RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 TMEM132CQ8N3T6 1108 aa15.77■□□□□ 0.11
CHD4-210ENST00000544040 TAS1R2Q8TE23 839 aa15.77■□□□□ 0.11
CHD4-210ENST00000544040 NUAK2Q9H093 628 aa15.77■□□□□ 0.11
CHD4-210ENST00000544040 KDM6AO15550 1401 aaPredicted RBP15.77■□□□□ 0.11
CHD4-210ENST00000544040 CNTNAP2Q9UHC6 1331 aa15.77■□□□□ 0.11
CHD4-210ENST00000544040 BCLAF3A2AJT9 711 aaKnown RBP15.77■□□□□ 0.11
CHD4-210ENST00000544040 OGTO15294 1046 aa15.77■□□□□ 0.11
CHD4-210ENST00000544040 SYNCRIPO60506 623 aaKnown RBP15.77■□□□□ 0.11
CHD4-210ENST00000544040 ZC3H11AO75152 810 aaKnown RBP eCLIP15.77■□□□□ 0.112e-9■□□□□ 8.9
CHD4-210ENST00000544040 CYP4F2P78329 520 aa15.77■□□□□ 0.11
CHD4-210ENST00000544040 CYP4F3Q08477 520 aa15.77■□□□□ 0.11
CHD4-210ENST00000544040 MPZL3Q6UWV2 235 aa15.77■□□□□ 0.11
CHD4-210ENST00000544040 ZBTB46Q86UZ6 589 aa15.77■□□□□ 0.11
CHD4-210ENST00000544040 CAMKK1Q8N5S9 505 aa15.77■□□□□ 0.11
CHD4-210ENST00000544040 SETD9Q8NE22 299 aa15.77■□□□□ 0.11
CHD4-210ENST00000544040 ENGASEQ8NFI3 743 aa15.77■□□□□ 0.11
CHD4-210ENST00000544040 EPB41L1Q9H4G0 881 aa15.77■□□□□ 0.11
CHD4-210ENST00000544040 THAP1Q9NVV9 213 aa15.77■□□□□ 0.11
CHD4-210ENST00000544040 COG5Q9UP83 839 aa15.77■□□□□ 0.11
CHD4-210ENST00000544040 INVSQ9Y283 1065 aa15.77■□□□□ 0.11
CHD4-210ENST00000544040 ADAMTS12P58397 1594 aa15.76■□□□□ 0.11
CHD4-210ENST00000544040 OR6A2O95222 327 aa15.76■□□□□ 0.11
CHD4-210ENST00000544040 ERCC2P18074 760 aa15.76■□□□□ 0.11
CHD4-210ENST00000544040 GSTM5P46439 218 aa15.76■□□□□ 0.11
CHD4-210ENST00000544040 ZIK1Q3SY52 487 aaPredicted RBP15.76■□□□□ 0.11
CHD4-210ENST00000544040 ATAD3BQ5T9A4 648 aa15.76■□□□□ 0.11
CHD4-210ENST00000544040 EXOC3L1Q86VI1 746 aa15.76■□□□□ 0.11
CHD4-210ENST00000544040 KRT73Q86Y46 540 aa15.76■□□□□ 0.11
CHD4-210ENST00000544040 LRRC49Q8IUZ0 686 aa15.76■□□□□ 0.11
CHD4-210ENST00000544040 BPIFB6Q8NFQ5 453 aa15.76■□□□□ 0.11
CHD4-210ENST00000544040 MAGEE2Q8TD90 523 aaPredicted RBP15.76■□□□□ 0.11
CHD4-210ENST00000544040 ZNF75CPQ92670 426 aaPredicted RBP15.76■□□□□ 0.11
CHD4-210ENST00000544040 TMEM176AQ96HP8 235 aa15.76■□□□□ 0.11
CHD4-210ENST00000544040 CISHQ9NSE2 258 aa15.76■□□□□ 0.11
CHD4-210ENST00000544040 NRKQ7Z2Y5 1582 aa15.76■□□□□ 0.11
CHD4-210ENST00000544040 KRT6AP02538 564 aa15.76■□□□□ 0.11
CHD4-210ENST00000544040 ME2P23368 584 aa15.76■□□□□ 0.11
CHD4-210ENST00000544040 NPTX2P47972 431 aa15.76■□□□□ 0.11
CHD4-210ENST00000544040 TKTL1P51854 596 aa15.76■□□□□ 0.11
CHD4-210ENST00000544040 RHAGQ02094 409 aa15.76■□□□□ 0.11
CHD4-210ENST00000544040 EIF2B5Q13144 721 aaKnown RBP15.76■□□□□ 0.11
CHD4-210ENST00000544040 ERMARDQ5T6L9 678 aa15.76■□□□□ 0.11
CHD4-210ENST00000544040 MILR1Q7Z6M3 343 aa15.76■□□□□ 0.11
CHD4-210ENST00000544040 HDAC7Q8WUI4 952 aa15.76■□□□□ 0.11
CHD4-210ENST00000544040 ZNF512BQ96KM6 892 aaPredicted RBP15.76■□□□□ 0.11
CHD4-210ENST00000544040 ARMC7Q9H6L4 198 aa15.76■□□□□ 0.11
CHD4-210ENST00000544040 TBC1D13Q9NVG8 400 aa15.76■□□□□ 0.11
CHD4-210ENST00000544040 NINJ2Q9NZG7 142 aa15.76■□□□□ 0.11
CHD4-210ENST00000544040 MRPS7Q9Y2R9 242 aaKnown RBP15.76■□□□□ 0.11
CHD4-210ENST00000544040 PNMA8CA0A1B0GUJ8 204 aa15.76■□□□□ 0.11
CHD4-210ENST00000544040 ZNF276Q8N554 614 aa15.76■□□□□ 0.11
CHD4-210ENST00000544040 ACTL9Q8TC94 416 aa15.76■□□□□ 0.11
CHD4-210ENST00000544040 PARK7Q99497 189 aaKnown RBP15.76■□□□□ 0.11
CHD4-210ENST00000544040 C9orf16Q9BUW7 83 aa15.76■□□□□ 0.11
CHD4-210ENST00000544040 COLEC11Q9BWP8 271 aa15.76■□□□□ 0.11
CHD4-210ENST00000544040 ARHGAP20Q9P2F6 1191 aa15.76■□□□□ 0.11
CHD4-210ENST00000544040 TIMM13Q9Y5L4 95 aaPredicted RBP15.76■□□□□ 0.11
CHD4-210ENST00000544040 CASTOR2A6NHX0 329 aa15.76■□□□□ 0.11
CHD4-210ENST00000544040 CYP2A7P20853 494 aa15.76■□□□□ 0.11
CHD4-210ENST00000544040 CCR4P51679 360 aa15.76■□□□□ 0.11
CHD4-210ENST00000544040 FAAP100Q0VG06 881 aa15.76■□□□□ 0.11
CHD4-210ENST00000544040 GIT2Q14161 759 aa15.76■□□□□ 0.11
CHD4-210ENST00000544040 TMEM132BQ14DG7 1078 aa15.76■□□□□ 0.11
CHD4-210ENST00000544040 STRIP1Q5VSL9 837 aa15.76■□□□□ 0.11
CHD4-210ENST00000544040 STK32AQ8WU08 396 aa15.76■□□□□ 0.11
CHD4-210ENST00000544040 PLEKHG4BQ96PX9 1271 aa15.76■□□□□ 0.11
CHD4-210ENST00000544040 CGRRF1Q99675 332 aa15.76■□□□□ 0.11
CHD4-210ENST00000544040 ABCB10Q9NRK6 738 aa15.76■□□□□ 0.11
CHD4-210ENST00000544040 IFRD1O00458 451 aaPredicted RBP15.76■□□□□ 0.11
CHD4-210ENST00000544040 PRLRP16471 622 aa15.76■□□□□ 0.11
CHD4-210ENST00000544040 FMO4P31512 558 aa15.76■□□□□ 0.11
CHD4-210ENST00000544040 TAB1Q15750 504 aa15.76■□□□□ 0.11
CHD4-210ENST00000544040 CTXN3Q4LDR2 81 aa15.76■□□□□ 0.11
CHD4-210ENST00000544040 C16orf46Q6P387 395 aa15.76■□□□□ 0.11
CHD4-210ENST00000544040 ZDHHC13Q8IUH4 622 aa15.76■□□□□ 0.11
CHD4-210ENST00000544040 SLC9A7Q96T83 725 aa15.76■□□□□ 0.11
CHD4-210ENST00000544040 CNPY3Q9BT09 278 aa15.76■□□□□ 0.11
CHD4-210ENST00000544040 PACSIN3Q9UKS6 424 aa15.76■□□□□ 0.11
CHD4-210ENST00000544040 A0A096LPK6 155 aa15.75■□□□□ 0.11
CHD4-210ENST00000544040 CCDC130P13994 396 aa15.75■□□□□ 0.11
CHD4-210ENST00000544040 FOSL2P15408 326 aa15.75■□□□□ 0.11
CHD4-210ENST00000544040 ITGA1P56199 1179 aa15.75■□□□□ 0.11
CHD4-210ENST00000544040 ABATP80404 500 aa15.75■□□□□ 0.11
CHD4-210ENST00000544040 TAF13Q15543 124 aa15.75■□□□□ 0.11
CHD4-210ENST00000544040 MFSD7Q6UXD7 560 aa15.75■□□□□ 0.11
CHD4-210ENST00000544040 IKBIPQ70UQ0 350 aa15.75■□□□□ 0.11
CHD4-210ENST00000544040 TATDN2Q93075 761 aa15.75■□□□□ 0.11
CHD4-210ENST00000544040 BBS4Q96RK4 519 aa15.75■□□□□ 0.11
CHD4-210ENST00000544040 VTI1BQ9UEU0 232 aa15.75■□□□□ 0.11
CHD4-210ENST00000544040 RABGEF1Q9UJ41 708 aa15.75■□□□□ 0.11
CHD4-210ENST00000544040 LAMC1P11047 1609 aa15.75■□□□□ 0.11
CHD4-210ENST00000544040 ARP10275 920 aa15.75■□□□□ 0.11
CHD4-210ENST00000544040 ZNF844Q08AG5 666 aa15.75■□□□□ 0.11
CHD4-210ENST00000544040 LPIN1Q14693 890 aa15.75■□□□□ 0.11
CHD4-210ENST00000544040 METTL6Q8TCB7 284 aa15.75■□□□□ 0.11
CHD4-210ENST00000544040 MAP10Q9P2G4 905 aa15.75■□□□□ 0.11
CHD4-210ENST00000544040 TEX28O15482 410 aa15.75■□□□□ 0.11
CHD4-210ENST00000544040 ZMPSTE24O75844 475 aa15.75■□□□□ 0.11
CHD4-210ENST00000544040 WARSP23381 471 aaKnown RBP15.75■□□□□ 0.11
CHD4-210ENST00000544040 PTENP60484 403 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms