RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 RUFY2Q8WXA3 655 aa4.25□□□□□ -1.73
SFSWAP-211ENST00000542813 ATRIPQ8WXE1 791 aa4.25□□□□□ -1.73
SFSWAP-211ENST00000542813 ARRDC3Q96B67 414 aa4.25□□□□□ -1.73
SFSWAP-211ENST00000542813 SH3KBP1Q96B97 665 aa4.25□□□□□ -1.73
SFSWAP-211ENST00000542813 SAAL1Q96ER3 474 aa4.25□□□□□ -1.73
SFSWAP-211ENST00000542813 MASTLQ96GX5 879 aa4.25□□□□□ -1.73
SFSWAP-211ENST00000542813 HAPLN3Q96S86 360 aa4.25□□□□□ -1.73
SFSWAP-211ENST00000542813 CD180Q99467 661 aa4.25□□□□□ -1.73
SFSWAP-211ENST00000542813 VN1R3Q9BXE9 311 aa4.25□□□□□ -1.73
SFSWAP-211ENST00000542813 MAK16Q9BXY0 300 aaKnown RBP4.25□□□□□ -1.73
SFSWAP-211ENST00000542813 REXO4Q9GZR2 422 aaKnown RBP4.25□□□□□ -1.73
SFSWAP-211ENST00000542813 GRPEL1Q9HAV7 217 aa4.25□□□□□ -1.73
SFSWAP-211ENST00000542813 PCDHB16Q9NRJ7 776 aa4.25□□□□□ -1.73
SFSWAP-211ENST00000542813 KCND2Q9NZV8 630 aa4.25□□□□□ -1.73
SFSWAP-211ENST00000542813 HCN3Q9P1Z3 774 aa4.25□□□□□ -1.73
SFSWAP-211ENST00000542813 CTTNBP2NLQ9P2B4 639 aa4.25□□□□□ -1.73
SFSWAP-211ENST00000542813 LIMA1Q9UHB6 759 aaKnown RBP4.25□□□□□ -1.73
SFSWAP-211ENST00000542813 STEAP1Q9UHE8 339 aa4.25□□□□□ -1.73
SFSWAP-211ENST00000542813 CNOT11Q9UKZ1 510 aaKnown RBP4.25□□□□□ -1.73
SFSWAP-211ENST00000542813 SORCS3Q9UPU3 1222 aa4.25□□□□□ -1.73
SFSWAP-211ENST00000542813 UBE2J1Q9Y385 318 aaPredicted RBP4.25□□□□□ -1.73
SFSWAP-211ENST00000542813 SNX14Q9Y5W7 946 aa4.25□□□□□ -1.73
SFSWAP-211ENST00000542813 CFAP43Q8NDM7 1665 aa4.25□□□□□ -1.73
SFSWAP-211ENST00000542813 FANCAO15360 1455 aa4.24□□□□□ -1.73
SFSWAP-211ENST00000542813 TBC1D3DA0A087WVF3 549 aa4.24□□□□□ -1.73
SFSWAP-211ENST00000542813 TBC1D3IA0A087WXS9 549 aa4.24□□□□□ -1.73
SFSWAP-211ENST00000542813 TBC1D3EA0A087X179 549 aa4.24□□□□□ -1.73
SFSWAP-211ENST00000542813 TBC1D3KA0A087X1G2 549 aa4.24□□□□□ -1.73
SFSWAP-211ENST00000542813 GOLGA6L10A0A0M3HER8 536 aa4.24□□□□□ -1.73
SFSWAP-211ENST00000542813 TBC1D3BA6NDS4 549 aa4.24□□□□□ -1.73
SFSWAP-211ENST00000542813 TBC1D3FA6NER0 549 aaPredicted RBP4.24□□□□□ -1.73
SFSWAP-211ENST00000542813 FAM90A7PA6NKC0 464 aa4.24□□□□□ -1.73
SFSWAP-211ENST00000542813 FAM90A22PA8MWA6 464 aa4.24□□□□□ -1.73
SFSWAP-211ENST00000542813 FAM90A12PA8MX19 464 aa4.24□□□□□ -1.73
SFSWAP-211ENST00000542813 FAM90A23PA8MXZ1 464 aa4.24□□□□□ -1.73
SFSWAP-211ENST00000542813 TBC1D3LB9A6J9 549 aa4.24□□□□□ -1.73
SFSWAP-211ENST00000542813 E7ENX8 843 aa4.24□□□□□ -1.73
SFSWAP-211ENST00000542813 MATN2O00339 956 aa4.24□□□□□ -1.73
SFSWAP-211ENST00000542813 SH2B2O14492 632 aaPredicted RBP4.24□□□□□ -1.73
SFSWAP-211ENST00000542813 FYB1O15117 783 aa4.24□□□□□ -1.73
SFSWAP-211ENST00000542813 TBCAO75347 108 aaKnown RBP4.24□□□□□ -1.73
SFSWAP-211ENST00000542813 SUN1O94901 812 aa4.24□□□□□ -1.73
SFSWAP-211ENST00000542813 TBC1D3HP0C7X1 549 aa4.24□□□□□ -1.73
SFSWAP-211ENST00000542813 KCNA2P16389 499 aa4.24□□□□□ -1.73
SFSWAP-211ENST00000542813 CD6P30203 668 aa4.24□□□□□ -1.73
SFSWAP-211ENST00000542813 GCH1P30793 250 aa4.24□□□□□ -1.73
SFSWAP-211ENST00000542813 PPARGP37231 505 aaPredicted RBP4.24□□□□□ -1.73
SFSWAP-211ENST00000542813 TNNT3P45378 269 aaPredicted RBP4.24□□□□□ -1.73
SFSWAP-211ENST00000542813 PCP4P48539 62 aa4.24□□□□□ -1.73
SFSWAP-211ENST00000542813 NDUFV1P49821 464 aa4.24□□□□□ -1.73
SFSWAP-211ENST00000542813 RCAN1P53805 252 aa4.24□□□□□ -1.73
SFSWAP-211ENST00000542813 RPL15P61313 204 aaKnown RBP4.24□□□□□ -1.73
SFSWAP-211ENST00000542813 RPL7AP62424 266 aaKnown RBP4.24□□□□□ -1.73
SFSWAP-211ENST00000542813 TAP2Q03519 686 aa4.24□□□□□ -1.73
SFSWAP-211ENST00000542813 GOLGA8FQ08AF8 430 aa4.24□□□□□ -1.73
SFSWAP-211ENST00000542813 MED22Q15528 200 aa4.24□□□□□ -1.73
SFSWAP-211ENST00000542813 BMP2KLQ5H9B9 411 aa4.24□□□□□ -1.73
SFSWAP-211ENST00000542813 C1orf141Q5JVX7 400 aa4.24□□□□□ -1.73
SFSWAP-211ENST00000542813 DEPDC1Q5TB30 811 aa4.24□□□□□ -1.73
SFSWAP-211ENST00000542813 TBC1D3GQ6DHY5 549 aa4.24□□□□□ -1.73
SFSWAP-211ENST00000542813 SFRP4Q6FHJ7 346 aaPredicted RBP4.24□□□□□ -1.73
SFSWAP-211ENST00000542813 TBC1D3CQ6IPX1 549 aa4.24□□□□□ -1.73
SFSWAP-211ENST00000542813 FAM111BQ6SJ93 734 aa4.24□□□□□ -1.73
SFSWAP-211ENST00000542813 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.24□□□□□ -1.73
SFSWAP-211ENST00000542813 CCDC105Q8IYK2 499 aa4.24□□□□□ -1.73
SFSWAP-211ENST00000542813 ULK2Q8IYT8 1036 aa4.24□□□□□ -1.73
SFSWAP-211ENST00000542813 TBC1D3Q8IZP1 549 aaPredicted RBP4.24□□□□□ -1.73
SFSWAP-211ENST00000542813 FRMD1Q8N878 549 aa4.24□□□□□ -1.73
SFSWAP-211ENST00000542813 TOR1AIP2Q8NFQ8 470 aa4.24□□□□□ -1.73
SFSWAP-211ENST00000542813 ZNF483Q8TF39 744 aaPredicted RBP4.24□□□□□ -1.73
SFSWAP-211ENST00000542813 PERPQ96FX8 193 aa4.24□□□□□ -1.73
SFSWAP-211ENST00000542813 FAR2Q96K12 515 aa4.24□□□□□ -1.73
SFSWAP-211ENST00000542813 EYA3Q99504 573 aa4.24□□□□□ -1.73
SFSWAP-211ENST00000542813 PIP5K1AQ99755 562 aa4.24□□□□□ -1.73
SFSWAP-211ENST00000542813 C17orf80Q9BSJ5 609 aa4.24□□□□□ -1.73
SFSWAP-211ENST00000542813 EDEM3Q9BZQ6 932 aa4.24□□□□□ -1.73
SFSWAP-211ENST00000542813 CLPBQ9H078 707 aa4.24□□□□□ -1.73
SFSWAP-211ENST00000542813 SMARCAD1Q9H4L7 1026 aa4.24□□□□□ -1.73
SFSWAP-211ENST00000542813 NRDE2Q9H7Z3 1164 aa4.24□□□□□ -1.73
SFSWAP-211ENST00000542813 KCNK9Q9NPC2 374 aa4.24□□□□□ -1.73
SFSWAP-211ENST00000542813 ATP8A2Q9NTI2 1148 aa4.24□□□□□ -1.73
SFSWAP-211ENST00000542813 CWC25Q9NXE8 425 aaPredicted RBP4.24□□□□□ -1.73
SFSWAP-211ENST00000542813 NTMQ9P121 344 aa4.24□□□□□ -1.73
SFSWAP-211ENST00000542813 HSFX1Q9UBD0 423 aa4.24□□□□□ -1.73
SFSWAP-211ENST00000542813 MORF4L1Q9UBU8 362 aa4.24□□□□□ -1.73
SFSWAP-211ENST00000542813 SERTAD3Q9UJW9 196 aa4.24□□□□□ -1.73
SFSWAP-211ENST00000542813 SNX5Q9Y5X3 404 aa4.24□□□□□ -1.73
SFSWAP-211ENST00000542813 KCNE2Q9Y6J6 123 aa4.24□□□□□ -1.73
SFSWAP-211ENST00000542813 PTPRTO14522 1441 aa4.23□□□□□ -1.73
SFSWAP-211ENST00000542813 LIPT2A6NK58 231 aa4.23□□□□□ -1.73
SFSWAP-211ENST00000542813 SMTNL1A8MU46 457 aa4.23□□□□□ -1.73
SFSWAP-211ENST00000542813 NKX2-8O15522 239 aa4.23□□□□□ -1.73
SFSWAP-211ENST00000542813 PRICKLE3O43900 615 aaPredicted RBP4.23□□□□□ -1.73
SFSWAP-211ENST00000542813 HLA-DOAP06340 250 aa4.23□□□□□ -1.73
SFSWAP-211ENST00000542813 TMEM225BP0DP42 221 aa4.23□□□□□ -1.73
SFSWAP-211ENST00000542813 PEPDP12955 493 aa4.23□□□□□ -1.73
SFSWAP-211ENST00000542813 CD19P15391 556 aa4.23□□□□□ -1.73
SFSWAP-211ENST00000542813 ICAM3P32942 547 aa4.23□□□□□ -1.73
SFSWAP-211ENST00000542813 ABCD1P33897 745 aa4.23□□□□□ -1.73
SFSWAP-211ENST00000542813 GRK5P34947 590 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms