RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.46■□□□□ 0.063e-6■□□□□ 10
VARS2-211ENST00000541562 C9IYK1 514 aa15.45■□□□□ 0.06
VARS2-211ENST00000541562 AIM2O14862 343 aa15.45■□□□□ 0.06
VARS2-211ENST00000541562 MSI1O43347 362 aaKnown RBP15.45■□□□□ 0.06
VARS2-211ENST00000541562 CCDC22O60826 627 aa15.45■□□□□ 0.06
VARS2-211ENST00000541562 PROCP04070 461 aa15.45■□□□□ 0.06
VARS2-211ENST00000541562 SERPINB6P35237 376 aa15.45■□□□□ 0.06
VARS2-211ENST00000541562 GJA9P57773 515 aa15.45■□□□□ 0.06
VARS2-211ENST00000541562 LAMC2Q13753 1193 aa15.45■□□□□ 0.06
VARS2-211ENST00000541562 SH3D19Q5HYK7 790 aa15.45■□□□□ 0.06
VARS2-211ENST00000541562 ZNF534Q76KX8 674 aa15.45■□□□□ 0.06
VARS2-211ENST00000541562 RPAINQ86UA6 219 aa15.45■□□□□ 0.06
VARS2-211ENST00000541562 NAT14Q8WUY8 206 aa15.45■□□□□ 0.06
VARS2-211ENST00000541562 IARS2Q9NSE4 1012 aaKnown RBP15.45■□□□□ 0.06
VARS2-211ENST00000541562 ZNF646O15015 1829 aaPredicted RBP15.45■□□□□ 0.06
VARS2-211ENST00000541562 ETV4P43268 484 aa15.45■□□□□ 0.06
VARS2-211ENST00000541562 ARPP19P56211 112 aa15.45■□□□□ 0.06
VARS2-211ENST00000541562 CTC1Q2NKJ3 1217 aa15.45■□□□□ 0.06
VARS2-211ENST00000541562 LPCAT4Q643R3 524 aa15.45■□□□□ 0.06
VARS2-211ENST00000541562 TLDC1Q6P9B6 456 aa15.45■□□□□ 0.06
VARS2-211ENST00000541562 LDB1Q86U70 411 aaPredicted RBP15.45■□□□□ 0.06
VARS2-211ENST00000541562 DNAJC9Q8WXX5 260 aa15.45■□□□□ 0.06
VARS2-211ENST00000541562 FCRL3Q96P31 734 aaPredicted RBP15.45■□□□□ 0.06
VARS2-211ENST00000541562 EBNA1BP2Q99848 306 aaKnown RBP15.45■□□□□ 0.06
VARS2-211ENST00000541562 CYP4F12Q9HCS2 524 aa15.45■□□□□ 0.06
VARS2-211ENST00000541562 ARHGEF4Q9NR80 690 aa15.45■□□□□ 0.06
VARS2-211ENST00000541562 MTMR10Q9NXD2 777 aa15.45■□□□□ 0.06
VARS2-211ENST00000541562 TRIP12Q14669 1992 aaPredicted RBP15.45■□□□□ 0.06
VARS2-211ENST00000541562 DPPA5A6NC42 116 aa15.45■□□□□ 0.06
VARS2-211ENST00000541562 EEF2KO00418 725 aaKnown RBP15.45■□□□□ 0.06
VARS2-211ENST00000541562 PMPCBO75439 489 aa15.45■□□□□ 0.06
VARS2-211ENST00000541562 SLC25A27O95847 323 aa15.45■□□□□ 0.06
VARS2-211ENST00000541562 DESP17661 470 aa15.45■□□□□ 0.06
VARS2-211ENST00000541562 ITKQ08881 620 aa15.45■□□□□ 0.06
VARS2-211ENST00000541562 CTBP1Q13363 440 aa15.45■□□□□ 0.06
VARS2-211ENST00000541562 PDE1CQ14123 709 aaPredicted RBP15.45■□□□□ 0.06
VARS2-211ENST00000541562 STILQ15468 1287 aa15.45■□□□□ 0.06
VARS2-211ENST00000541562 TMEM198Q66K66 360 aa15.45■□□□□ 0.06
VARS2-211ENST00000541562 STRA8Q7Z7C7 330 aa15.45■□□□□ 0.06
VARS2-211ENST00000541562 TDRPQ86YL5 185 aa15.45■□□□□ 0.06
VARS2-211ENST00000541562 FAM156AQ8NDB6 213 aa15.45■□□□□ 0.06
VARS2-211ENST00000541562 RNF139Q8WU17 664 aa15.45■□□□□ 0.06
VARS2-211ENST00000541562 GCOM2Q9BZD3 368 aaPredicted RBP15.45■□□□□ 0.06
VARS2-211ENST00000541562 EBF2Q9HAK2 575 aa15.45■□□□□ 0.06
VARS2-211ENST00000541562 XAB2Q9HCS7 855 aaKnown RBP15.45■□□□□ 0.06
VARS2-211ENST00000541562 ALDOAP04075 364 aaKnown RBP15.44■□□□□ 0.06
VARS2-211ENST00000541562 HMBSP08397 361 aa15.44■□□□□ 0.06
VARS2-211ENST00000541562 SMIM10L2AP0DMW4 78 aa15.44■□□□□ 0.06
VARS2-211ENST00000541562 SMIM10L2BP0DMW5 78 aa15.44■□□□□ 0.06
VARS2-211ENST00000541562 ARRB2P32121 409 aa15.44■□□□□ 0.06
VARS2-211ENST00000541562 EPHX2P34913 555 aa15.44■□□□□ 0.06
VARS2-211ENST00000541562 POU5F1BQ06416 359 aa15.44■□□□□ 0.06
VARS2-211ENST00000541562 CUL3Q13618 768 aa15.44■□□□□ 0.06
VARS2-211ENST00000541562 SLC45A4Q5BKX6 768 aa15.44■□□□□ 0.06
VARS2-211ENST00000541562 CAPRIN2Q6IMN6 1127 aaKnown RBP15.44■□□□□ 0.06
VARS2-211ENST00000541562 ZNF567Q8N184 647 aa15.44■□□□□ 0.06
VARS2-211ENST00000541562 PHTF2Q8N3S3 785 aa15.44■□□□□ 0.06
VARS2-211ENST00000541562 ASB7Q9H672 318 aa15.44■□□□□ 0.06
VARS2-211ENST00000541562 GOLGA4Q13439 2230 aaKnown RBP15.44■□□□□ 0.06
VARS2-211ENST00000541562 ZBTB24O43167 697 aaPredicted RBP15.44■□□□□ 0.06
VARS2-211ENST00000541562 CHRNGP07510 517 aa15.44■□□□□ 0.06
VARS2-211ENST00000541562 CEP128Q6ZU80 1094 aa15.44■□□□□ 0.06
VARS2-211ENST00000541562 IPMKQ8NFU5 416 aa15.44■□□□□ 0.06
VARS2-211ENST00000541562 SCAMP5Q8TAC9 235 aa15.44■□□□□ 0.06
VARS2-211ENST00000541562 GSDMBQ8TAX9 411 aa15.44■□□□□ 0.06
VARS2-211ENST00000541562 APBA2Q99767 749 aa15.44■□□□□ 0.06
VARS2-211ENST00000541562 I6L893 689 aaPredicted RBP15.44■□□□□ 0.06
VARS2-211ENST00000541562 AP1G2O75843 785 aa15.44■□□□□ 0.06
VARS2-211ENST00000541562 PGK1P00558 417 aa15.44■□□□□ 0.06
VARS2-211ENST00000541562 LTFP02788 710 aa15.44■□□□□ 0.06
VARS2-211ENST00000541562 BRCC3P46736 316 aa15.44■□□□□ 0.06
VARS2-211ENST00000541562 NME5P56597 212 aa15.44■□□□□ 0.06
VARS2-211ENST00000541562 ACVR2BQ13705 512 aa15.44■□□□□ 0.06
VARS2-211ENST00000541562 LGSNQ5TDP6 509 aa15.44■□□□□ 0.06
VARS2-211ENST00000541562 KBTBD7Q8WVZ9 684 aa15.44■□□□□ 0.06
VARS2-211ENST00000541562 C20orf96Q9NUD7 363 aaPredicted RBP15.44■□□□□ 0.06
VARS2-211ENST00000541562 SFMBT1Q9UHJ3 866 aa15.44■□□□□ 0.06
VARS2-211ENST00000541562 MTF2Q9Y483 593 aaPredicted RBP15.44■□□□□ 0.06
VARS2-211ENST00000541562 PAPPA2Q9BXP8 1791 aa15.43■□□□□ 0.06
VARS2-211ENST00000541562 C9JVG2 144 aa15.43■□□□□ 0.06
VARS2-211ENST00000541562 NVLO15381 856 aaKnown RBP15.43■□□□□ 0.06
VARS2-211ENST00000541562 ERCC2P18074 760 aa15.43■□□□□ 0.06
VARS2-211ENST00000541562 CCNHP51946 323 aaPredicted RBP15.43■□□□□ 0.06
VARS2-211ENST00000541562 PDCD2Q16342 344 aaPredicted RBP15.43■□□□□ 0.06
VARS2-211ENST00000541562 PPM1LQ5SGD2 360 aa15.43■□□□□ 0.06
VARS2-211ENST00000541562 THEMIS2Q5TEJ8 643 aa15.43■□□□□ 0.06
VARS2-211ENST00000541562 KIAA0319Q5VV43 1072 aa15.43■□□□□ 0.06
VARS2-211ENST00000541562 TMEM209Q96SK2 561 aa15.43■□□□□ 0.06
VARS2-211ENST00000541562 FOXP3Q9BZS1 431 aa15.43■□□□□ 0.06
VARS2-211ENST00000541562 DDX43Q9NXZ2 648 aaKnown RBP15.43■□□□□ 0.06
VARS2-211ENST00000541562 ITGA11Q9UKX5 1188 aa15.43■□□□□ 0.06
VARS2-211ENST00000541562 MTO1Q9Y2Z2 717 aaKnown RBP15.43■□□□□ 0.06
VARS2-211ENST00000541562 RLFQ13129 1914 aa15.43■□□□□ 0.06
VARS2-211ENST00000541562 ASB14A6NK59 587 aa15.43■□□□□ 0.06
VARS2-211ENST00000541562 TK2O00142 265 aa15.43■□□□□ 0.06
VARS2-211ENST00000541562 TM9SF1O15321 606 aa15.43■□□□□ 0.06
VARS2-211ENST00000541562 MMP3P08254 477 aa15.43■□□□□ 0.06
VARS2-211ENST00000541562 BDNFP23560 247 aa15.43■□□□□ 0.06
VARS2-211ENST00000541562 ABCD1P33897 745 aa15.43■□□□□ 0.06
VARS2-211ENST00000541562 SLC1A6P48664 564 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms