RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 RFWD3Q6PCD5 774 aa23.53■■□□□ 1.36
CDKN3-207ENST00000543789 GALNT15Q8N3T1 639 aa23.53■■□□□ 1.36
CDKN3-207ENST00000543789 ZNF557Q8N988 423 aaPredicted RBP23.53■■□□□ 1.36
CDKN3-207ENST00000543789 SCAND2PQ9GZW5 306 aaPredicted RBP23.53■■□□□ 1.36
CDKN3-207ENST00000543789 RAXQ9Y2V3 346 aa23.53■■□□□ 1.36
CDKN3-207ENST00000543789 ZDHHC9Q9Y397 364 aa23.53■■□□□ 1.36
CDKN3-207ENST00000543789 LAMA5O15230 3695 aa23.53■■□□□ 1.36
CDKN3-207ENST00000543789 GOLGA6L7A0A1B0GV03 622 aa23.52■■□□□ 1.36
CDKN3-207ENST00000543789 SLC16A3O15427 465 aaKnown RBP23.52■■□□□ 1.36
CDKN3-207ENST00000543789 IRAK2O43187 625 aa23.52■■□□□ 1.36
CDKN3-207ENST00000543789 PCDHGA12O60330 932 aa23.52■■□□□ 1.36
CDKN3-207ENST00000543789 PRCPP42785 496 aa23.52■■□□□ 1.36
CDKN3-207ENST00000543789 GRK6P43250 576 aa23.52■■□□□ 1.36
CDKN3-207ENST00000543789 NUGGCQ68CJ6 796 aa23.52■■□□□ 1.36
CDKN3-207ENST00000543789 ZNF776Q68DI1 518 aaPredicted RBP23.52■■□□□ 1.36
CDKN3-207ENST00000543789 MSANTD2Q6P1R3 559 aa23.52■■□□□ 1.36
CDKN3-207ENST00000543789 LCLAT1Q6UWP7 414 aa23.52■■□□□ 1.36
CDKN3-207ENST00000543789 ADAT2Q7Z6V5 191 aaKnown RBP23.52■■□□□ 1.36
CDKN3-207ENST00000543789 PDZD3Q86UT5 571 aa23.52■■□□□ 1.36
CDKN3-207ENST00000543789 ENGASEQ8NFI3 743 aa23.52■■□□□ 1.36
CDKN3-207ENST00000543789 WFDC5Q8TCV5 224 aa23.52■■□□□ 1.36
CDKN3-207ENST00000543789 TSG101Q99816 390 aa23.52■■□□□ 1.36
CDKN3-207ENST00000543789 NCKAP1Q9Y2A7 1128 aa23.52■■□□□ 1.36
CDKN3-207ENST00000543789 IGLV3-27P01718 113 aa23.51■■□□□ 1.35
CDKN3-207ENST00000543789 TBXAS1P24557 533 aaPredicted RBP23.51■■□□□ 1.35
CDKN3-207ENST00000543789 CCT8P50990 548 aa23.51■■□□□ 1.35
CDKN3-207ENST00000543789 FKBP3Q00688 224 aaKnown RBP23.51■■□□□ 1.35
CDKN3-207ENST00000543789 LRMPQ12912 555 aa23.51■■□□□ 1.35
CDKN3-207ENST00000543789 KCNT1Q5JUK3 1230 aa23.51■■□□□ 1.35
CDKN3-207ENST00000543789 LAYNQ6UX15 382 aa23.51■■□□□ 1.35
CDKN3-207ENST00000543789 UBR7Q8N806 425 aa23.51■■□□□ 1.35
CDKN3-207ENST00000543789 GANCQ8TET4 914 aa23.51■■□□□ 1.35
CDKN3-207ENST00000543789 SLC35F5Q8WV83 523 aa23.51■■□□□ 1.35
CDKN3-207ENST00000543789 HNRNPLLQ8WVV9 542 aaKnown RBP23.51■■□□□ 1.35
CDKN3-207ENST00000543789 IRGQQ8WZA9 623 aa23.51■■□□□ 1.35
CDKN3-207ENST00000543789 AZIN2Q96A70 460 aa23.51■■□□□ 1.35
CDKN3-207ENST00000543789 RSPH9Q9H1X1 276 aaPredicted RBP23.51■■□□□ 1.35
CDKN3-207ENST00000543789 RMND1Q9NWS8 449 aa23.51■■□□□ 1.35
CDKN3-207ENST00000543789 STIM2Q9P246 746 aa23.51■■□□□ 1.35
CDKN3-207ENST00000543789 DKK4Q9UBT3 224 aa23.51■■□□□ 1.35
CDKN3-207ENST00000543789 H0Y8X5 98 aa23.5■■□□□ 1.35
CDKN3-207ENST00000543789 ACSL4O60488 711 aa23.5■■□□□ 1.35
CDKN3-207ENST00000543789 GABBR2O75899 941 aa23.5■■□□□ 1.35
CDKN3-207ENST00000543789 SLC6A4P31645 630 aa23.5■■□□□ 1.35
CDKN3-207ENST00000543789 CTSKP43235 329 aa23.5■■□□□ 1.35
CDKN3-207ENST00000543789 RGS7P49802 495 aa23.5■■□□□ 1.35
CDKN3-207ENST00000543789 ST8SIA6P61647 398 aa23.5■■□□□ 1.35
CDKN3-207ENST00000543789 FAM133BQ5BKY9 247 aaKnown RBP23.5■■□□□ 1.35
CDKN3-207ENST00000543789 KIAA0895LQ68EN5 471 aa23.5■■□□□ 1.35
CDKN3-207ENST00000543789 PMF1Q6P1K2 205 aa23.5■■□□□ 1.35
CDKN3-207ENST00000543789 USP30Q70CQ3 517 aa23.5■■□□□ 1.35
CDKN3-207ENST00000543789 MARCH9Q86YJ5 346 aa23.5■■□□□ 1.35
CDKN3-207ENST00000543789 MFN1Q8IWA4 741 aa23.5■■□□□ 1.35
CDKN3-207ENST00000543789 FIBINQ8TAL6 211 aa23.5■■□□□ 1.35
CDKN3-207ENST00000543789 TFAP2BQ92481 460 aa23.5■■□□□ 1.35
CDKN3-207ENST00000543789 TTC17Q96AE7 1141 aa23.5■■□□□ 1.35
CDKN3-207ENST00000543789 ORAI3Q9BRQ5 295 aa23.5■■□□□ 1.35
CDKN3-207ENST00000543789 MTG2Q9H4K7 406 aa23.5■■□□□ 1.35
CDKN3-207ENST00000543789 ARMCX3Q9UH62 379 aaPredicted RBP23.5■■□□□ 1.35
CDKN3-207ENST00000543789 SCML1Q9UN30 329 aa23.5■■□□□ 1.35
CDKN3-207ENST00000543789 ANKRD11Q6UB99 2663 aaPredicted RBP23.5■■□□□ 1.35
CDKN3-207ENST00000543789 TRABD2BA6NFA1 517 aa23.49■■□□□ 1.35
CDKN3-207ENST00000543789 PIK3R2O00459 728 aa23.49■■□□□ 1.35
CDKN3-207ENST00000543789 DFNA5O60443 496 aa23.49■■□□□ 1.35
CDKN3-207ENST00000543789 PAEPP09466 180 aa23.49■■□□□ 1.35
CDKN3-207ENST00000543789 C21orf59P57076 290 aa23.49■■□□□ 1.35
CDKN3-207ENST00000543789 TBX4P57082 545 aa23.49■■□□□ 1.35
CDKN3-207ENST00000543789 RACK1P63244 317 aaKnown RBP23.49■■□□□ 1.35
CDKN3-207ENST00000543789 SFSWAPQ12872 951 aaKnown RBP23.49■■□□□ 1.35
CDKN3-207ENST00000543789 PNOCQ13519 176 aa23.49■■□□□ 1.35
CDKN3-207ENST00000543789 CNGA2Q16280 664 aa23.49■■□□□ 1.35
CDKN3-207ENST00000543789 ANKRD40Q6AI12 368 aa23.49■■□□□ 1.35
CDKN3-207ENST00000543789 TMEM270Q6UE05 265 aa23.49■■□□□ 1.35
CDKN3-207ENST00000543789 LMLNQ96KR4 655 aa23.49■■□□□ 1.35
CDKN3-207ENST00000543789 DDX50Q9BQ39 737 aaKnown RBP23.49■■□□□ 1.35
CDKN3-207ENST00000543789 PABPC3Q9H361 631 aaKnown RBP23.49■■□□□ 1.35
CDKN3-207ENST00000543789 FBXL12Q9NXK8 326 aa23.49■■□□□ 1.35
CDKN3-207ENST00000543789 ATP6V1DQ9Y5K8 247 aa23.49■■□□□ 1.35
CDKN3-207ENST00000543789 CKAP5Q14008 2032 aa23.49■■□□□ 1.35
CDKN3-207ENST00000543789 FAM47DPA6NHR8 397 aa23.48■■□□□ 1.35
CDKN3-207ENST00000543789 RNASEH1O60930 286 aaKnown RBP23.48■■□□□ 1.35
CDKN3-207ENST00000543789 LTFP02788 710 aa23.48■■□□□ 1.35
CDKN3-207ENST00000543789 IGHV4-34P06331 123 aa23.48■■□□□ 1.35
CDKN3-207ENST00000543789 CYP4F3Q08477 520 aa23.48■■□□□ 1.35
CDKN3-207ENST00000543789 SOWAHCQ53LP3 525 aaPredicted RBP23.48■■□□□ 1.35
CDKN3-207ENST00000543789 COBLL1Q53SF7 1204 aa23.48■■□□□ 1.35
CDKN3-207ENST00000543789 CCDC157Q569K6 752 aa23.48■■□□□ 1.35
CDKN3-207ENST00000543789 ZNF658Q5TYW1 1059 aaPredicted RBP23.48■■□□□ 1.35
CDKN3-207ENST00000543789 HJURPQ8NCD3 748 aaPredicted RBP23.48■■□□□ 1.35
CDKN3-207ENST00000543789 SLC35C1Q96A29 364 aa23.48■■□□□ 1.35
CDKN3-207ENST00000543789 MYO19Q96H55 970 aa23.48■■□□□ 1.35
CDKN3-207ENST00000543789 HSFY1Q96LI6 401 aa23.48■■□□□ 1.35
CDKN3-207ENST00000543789 ACE2Q9BYF1 805 aaPredicted RBP23.48■■□□□ 1.35
CDKN3-207ENST00000543789 SCUBE2Q9NQ36 999 aa23.48■■□□□ 1.35
CDKN3-207ENST00000543789 PCDHB4Q9Y5E5 795 aa23.48■■□□□ 1.35
CDKN3-207ENST00000543789 A0A1W2PPC4 97 aa23.47■■□□□ 1.35
CDKN3-207ENST00000543789 FAM149AA5PLN7 773 aa23.47■■□□□ 1.35
CDKN3-207ENST00000543789 VILLO15195 856 aa23.47■■□□□ 1.35
CDKN3-207ENST00000543789 PAPSS1O43252 624 aaPredicted RBP23.47■■□□□ 1.35
CDKN3-207ENST00000543789 SIN3BO75182 1162 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms