RNA–Protein interactions for RNA: ENST00000543728.1

HPS5-208, Transcript of HPS5, biogenesis of lysosomal organelles complex 2 subunit 2, human

TSL 5

Gene HPS5, Length 320 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HPS5-208	ENST00000543728	PRAMEF33	A0A0G2JMD5	474 aa		2.57	□□□□□ -2
HPS5-208	ENST00000543728		A0A1W2PRQ8	180 aa		2.57	□□□□□ -2
HPS5-208	ENST00000543728	FAM90A7P	A6NKC0	464 aa		2.57	□□□□□ -2
HPS5-208	ENST00000543728	SAC3D1	A6NKF1	404 aa		2.57	□□□□□ -2
HPS5-208	ENST00000543728	FAM90A22P	A8MWA6	464 aa		2.57	□□□□□ -2
HPS5-208	ENST00000543728	FAM90A12P	A8MX19	464 aa		2.57	□□□□□ -2
HPS5-208	ENST00000543728	GRXCR1	A8MXD5	290 aa		2.57	□□□□□ -2
HPS5-208	ENST00000543728	FAM90A23P	A8MXZ1	464 aa		2.57	□□□□□ -2
HPS5-208	ENST00000543728	P4HA2	O15460	535 aa		2.57	□□□□□ -2
HPS5-208	ENST00000543728	PRAMEF10	O60809	474 aa		2.57	□□□□□ -2
HPS5-208	ENST00000543728	LARGE1	O95461	756 aa		2.57	□□□□□ -2
HPS5-208	ENST00000543728	DNTT	P04053	509 aa		2.57	□□□□□ -2
HPS5-208	ENST00000543728	CLEC3B	P05452	202 aa		2.57	□□□□□ -2
HPS5-208	ENST00000543728	INHBB	P09529	407 aa		2.57	□□□□□ -2
HPS5-208	ENST00000543728	LAMP2	P13473	410 aa		2.57	□□□□□ -2
HPS5-208	ENST00000543728	POR	P16435	677 aa	Predicted RBP	2.57	□□□□□ -2
HPS5-208	ENST00000543728	GATA3	P23771	443 aa		2.57	□□□□□ -2
HPS5-208	ENST00000543728	CHM	P24386	653 aa		2.57	□□□□□ -2
HPS5-208	ENST00000543728	MGAT1	P26572	445 aa		2.57	□□□□□ -2
HPS5-208	ENST00000543728	ITPKB	P27987	946 aa		2.57	□□□□□ -2
HPS5-208	ENST00000543728	EPHA3	P29320	983 aa		2.57	□□□□□ -2
HPS5-208	ENST00000543728	TM4SF1	P30408	202 aa		2.57	□□□□□ -2
HPS5-208	ENST00000543728	ICAM3	P32942	547 aa		2.57	□□□□□ -2
HPS5-208	ENST00000543728	MCM5	P33992	734 aa		2.57	□□□□□ -2
HPS5-208	ENST00000543728	MSX2	P35548	267 aa	Predicted RBP	2.57	□□□□□ -2
HPS5-208	ENST00000543728	PGM1	P36871	562 aa		2.57	□□□□□ -2
HPS5-208	ENST00000543728	MLH1	P40692	756 aa		2.57	□□□□□ -2
HPS5-208	ENST00000543728	HADHA	P40939	763 aa		2.57	□□□□□ -2
HPS5-208	ENST00000543728	HARS2	P49590	506 aa	Known RBP	2.57	□□□□□ -2
HPS5-208	ENST00000543728	MCM2	P49736	904 aa		2.57	□□□□□ -2
HPS5-208	ENST00000543728	TERF1	P54274	439 aa		2.57	□□□□□ -2
HPS5-208	ENST00000543728	SLURP1	P55000	103 aa		2.57	□□□□□ -2
HPS5-208	ENST00000543728	FOXL2	P58012	376 aa		2.57	□□□□□ -2
HPS5-208	ENST00000543728	RPL15	P61313	204 aa	Known RBP	2.57	□□□□□ -2
HPS5-208	ENST00000543728	RNASEL	Q05823	741 aa	Known RBP	2.57	□□□□□ -2
HPS5-208	ENST00000543728	PTP4A2	Q12974	167 aa		2.57	□□□□□ -2
HPS5-208	ENST00000543728	CUL4A	Q13619	759 aa		2.57	□□□□□ -2
HPS5-208	ENST00000543728	E2F2	Q14209	437 aa		2.57	□□□□□ -2
HPS5-208	ENST00000543728	EIF4A2	Q14240	407 aa	Known RBP	2.57	□□□□□ -2
HPS5-208	ENST00000543728	CLCA4	Q14CN2	919 aa		2.57	□□□□□ -2
HPS5-208	ENST00000543728	AAK1	Q2M2I8	961 aa		2.57	□□□□□ -2
HPS5-208	ENST00000543728	P3H1	Q32P28	736 aa		2.57	□□□□□ -2
HPS5-208	ENST00000543728	DCAF17	Q5H9S7	520 aa	Predicted RBP	2.57	□□□□□ -2
HPS5-208	ENST00000543728	CBWD5	Q5RIA9	395 aa		2.57	□□□□□ -2
HPS5-208	ENST00000543728	LIPM	Q5VYY2	423 aa		2.57	□□□□□ -2
HPS5-208	ENST00000543728	B3GNTL1	Q67FW5	361 aa	Predicted RBP	2.57	□□□□□ -2
HPS5-208	ENST00000543728	ANKRD40	Q6AI12	368 aa		2.57	□□□□□ -2
HPS5-208	ENST00000543728	CCDC144NL	Q6NUI1	221 aa		2.57	□□□□□ -2
HPS5-208	ENST00000543728	SLC22A25	Q6T423	547 aa		2.57	□□□□□ -2
HPS5-208	ENST00000543728	ATG14	Q6ZNE5	492 aa		2.57	□□□□□ -2
HPS5-208	ENST00000543728	DPY19L3	Q6ZPD9	716 aa		2.57	□□□□□ -2
HPS5-208	ENST00000543728		Q6ZRM9	215 aa		2.57	□□□□□ -2
HPS5-208	ENST00000543728	HTR3D	Q70Z44	454 aa		2.57	□□□□□ -2
HPS5-208	ENST00000543728	LRRC8D	Q7L1W4	858 aa		2.57	□□□□□ -2
HPS5-208	ENST00000543728	TAX1BP1	Q86VP1	789 aa		2.57	□□□□□ -2
HPS5-208	ENST00000543728	ARMC8	Q8IUR7	673 aa		2.57	□□□□□ -2
HPS5-208	ENST00000543728	DIS3L2	Q8IYB7	885 aa	Known RBP	2.57	□□□□□ -2
HPS5-208	ENST00000543728	FSTL5	Q8N475	847 aa	Predicted RBP	2.57	□□□□□ -2
HPS5-208	ENST00000543728	NKAIN3	Q8N8D7	197 aa		2.57	□□□□□ -2
HPS5-208	ENST00000543728	GPATCH11	Q8N954	259 aa		2.57	□□□□□ -2
HPS5-208	ENST00000543728	LINC01356	Q8N9X3	169 aa		2.57	□□□□□ -2
HPS5-208	ENST00000543728	TMEM125	Q96AQ2	219 aa		2.57	□□□□□ -2
HPS5-208	ENST00000543728	NSUN4	Q96CB9	384 aa	Known RBP	2.57	□□□□□ -2
HPS5-208	ENST00000543728	REXO5	Q96IC2	774 aa	Known RBP	2.57	□□□□□ -2
HPS5-208	ENST00000543728	LENG8	Q96PV6	779 aa	Predicted RBP	2.57	□□□□□ -2
HPS5-208	ENST00000543728	OR14A2	Q96R54	314 aa		2.57	□□□□□ -2
HPS5-208	ENST00000543728	LMF1	Q96S06	567 aa		2.57	□□□□□ -2
HPS5-208	ENST00000543728	CLSTN3	Q9BQT9	956 aa		2.57	□□□□□ -2
HPS5-208	ENST00000543728	AMBRA1	Q9C0C7	1298 aa		2.57	□□□□□ -2
HPS5-208	ENST00000543728	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	2.57	□□□□□ -2
HPS5-208	ENST00000543728	STN1	Q9H668	368 aa	Known RBP	2.57	□□□□□ -2
HPS5-208	ENST00000543728	SEC61A2	Q9H9S3	476 aa		2.57	□□□□□ -2
HPS5-208	ENST00000543728	CD320	Q9NPF0	282 aa		2.57	□□□□□ -2
HPS5-208	ENST00000543728	LIN7C	Q9NUP9	197 aa	Known RBP	2.57	□□□□□ -2
HPS5-208	ENST00000543728	HAUS2	Q9NVX0	235 aa		2.57	□□□□□ -2
HPS5-208	ENST00000543728	FAM53C	Q9NYF3	392 aa		2.57	□□□□□ -2
HPS5-208	ENST00000543728	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	2.57	□□□□□ -2
HPS5-208	ENST00000543728	SLC25A10	Q9UBX3	287 aa	Predicted RBP	2.57	□□□□□ -2
HPS5-208	ENST00000543728	CNOT6	Q9ULM6	557 aa	Known RBP	2.57	□□□□□ -2
HPS5-208	ENST00000543728	SMG5	Q9UPR3	1016 aa	Known RBP	2.57	□□□□□ -2
HPS5-208	ENST00000543728	DRG1	Q9Y295	367 aa	Known RBP	2.57	□□□□□ -2
HPS5-208	ENST00000543728	USP15	Q9Y4E8	981 aa	Predicted RBP	2.57	□□□□□ -2
HPS5-208	ENST00000543728	POLR2A	P24928	1970 aa	Known RBP	2.57	□□□□□ -2
HPS5-208	ENST00000543728	SPATA31A3	Q5VYP0	1347 aa		2.57	□□□□□ -2
HPS5-208	ENST00000543728	KDM3A	Q9Y4C1	1321 aa		2.57	□□□□□ -2
HPS5-208	ENST00000543728	ZFYVE9	O95405	1425 aa		2.57	□□□□□ -2
HPS5-208	ENST00000543728	PRAG1	Q86YV5	1406 aa		2.57	□□□□□ -2
HPS5-208	ENST00000543728	RRBP1	Q9P2E9	1410 aa	Known RBP	2.57	□□□□□ -2
HPS5-208	ENST00000543728	THSD7A	Q9UPZ6	1657 aa		2.57	□□□□□ -2
HPS5-208	ENST00000543728	COL6A3	P12111	3177 aa		2.56	□□□□□ -2
HPS5-208	ENST00000543728	CCDC187	A0A096LP49	1063 aa		2.56	□□□□□ -2
HPS5-208	ENST00000543728	hCG_1807616	A0A1W2PRN6	198 aa		2.56	□□□□□ -2
HPS5-208	ENST00000543728	MBD3L5	A6NJ08	208 aa	Predicted RBP	2.56	□□□□□ -2
HPS5-208	ENST00000543728	MARCH11	A6NNE9	402 aa		2.56	□□□□□ -2
HPS5-208	ENST00000543728	AHRR	A9YTQ3	701 aa		2.56	□□□□□ -2
HPS5-208	ENST00000543728		F5H697	171 aa		2.56	□□□□□ -2
HPS5-208	ENST00000543728	PRRG2	O14669	202 aa		2.56	□□□□□ -2
HPS5-208	ENST00000543728	TNPO2	O14787	897 aa	Known RBP	2.56	□□□□□ -2
HPS5-208	ENST00000543728	MUSK	O15146	869 aa		2.56	□□□□□ -2
HPS5-208	ENST00000543728	LDLRAD4	O15165	306 aa		2.56	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms