RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 CHMP5Q9NZZ3 219 aa16.23■□□□□ 0.19
VPS33A-206ENST00000542310 KCNJ18B7U540 433 aa16.22■□□□□ 0.19
VPS33A-206ENST00000542310 E5RJQ4 531 aa16.22■□□□□ 0.19
VPS33A-206ENST00000542310 CAPN9O14815 690 aa16.22■□□□□ 0.19
VPS33A-206ENST00000542310 GIPC1O14908 333 aa16.22■□□□□ 0.19
VPS33A-206ENST00000542310 PAPSS1O43252 624 aaPredicted RBP16.22■□□□□ 0.19
VPS33A-206ENST00000542310 OPHN1O60890 802 aa16.22■□□□□ 0.19
VPS33A-206ENST00000542310 IGLV3-25P01717 112 aa16.22■□□□□ 0.19
VPS33A-206ENST00000542310 APOEP02649 317 aa16.22■□□□□ 0.19
VPS33A-206ENST00000542310 ASLP04424 464 aa16.22■□□□□ 0.19
VPS33A-206ENST00000542310 GLI1P08151 1106 aa16.22■□□□□ 0.19
VPS33A-206ENST00000542310 POLR2EP19388 210 aaKnown RBP16.22■□□□□ 0.19
VPS33A-206ENST00000542310 CAMK4Q16566 473 aa16.22■□□□□ 0.19
VPS33A-206ENST00000542310 PIP4P1Q86T03 277 aa16.22■□□□□ 0.19
VPS33A-206ENST00000542310 SCUBE3Q8IX30 993 aa16.22■□□□□ 0.19
VPS33A-206ENST00000542310 MINDY1Q8N5J2 469 aa16.22■□□□□ 0.19
VPS33A-206ENST00000542310 KDM1BQ8NB78 822 aa16.22■□□□□ 0.19
VPS33A-206ENST00000542310 FIBINQ8TAL6 211 aa16.22■□□□□ 0.19
VPS33A-206ENST00000542310 WFDC5Q8TCV5 224 aa16.22■□□□□ 0.19
VPS33A-206ENST00000542310 CYB5D2Q8WUJ1 264 aa16.22■□□□□ 0.19
VPS33A-206ENST00000542310 LMLNQ96KR4 655 aa16.22■□□□□ 0.19
VPS33A-206ENST00000542310 LHX5Q9H2C1 402 aa16.22■□□□□ 0.19
VPS33A-206ENST00000542310 THAP9Q9H5L6 903 aa16.22■□□□□ 0.19
VPS33A-206ENST00000542310 ASNSD1Q9NWL6 643 aa16.22■□□□□ 0.19
VPS33A-206ENST00000542310 PCDHGC3Q9UN70 934 aa16.22■□□□□ 0.19
VPS33A-206ENST00000542310 NAALADL1Q9UQQ1 740 aa16.22■□□□□ 0.19
VPS33A-206ENST00000542310 A0A1B0GTW7 788 aa16.21■□□□□ 0.19
VPS33A-206ENST00000542310 BECN2A8MW95 431 aa16.21■□□□□ 0.19
VPS33A-206ENST00000542310 HLA-EP13747 358 aa16.21■□□□□ 0.19
VPS33A-206ENST00000542310 CD70P32970 193 aa16.21■□□□□ 0.19
VPS33A-206ENST00000542310 SLC14A1Q13336 389 aa16.21■□□□□ 0.19
VPS33A-206ENST00000542310 CDH18Q13634 790 aa16.21■□□□□ 0.19
VPS33A-206ENST00000542310 HNRNPDQ14103 355 aaKnown RBP16.21■□□□□ 0.19
VPS33A-206ENST00000542310 PLEKHG6Q3KR16 790 aa16.21■□□□□ 0.19
VPS33A-206ENST00000542310 MS4A13Q5J8X5 152 aa16.21■□□□□ 0.19
VPS33A-206ENST00000542310 IRF2BP1Q8IU81 584 aa16.21■□□□□ 0.19
VPS33A-206ENST00000542310 CCDC117Q8IWD4 279 aaPredicted RBP16.21■□□□□ 0.19
VPS33A-206ENST00000542310 FAM114A1Q8IWE2 563 aa16.21■□□□□ 0.19
VPS33A-206ENST00000542310 DEFB124Q8NES8 71 aa16.21■□□□□ 0.19
VPS33A-206ENST00000542310 TTC17Q96AE7 1141 aa16.21■□□□□ 0.19
VPS33A-206ENST00000542310 BTN2A3PQ96KV6 586 aa16.21■□□□□ 0.19
VPS33A-206ENST00000542310 CRACR2AQ9BSW2 395 aa16.21■□□□□ 0.19
VPS33A-206ENST00000542310 GTPBP2Q9BX10 602 aaKnown RBP16.21■□□□□ 0.19
VPS33A-206ENST00000542310 GPR174Q9BXC1 333 aa16.21■□□□□ 0.19
VPS33A-206ENST00000542310 CYTH4Q9UIA0 394 aa16.21■□□□□ 0.19
VPS33A-206ENST00000542310 NUMA1Q14980 2115 aa16.21■□□□□ 0.18
VPS33A-206ENST00000542310 TP53BP1Q12888 1972 aaPredicted RBP16.2■□□□□ 0.18
VPS33A-206ENST00000542310 GOLGA6L7A0A1B0GV03 622 aa16.2■□□□□ 0.18
VPS33A-206ENST00000542310 METTL12A8MUP2 240 aa16.2■□□□□ 0.18
VPS33A-206ENST00000542310 LUC7L3O95232 432 aaKnown RBP16.2■□□□□ 0.18
VPS33A-206ENST00000542310 SLC9A1P19634 815 aa16.2■□□□□ 0.18
VPS33A-206ENST00000542310 PON1P27169 355 aa16.2■□□□□ 0.18
VPS33A-206ENST00000542310 MTIF2P46199 727 aaKnown RBP16.2■□□□□ 0.18
VPS33A-206ENST00000542310 YWHAZP63104 245 aaKnown RBP16.2■□□□□ 0.18
VPS33A-206ENST00000542310 MTA1Q13330 715 aa16.2■□□□□ 0.18
VPS33A-206ENST00000542310 EIF4EBP2Q13542 120 aaPredicted RBP16.2■□□□□ 0.18
VPS33A-206ENST00000542310 ARID5BQ14865 1188 aa16.2■□□□□ 0.18
VPS33A-206ENST00000542310 MAN2A1Q16706 1144 aa16.2■□□□□ 0.18
VPS33A-206ENST00000542310 ST3GAL2Q16842 350 aa16.2■□□□□ 0.18
VPS33A-206ENST00000542310 TTC31Q49AM3 519 aaPredicted RBP16.2■□□□□ 0.18
VPS33A-206ENST00000542310 DCAF12L1Q5VU92 463 aa16.2■□□□□ 0.18
VPS33A-206ENST00000542310 NOX5Q96PH1 765 aa16.2■□□□□ 0.18
VPS33A-206ENST00000542310 NUCKS1Q9H1E3 243 aaKnown RBP16.2■□□□□ 0.18
VPS33A-206ENST00000542310 CLSTN2Q9H4D0 955 aa16.2■□□□□ 0.18
VPS33A-206ENST00000542310 FSCN3Q9NQT6 498 aa16.2■□□□□ 0.18
VPS33A-206ENST00000542310 SUN2Q9UH99 717 aa16.2■□□□□ 0.18
VPS33A-206ENST00000542310 SCML1Q9UN30 329 aa16.2■□□□□ 0.18
VPS33A-206ENST00000542310 WASF3Q9UPY6 502 aa16.2■□□□□ 0.18
VPS33A-206ENST00000542310 HSF2BPO75031 334 aa16.19■□□□□ 0.18
VPS33A-206ENST00000542310 GJB3O75712 270 aa16.19■□□□□ 0.18
VPS33A-206ENST00000542310 TRUB2O95900 331 aaKnown RBP16.19■□□□□ 0.18
VPS33A-206ENST00000542310 SLC2A3P11169 496 aa16.19■□□□□ 0.18
VPS33A-206ENST00000542310 ST8SIA6P61647 398 aa16.19■□□□□ 0.18
VPS33A-206ENST00000542310 RPS24P62847 133 aaKnown RBP16.19■□□□□ 0.18
VPS33A-206ENST00000542310 GRIK2Q13002 908 aa16.19■□□□□ 0.18
VPS33A-206ENST00000542310 TPD52L1Q16890 204 aaPredicted RBP16.19■□□□□ 0.18
VPS33A-206ENST00000542310 ARHGAP44Q17R89 818 aa16.19■□□□□ 0.18
VPS33A-206ENST00000542310 TTC39BQ5VTQ0 682 aaPredicted RBP16.19■□□□□ 0.18
VPS33A-206ENST00000542310 SYPL2Q5VXT5 272 aa16.19■□□□□ 0.18
VPS33A-206ENST00000542310 ZNF776Q68DI1 518 aaPredicted RBP16.19■□□□□ 0.18
VPS33A-206ENST00000542310 GJB7Q6PEY0 223 aa16.19■□□□□ 0.18
VPS33A-206ENST00000542310 CACUL1Q86Y37 369 aa16.19■□□□□ 0.18
VPS33A-206ENST00000542310 ATP6V0D2Q8N8Y2 350 aa16.19■□□□□ 0.18
VPS33A-206ENST00000542310 ADAM32Q8TC27 787 aa16.19■□□□□ 0.18
VPS33A-206ENST00000542310 MYO19Q96H55 970 aa16.19■□□□□ 0.18
VPS33A-206ENST00000542310 SLC2A13Q96QE2 648 aa16.19■□□□□ 0.18
VPS33A-206ENST00000542310 ACP6Q9NPH0 428 aa16.19■□□□□ 0.18
VPS33A-206ENST00000542310 PRSS16Q9NQE7 514 aa16.19■□□□□ 0.18
VPS33A-206ENST00000542310 STIM2Q9P246 746 aa16.19■□□□□ 0.18
VPS33A-206ENST00000542310 TJP2Q9UDY2 1190 aa16.19■□□□□ 0.18
VPS33A-206ENST00000542310 DACH1Q9UI36 760 aa16.19■□□□□ 0.18
VPS33A-206ENST00000542310 ITIH6Q6UXX5 1313 aa16.19■□□□□ 0.18
VPS33A-206ENST00000542310 MOCS3O95396 460 aa16.18■□□□□ 0.18
VPS33A-206ENST00000542310 MOCS2O96007 188 aaPredicted RBP16.18■□□□□ 0.18
VPS33A-206ENST00000542310 DNTTP04053 509 aa16.18■□□□□ 0.18
VPS33A-206ENST00000542310 SRPRAP08240 638 aaKnown RBP16.18■□□□□ 0.18
VPS33A-206ENST00000542310 ERCC5P28715 1186 aaPredicted RBP16.18■□□□□ 0.18
VPS33A-206ENST00000542310 USP8P40818 1118 aa16.18■□□□□ 0.18
VPS33A-206ENST00000542310 CSKP41240 450 aa16.18■□□□□ 0.18
VPS33A-206ENST00000542310 SNX16P57768 344 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms