RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 B2RBV5 119 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 H0Y3Z8 333 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 PIK3R2O00459 728 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 CYB561D2O14569 222 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 TBX10O75333 385 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 CSDE1O75534 798 aaKnown RBP5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 KRT36O76013 467 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 TM7SF2O76062 418 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 PRKCGP05129 697 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 LGALS2P05162 132 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 SERPINA6P08185 405 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 CYP2C8P10632 490 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 NEFHP12036 1026 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 TFE3P19532 575 aaPredicted RBP5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 AOC1P19801 751 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 CDC25CP30307 473 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 EPHX2P34913 555 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 PGM1P36871 562 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 RGS7P49802 495 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 SNX16P57768 344 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 TMPRSS15P98073 1019 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 NIPAL4Q0D2K0 466 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 AP1B1Q10567 949 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 NAB1Q13506 487 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 LAMC2Q13753 1193 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 BMPR2Q13873 1038 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 PRKG1Q13976 671 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 KCTD2Q14681 263 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 TSNAXIP1Q2TAA8 658 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 FAM182AQ5T1J6 154 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 SNX30Q5VWJ9 437 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 MBLAC2Q68D91 279 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 IRGCQ6NXR0 463 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 TAPT1Q6NXT6 567 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 SCYL2Q6P3W7 929 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 MAMDC4Q6UXC1 1216 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 THSD4Q6ZMP0 1018 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 GADL1Q6ZQY3 521 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 LIMS2Q7Z4I7 341 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 NET1Q7Z628 596 aaPredicted RBP5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 BPHLQ86WA6 291 aaPredicted RBP5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 UNC93AQ86WB7 457 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 NUDCD3Q8IVD9 361 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 ARID3BQ8IVW6 561 aaPredicted RBP5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 LMNTD2Q8IXW0 634 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 GPC2Q8N158 579 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 NDUFAF2Q8N183 169 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 ARHGAP24Q8N264 748 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 LRRC52Q8N7C0 313 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 RBM15BQ8NDT2 890 aaKnown RBP5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 STKLD1Q8NE28 680 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 COL26A1Q96A83 441 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 SLC10A4Q96EP9 437 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 CSPG4P5Q96PW8 444 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 MMP19Q99542 508 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 TRIM56Q9BRZ2 755 aaKnown RBP5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 FAM167BQ9BTA0 163 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 OSBPL1AQ9BXW6 950 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 C1orf21Q9H246 121 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 MROH8Q9H579 483 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 STN1Q9H668 368 aaKnown RBP5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 ZNF395Q9H8N7 513 aaPredicted RBP5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 PDGFCQ9NRA1 345 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 THAP1Q9NVV9 213 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 WBP1LQ9NX94 342 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 DTLQ9NZJ0 730 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 ARMCX1Q9P291 453 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 RCOR3Q9P2K3 495 aaPredicted RBP5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 MORF4L1Q9UBU8 362 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 ZNF212Q9UDV6 495 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 DNAJB4Q9UDY4 337 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 TAGLN3Q9UI15 199 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 EMCNQ9ULC0 261 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 LRCH1Q9Y2L9 728 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 CSADQ9Y600 493 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 MCM3APO60318 1980 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 POLR2AP24928 1970 aaKnown RBP5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 A0A0A0MRY4 1105 aa5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 CCDC189A1A4V9 331 aa5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 ASB14A6NK59 587 aa5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 CAPN9O14815 690 aa5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 PPEF2O14830 753 aa5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 NPTXRO95502 500 aa5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 ADH1BP00325 375 aa5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 FGF3P11487 239 aaPredicted RBP5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 VAV1P15498 845 aa5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 ALOX15P16050 662 aaPredicted RBP5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 NPR3P17342 541 aa5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 DESP17661 470 aa5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 CPOXP36551 454 aa5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 FDFT1P37268 417 aa5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 GRIA1P42261 906 aa5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 AQP5P55064 265 aa5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 ACTR3P61158 418 aa5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 IGBP1P78318 339 aa5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 KLC1Q07866 573 aa5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 STX3Q13277 289 aa5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 MRPL58Q14197 206 aaKnown RBP5.34□□□□□ -1.55
ATPAF1-212ENST00000542495 TRMT5Q32P41 509 aaKnown RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms