDEF-202ENST00000544425 GEMIN4P57678 1058 aaKnown RBP16.52■□□□□ 0.23
SPDEF-202ENST00000544425 GALNT2Q10471 571 aa16.52■□□□□ 0.23
SPDEF-202ENST00000544425 FAXCQ5TGI0 409 aa16.52■□□□□ 0.23
SPDEF-202ENST00000544425 RSPO2Q6UXX9 243 aaPredicted RBP16.52■□□□□ 0.23
SPDEF-202ENST00000544425 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.52■□□□□ 0.23
SPDEF-202ENST00000544425 CCDC33Q8N5R6 958 aa16.52■□□□□ 0.23
SPDEF-202ENST00000544425 COLGALT1Q8NBJ5 622 aa16.52■□□□□ 0.23
SPDEF-202ENST00000544425 BCAS4Q8TDM0 211 aa16.52■□□□□ 0.23
SPDEF-202ENST00000544425 B3GALT6Q96L58 329 aa16.52■□□□□ 0.23
SPDEF-202ENST00000544425 C1orf74Q96LT6 269 aa16.52■□□□□ 0.23
SPDEF-202ENST00000544425 CEP295NLQ96MC4 621 aa16.52■□□□□ 0.23
SPDEF-202ENST00000544425 XAB2Q9HCS7 855 aaKnown RBP16.52■□□□□ 0.23
SPDEF-202ENST00000544425 EIF2B3Q9NR50 452 aaKnown RBP16.52■□□□□ 0.23
SPDEF-202ENST00000544425 OSER1Q9NX31 292 aa16.52■□□□□ 0.23
SPDEF-202ENST00000544425 SFMBT1Q9UHJ3 866 aa16.52■□□□□ 0.23
SPDEF-202ENST00000544425 RNF103O00237 685 aa16.51■□□□□ 0.23
SPDEF-202ENST00000544425 GSTA2P09210 222 aa16.51■□□□□ 0.23
SPDEF-202ENST00000544425 SLC2A3P11169 496 aa16.51■□□□□ 0.23
SPDEF-202ENST00000544425 MLNP12872 115 aa16.51■□□□□ 0.23
SPDEF-202ENST00000544425 CHN1P15882 459 aa16.51■□□□□ 0.23
SPDEF-202ENST00000544425 YWHAQP27348 245 aa16.51■□□□□ 0.23
SPDEF-202ENST00000544425 MANEALQ5VSG8 457 aa16.51■□□□□ 0.23
SPDEF-202ENST00000544425 SDHAF4Q5VUM1 108 aa16.51■□□□□ 0.23
SPDEF-202ENST00000544425 TAS1R1Q7RTX1 841 aa16.51■□□□□ 0.23
SPDEF-202ENST00000544425 TMEM173Q86WV6 379 aaPredicted RBP16.51■□□□□ 0.23
SPDEF-202ENST00000544425 IGDCC3Q8IVU1 814 aa16.51■□□□□ 0.23
SPDEF-202ENST00000544425 LZTR1Q8N653 840 aa16.51■□□□□ 0.23
SPDEF-202ENST00000544425 MDM1Q8TC05 714 aa16.51■□□□□ 0.23
SPDEF-202ENST00000544425 SLC39A13Q96H72 371 aa16.51■□□□□ 0.23
SPDEF-202ENST00000544425 ZNF333Q96JL9 665 aa16.51■□□□□ 0.23
SPDEF-202ENST00000544425 SELENOSQ9BQE4 189 aa16.51■□□□□ 0.23
SPDEF-202ENST00000544425 DHRS4Q9BTZ2 278 aa16.51■□□□□ 0.23
SPDEF-202ENST00000544425 TLR6Q9Y2C9 796 aa16.51■□□□□ 0.23
SPDEF-202ENST00000544425 POC1B-GALNT4F8VUJ3 575 aa16.5■□□□□ 0.23
SPDEF-202ENST00000544425 PAGE1O75459 146 aa16.5■□□□□ 0.23
SPDEF-202ENST00000544425 VNN2O95498 520 aa16.5■□□□□ 0.23
SPDEF-202ENST00000544425 USP46P62068 366 aa16.5■□□□□ 0.23
SPDEF-202ENST00000544425 RPL10AP62906 217 aaKnown RBP16.5■□□□□ 0.23
SPDEF-202ENST00000544425 SLC8B1Q6J4K2 584 aa16.5■□□□□ 0.23
SPDEF-202ENST00000544425 ADGRD1Q6QNK2 874 aa16.5■□□□□ 0.23
SPDEF-202ENST00000544425 RNF19BQ6ZMZ0 732 aa16.5■□□□□ 0.23
SPDEF-202ENST00000544425 RNF168Q8IYW5 571 aaPredicted RBP16.5■□□□□ 0.23
SPDEF-202ENST00000544425 ANKLE1Q8NAG6 615 aa16.5■□□□□ 0.23
SPDEF-202ENST00000544425 FBF1Q8TES7 1133 aa16.5■□□□□ 0.23
SPDEF-202ENST00000544425 BCL7CQ8WUZ0 217 aaPredicted RBP16.5■□□□□ 0.23
SPDEF-202ENST00000544425 VWCEQ96DN2 955 aa16.5■□□□□ 0.23
SPDEF-202ENST00000544425 VAT1Q99536 393 aa16.5■□□□□ 0.23
SPDEF-202ENST00000544425 CWH43Q9H720 699 aa16.5■□□□□ 0.23
SPDEF-202ENST00000544425 TMEM39AQ9NV64 488 aa16.5■□□□□ 0.23
SPDEF-202ENST00000544425 SENP1Q9P0U3 644 aa16.5■□□□□ 0.23
SPDEF-202ENST00000544425 PSMC3IPQ9P2W1 217 aaPredicted RBP16.5■□□□□ 0.23
SPDEF-202ENST00000544425 NEU3Q9UQ49 428 aa16.5■□□□□ 0.23
SPDEF-202ENST00000544425 CHMP2BQ9UQN3 213 aa16.5■□□□□ 0.23
SPDEF-202ENST00000544425 SNX10Q9Y5X0 201 aa16.5■□□□□ 0.23
SPDEF-202ENST00000544425 BACE2Q9Y5Z0 518 aa16.5■□□□□ 0.23
SPDEF-202ENST00000544425 PTPRDP23468 1912 aa16.5■□□□□ 0.23
SPDEF-202ENST00000544425 TTC3P53804 2025 aa16.5■□□□□ 0.23
SPDEF-202ENST00000544425 GMNCA6NCL1 334 aa16.5■□□□□ 0.23
SPDEF-202ENST00000544425 TRDMT1O14717 391 aaKnown RBP16.5■□□□□ 0.23
SPDEF-202ENST00000544425 FGF10O15520 208 aaPredicted RBP16.5■□□□□ 0.23
SPDEF-202ENST00000544425 AVILO75366 819 aa16.5■□□□□ 0.23
SPDEF-202ENST00000544425 GARSP41250 739 aaKnown RBP16.5■□□□□ 0.23
SPDEF-202ENST00000544425 MLLT6P55198 1093 aaPredicted RBP16.5■□□□□ 0.23
SPDEF-202ENST00000544425 HNRNPH2P55795 449 aaKnown RBP16.5■□□□□ 0.23
SPDEF-202ENST00000544425 ARPP19P56211 112 aa16.5■□□□□ 0.23
SPDEF-202ENST00000544425 USP41Q3LFD5 358 aa16.5■□□□□ 0.23
SPDEF-202ENST00000544425 ZNF534Q76KX8 674 aa16.5■□□□□ 0.23
SPDEF-202ENST00000544425 TP53INP2Q8IXH6 220 aa16.5■□□□□ 0.23
SPDEF-202ENST00000544425 ZNF567Q8N184 647 aa16.5■□□□□ 0.23
SPDEF-202ENST00000544425 AGGF1Q8N302 714 aaeCLIP16.5■□□□□ 0.23
SPDEF-202ENST00000544425 TTC9BQ8N6N2 239 aa16.5■□□□□ 0.23
SPDEF-202ENST00000544425 NPWQ8N729 165 aa16.5■□□□□ 0.23
SPDEF-202ENST00000544425 FCRL2Q96LA5 508 aaPredicted RBP16.5■□□□□ 0.23
SPDEF-202ENST00000544425 XPO6Q96QU8 1125 aaKnown RBP16.5■□□□□ 0.23
SPDEF-202ENST00000544425 CYTH2Q99418 400 aa16.5■□□□□ 0.23
SPDEF-202ENST00000544425 CCDC134Q9H6E4 229 aa16.5■□□□□ 0.23
SPDEF-202ENST00000544425 CATSPERBQ9H7T0 1116 aa16.5■□□□□ 0.23
SPDEF-202ENST00000544425 OLA1Q9NTK5 396 aaKnown RBP16.5■□□□□ 0.23
SPDEF-202ENST00000544425 INTS9Q9NV88 658 aaKnown RBP16.5■□□□□ 0.23
SPDEF-202ENST00000544425 MTRRQ9UBK8 725 aa16.5■□□□□ 0.23
SPDEF-202ENST00000544425 TBK1Q9UHD2 729 aa16.5■□□□□ 0.23
SPDEF-202ENST00000544425 TRHDEQ9UKU6 1024 aa16.5■□□□□ 0.23
SPDEF-202ENST00000544425 NR2E3Q9Y5X4 410 aa16.5■□□□□ 0.23
SPDEF-202ENST00000544425 PATJQ8NI35 1801 aa16.49■□□□□ 0.23
SPDEF-202ENST00000544425 ABHD14A-ACY1A0A1B0GW23 586 aa16.49■□□□□ 0.23
SPDEF-202ENST00000544425 PBX3P40426 434 aa16.49■□□□□ 0.23
SPDEF-202ENST00000544425 MGAT5BQ3V5L5 792 aa16.49■□□□□ 0.23
SPDEF-202ENST00000544425 FAM182AQ5T1J6 154 aa16.49■□□□□ 0.23
SPDEF-202ENST00000544425 SYCP2LQ5T4T6 812 aa16.49■□□□□ 0.23
SPDEF-202ENST00000544425 ARTNQ5T4W7 220 aa16.49■□□□□ 0.23
SPDEF-202ENST00000544425 CAPN12Q6ZSI9 719 aa16.49■□□□□ 0.23
SPDEF-202ENST00000544425 TRABD2AQ86V40 505 aa16.49■□□□□ 0.23
SPDEF-202ENST00000544425 FBXO22Q8NEZ5 403 aa16.49■□□□□ 0.23
SPDEF-202ENST00000544425 ATXN2LQ8WWM7 1075 aaKnown RBP16.49■□□□□ 0.23
SPDEF-202ENST00000544425 FBXO32Q969P5 355 aa16.49■□□□□ 0.23
SPDEF-202ENST00000544425 TOP1MTQ969P6 601 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms