RNA–Protein interactions for RNA: ENST00000542367.1

CCND1-205, Transcript of cyclin D1, humanhuman

TSL 1 (best)

Gene CCND1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-205ENST00000542367 MFN1Q8IWA4 741 aa17.02■□□□□ 0.32
CCND1-205ENST00000542367 CFAP52Q8N1V2 620 aa17.02■□□□□ 0.32
CCND1-205ENST00000542367 ZNF557Q8N988 423 aaPredicted RBP17.02■□□□□ 0.32
CCND1-205ENST00000542367 FIBINQ8TAL6 211 aa17.02■□□□□ 0.32
CCND1-205ENST00000542367 DDX1Q92499 740 aaKnown RBP17.02■□□□□ 0.32
CCND1-205ENST00000542367 SIPA1Q96FS4 1042 aa17.02■□□□□ 0.32
CCND1-205ENST00000542367 SLC2A13Q96QE2 648 aa17.02■□□□□ 0.32
CCND1-205ENST00000542367 LSM14BQ9BX40 385 aaKnown RBP17.02■□□□□ 0.32
CCND1-205ENST00000542367 NAA15Q9BXJ9 866 aaKnown RBP17.02■□□□□ 0.32
CCND1-205ENST00000542367 VPS16Q9H269 839 aa17.02■□□□□ 0.32
CCND1-205ENST00000542367 TMEM245Q9H330 911 aa17.02■□□□□ 0.32
CCND1-205ENST00000542367 ITM2CQ9NQX7 267 aa17.02■□□□□ 0.32
CCND1-205ENST00000542367 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.02■□□□□ 0.32
CCND1-205ENST00000542367 ASNSD1Q9NWL6 643 aa17.02■□□□□ 0.32
CCND1-205ENST00000542367 EVLQ9UI08 416 aaPredicted RBP17.02■□□□□ 0.32
CCND1-205ENST00000542367 CEP83Q9Y592 693 aa17.02■□□□□ 0.32
CCND1-205ENST00000542367 TNRC6BQ9UPQ9 1833 aaKnown RBP17.02■□□□□ 0.31
CCND1-205ENST00000542367 TYW5A2RUC4 315 aaKnown RBP17.01■□□□□ 0.31
CCND1-205ENST00000542367 GOLGA6L22H0YM25 854 aa17.01■□□□□ 0.31
CCND1-205ENST00000542367 HSF2BPO75031 334 aa17.01■□□□□ 0.31
CCND1-205ENST00000542367 ERBB2P04626 1255 aa17.01■□□□□ 0.31
CCND1-205ENST00000542367 ATP5BP06576 529 aaKnown RBP17.01■□□□□ 0.31
CCND1-205ENST00000542367 UCHL3P15374 230 aa17.01■□□□□ 0.31
CCND1-205ENST00000542367 POLR2EP19388 210 aaKnown RBP17.01■□□□□ 0.31
CCND1-205ENST00000542367 DPP6P42658 865 aa17.01■□□□□ 0.31
CCND1-205ENST00000542367 COPAP53621 1224 aa17.01■□□□□ 0.31
CCND1-205ENST00000542367 SNX16P57768 344 aa17.01■□□□□ 0.31
CCND1-205ENST00000542367 CDK17Q00537 523 aa17.01■□□□□ 0.31
CCND1-205ENST00000542367 LMAN2Q12907 356 aa17.01■□□□□ 0.31
CCND1-205ENST00000542367 PTPRNQ16849 979 aa17.01■□□□□ 0.31
CCND1-205ENST00000542367 PTPN20Q4JDL3 420 aa17.01■□□□□ 0.31
CCND1-205ENST00000542367 RAP1GAP2Q684P5 730 aa17.01■□□□□ 0.31
CCND1-205ENST00000542367 SLC41A1Q8IVJ1 513 aa17.01■□□□□ 0.31
CCND1-205ENST00000542367 LGI2Q8N0V4 545 aa17.01■□□□□ 0.31
CCND1-205ENST00000542367 CARNMT1Q8N4J0 409 aa17.01■□□□□ 0.31
CCND1-205ENST00000542367 ZNF366Q8N895 744 aa17.01■□□□□ 0.31
CCND1-205ENST00000542367 ATP6V0D2Q8N8Y2 350 aa17.01■□□□□ 0.31
CCND1-205ENST00000542367 PRCCQ92733 491 aaPredicted RBP17.01■□□□□ 0.31
CCND1-205ENST00000542367 LMLNQ96KR4 655 aa17.01■□□□□ 0.31
CCND1-205ENST00000542367 BTN2A3PQ96KV6 586 aa17.01■□□□□ 0.31
CCND1-205ENST00000542367 NUSAP1Q9BXS6 441 aaKnown RBP17.01■□□□□ 0.31
CCND1-205ENST00000542367 PDCL3Q9H2J4 239 aa17.01■□□□□ 0.31
CCND1-205ENST00000542367 SYNCQ9H7C4 482 aa17.01■□□□□ 0.31
CCND1-205ENST00000542367 FAM204AQ9H8W3 233 aa17.01■□□□□ 0.31
CCND1-205ENST00000542367 USP36Q9P275 1121 aaKnown RBP17.01■□□□□ 0.31
CCND1-205ENST00000542367 SYNJ2BP-COX16A0A087WUM0 186 aa17■□□□□ 0.31
CCND1-205ENST00000542367 KCNU1A8MYU2 1149 aa17■□□□□ 0.31
CCND1-205ENST00000542367 DLDP09622 509 aaKnown RBP17■□□□□ 0.31
CCND1-205ENST00000542367 ACADMP11310 421 aa17■□□□□ 0.31
CCND1-205ENST00000542367 CYP11B1P15538 503 aa17■□□□□ 0.31
CCND1-205ENST00000542367 TACR2P21452 398 aa17■□□□□ 0.31
CCND1-205ENST00000542367 KCNA4P22459 653 aa17■□□□□ 0.31
CCND1-205ENST00000542367 CD6P30203 668 aa17■□□□□ 0.31
CCND1-205ENST00000542367 SLC6A3Q01959 620 aa17■□□□□ 0.31
CCND1-205ENST00000542367 CAMK2GQ13555 558 aaPredicted RBP17■□□□□ 0.31
CCND1-205ENST00000542367 CKAP5Q14008 2032 aa17■□□□□ 0.31
CCND1-205ENST00000542367 FSCBQ5H9T9 825 aa17■□□□□ 0.31
CCND1-205ENST00000542367 CDKAL1Q5VV42 579 aa17■□□□□ 0.31
CCND1-205ENST00000542367 PEAR1Q5VY43 1037 aaPredicted RBP17■□□□□ 0.31
CCND1-205ENST00000542367 SASS6Q6UVJ0 657 aa17■□□□□ 0.31
CCND1-205ENST00000542367 OLFML1Q6UWY5 402 aa17■□□□□ 0.31
CCND1-205ENST00000542367 CHSY1Q86X52 802 aa17■□□□□ 0.31
CCND1-205ENST00000542367 CCDC117Q8IWD4 279 aaPredicted RBP17■□□□□ 0.31
CCND1-205ENST00000542367 RNF34Q969K3 372 aa17■□□□□ 0.31
CCND1-205ENST00000542367 ZNF419Q96HQ0 510 aaPredicted RBP17■□□□□ 0.31
CCND1-205ENST00000542367 HSPA12BQ96MM6 686 aa17■□□□□ 0.31
CCND1-205ENST00000542367 TMEM9BQ9NQ34 198 aa17■□□□□ 0.31
CCND1-205ENST00000542367 DDIT4Q9NX09 232 aa17■□□□□ 0.31
CCND1-205ENST00000542367 WSB2Q9NYS7 404 aaPredicted RBP17■□□□□ 0.31
CCND1-205ENST00000542367 COX16Q9P0S2 106 aa17■□□□□ 0.31
CCND1-205ENST00000542367 SLC12A6Q9UHW9 1150 aa17■□□□□ 0.31
CCND1-205ENST00000542367 PI4KAP42356 2102 aa16.99■□□□□ 0.31
CCND1-205ENST00000542367 CDX4O14627 284 aaPredicted RBP16.99■□□□□ 0.31
CCND1-205ENST00000542367 LUC7L3O95232 432 aaKnown RBP16.99■□□□□ 0.31
CCND1-205ENST00000542367 CCR1P32246 355 aa16.99■□□□□ 0.31
CCND1-205ENST00000542367 HOXD12P35452 270 aa16.99■□□□□ 0.31
CCND1-205ENST00000542367 TPMTP51580 245 aa16.99■□□□□ 0.31
CCND1-205ENST00000542367 CDH18Q13634 790 aa16.99■□□□□ 0.31
CCND1-205ENST00000542367 KRT31Q15323 416 aa16.99■□□□□ 0.31
CCND1-205ENST00000542367 DUOXA1Q1HG43 343 aa16.99■□□□□ 0.31
CCND1-205ENST00000542367 TAF3Q5VWG9 929 aa16.99■□□□□ 0.31
CCND1-205ENST00000542367 DAB2IPQ5VWQ8 1189 aa16.99■□□□□ 0.31
CCND1-205ENST00000542367 SLC23A3Q6PIS1 610 aa16.99■□□□□ 0.31
CCND1-205ENST00000542367 MMS22LQ6ZRQ5 1243 aa16.99■□□□□ 0.31
CCND1-205ENST00000542367 CACUL1Q86Y37 369 aa16.99■□□□□ 0.31
CCND1-205ENST00000542367 TMEM35BQ8NCS4 154 aa16.99■□□□□ 0.31
CCND1-205ENST00000542367 OR2T3Q8NH03 318 aa16.99■□□□□ 0.31
CCND1-205ENST00000542367 TTC17Q96AE7 1141 aa16.99■□□□□ 0.31
CCND1-205ENST00000542367 TOE1Q96GM8 510 aaKnown RBP16.99■□□□□ 0.31
CCND1-205ENST00000542367 STK33Q9BYT3 514 aa16.99■□□□□ 0.31
CCND1-205ENST00000542367 ANO10Q9NW15 660 aa16.99■□□□□ 0.31
CCND1-205ENST00000542367 FANCLQ9NW38 375 aa16.99■□□□□ 0.31
CCND1-205ENST00000542367 INTS6Q9UL03 887 aaKnown RBP16.99■□□□□ 0.31
CCND1-205ENST00000542367 SPTBN2O15020 2390 aa16.98■□□□□ 0.31
CCND1-205ENST00000542367 F5H5T6 163 aa16.98■□□□□ 0.31
CCND1-205ENST00000542367 H0Y626 953 aa16.98■□□□□ 0.31
CCND1-205ENST00000542367 CFIP05156 583 aa16.98■□□□□ 0.31
CCND1-205ENST00000542367 TPM2P07951 284 aa16.98■□□□□ 0.31
CCND1-205ENST00000542367 SLC2A3P11169 496 aa16.98■□□□□ 0.31
CCND1-205ENST00000542367 ABCB4P21439 1286 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms