RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 CTTNBP2NLQ9P2B4 639 aa19.42■□□□□ 0.7
VPS33A-205ENST00000541169 MUC3AQ02505 3323 aa19.41■□□□□ 0.7
VPS33A-205ENST00000541169 SHISA7A6NL88 538 aa19.41■□□□□ 0.7
VPS33A-205ENST00000541169 NPC1O15118 1278 aa19.41■□□□□ 0.7
VPS33A-205ENST00000541169 KAT7O95251 611 aa19.41■□□□□ 0.7
VPS33A-205ENST00000541169 GJB6O95452 261 aa19.41■□□□□ 0.7
VPS33A-205ENST00000541169 TARSP26639 723 aaKnown RBP19.41■□□□□ 0.7
VPS33A-205ENST00000541169 SLC6A4P31645 630 aa19.41■□□□□ 0.7
VPS33A-205ENST00000541169 SLC12A1Q13621 1099 aa19.41■□□□□ 0.7
VPS33A-205ENST00000541169 AUHQ13825 339 aaKnown RBP19.41■□□□□ 0.7
VPS33A-205ENST00000541169 CCINQ13939 588 aa19.41■□□□□ 0.7
VPS33A-205ENST00000541169 EFHC2Q5JST6 749 aa19.41■□□□□ 0.7
VPS33A-205ENST00000541169 RAP1GAP2Q684P5 730 aa19.41■□□□□ 0.7
VPS33A-205ENST00000541169 CWF19L1Q69YN2 538 aaKnown RBP19.41■□□□□ 0.7
VPS33A-205ENST00000541169 TXNDC11Q6PKC3 985 aa19.41■□□□□ 0.7
VPS33A-205ENST00000541169 FAM131BQ86XD5 332 aa19.41■□□□□ 0.7
VPS33A-205ENST00000541169 LGI2Q8N0V4 545 aa19.41■□□□□ 0.7
VPS33A-205ENST00000541169 ZNF687Q8N1G0 1237 aa19.41■□□□□ 0.7
VPS33A-205ENST00000541169 ZNF564Q8TBZ8 553 aaPredicted RBP19.41■□□□□ 0.7
VPS33A-205ENST00000541169 RFFLQ8WZ73 363 aa19.41■□□□□ 0.7
VPS33A-205ENST00000541169 CHFRQ96EP1 664 aa19.41■□□□□ 0.7
VPS33A-205ENST00000541169 ADAM33Q9BZ11 813 aa19.41■□□□□ 0.7
VPS33A-205ENST00000541169 C11orf16Q9NQ32 467 aa19.41■□□□□ 0.7
VPS33A-205ENST00000541169 DONSONQ9NYP3 566 aa19.41■□□□□ 0.7
VPS33A-205ENST00000541169 ANAPC7Q9UJX3 599 aa19.41■□□□□ 0.7
VPS33A-205ENST00000541169 NDRG2Q9UN36 371 aaKnown RBP19.41■□□□□ 0.7
VPS33A-205ENST00000541169 F5P12259 2224 aa19.41■□□□□ 0.7
VPS33A-205ENST00000541169 KIAA1549LQ6ZVL6 1849 aa19.41■□□□□ 0.7
VPS33A-205ENST00000541169 MIA3Q5JRA6 1907 aa19.41■□□□□ 0.7
VPS33A-205ENST00000541169 A0A1B0GVM2 712 aa19.4■□□□□ 0.7
VPS33A-205ENST00000541169 TCAF2A6NFQ2 919 aa19.4■□□□□ 0.7
VPS33A-205ENST00000541169 TBL1XO60907 577 aa19.4■□□□□ 0.7
VPS33A-205ENST00000541169 CLDN11O75508 207 aa19.4■□□□□ 0.7
VPS33A-205ENST00000541169 MTA2O94776 668 aa19.4■□□□□ 0.7
VPS33A-205ENST00000541169 CHRNB1P11230 501 aa19.4■□□□□ 0.7
VPS33A-205ENST00000541169 CD72P21854 359 aa19.4■□□□□ 0.7
VPS33A-205ENST00000541169 HOXD9P28356 352 aaPredicted RBP19.4■□□□□ 0.7
VPS33A-205ENST00000541169 MAGEA1P43355 309 aa19.4■□□□□ 0.7
VPS33A-205ENST00000541169 VCPP55072 806 aaKnown RBP19.4■□□□□ 0.7
VPS33A-205ENST00000541169 EIF4HQ15056 248 aaKnown RBP19.4■□□□□ 0.7
VPS33A-205ENST00000541169 RFWD3Q6PCD5 774 aa19.4■□□□□ 0.7
VPS33A-205ENST00000541169 CHST9Q7L1S5 443 aa19.4■□□□□ 0.7
VPS33A-205ENST00000541169 TRMT11Q7Z4G4 463 aaKnown RBP19.4■□□□□ 0.7
VPS33A-205ENST00000541169 CCDC105Q8IYK2 499 aa19.4■□□□□ 0.7
VPS33A-205ENST00000541169 TERB1Q8NA31 727 aa19.4■□□□□ 0.7
VPS33A-205ENST00000541169 FIBINQ8TAL6 211 aa19.4■□□□□ 0.7
VPS33A-205ENST00000541169 WFIKKN2Q8TEU8 576 aa19.4■□□□□ 0.7
VPS33A-205ENST00000541169 RPRD1AQ96P16 312 aaPredicted RBP19.4■□□□□ 0.7
VPS33A-205ENST00000541169 FOXQ1Q9C009 403 aa19.4■□□□□ 0.7
VPS33A-205ENST00000541169 LMAN1LQ9HAT1 526 aa19.4■□□□□ 0.7
VPS33A-205ENST00000541169 PPARGC1AQ9UBK2 798 aaKnown RBP19.4■□□□□ 0.7
VPS33A-205ENST00000541169 OR12D3Q9UGF7 316 aa19.4■□□□□ 0.7
VPS33A-205ENST00000541169 HS3ST4Q9Y661 456 aa19.4■□□□□ 0.7
VPS33A-205ENST00000541169 COL4A3Q01955 1670 aa19.4■□□□□ 0.7
VPS33A-205ENST00000541169 IGLV3-10A0A075B6K4 115 aa19.39■□□□□ 0.69
VPS33A-205ENST00000541169 A0A0A6YYK5 440 aaPredicted RBP19.39■□□□□ 0.69
VPS33A-205ENST00000541169 GOLGA6L7A0A1B0GV03 622 aa19.39■□□□□ 0.69
VPS33A-205ENST00000541169 TBC1D3BA6NDS4 549 aa19.39■□□□□ 0.69
VPS33A-205ENST00000541169 PRPSAP2O60256 369 aa19.39■□□□□ 0.69
VPS33A-205ENST00000541169 MRPS21P82921 87 aaKnown RBP19.39■□□□□ 0.69
VPS33A-205ENST00000541169 CDH18Q13634 790 aa19.39■□□□□ 0.69
VPS33A-205ENST00000541169 DMC1Q14565 340 aa19.39■□□□□ 0.69
VPS33A-205ENST00000541169 GSE1Q14687 1217 aa19.39■□□□□ 0.69
VPS33A-205ENST00000541169 BOLA3Q53S33 107 aa19.39■□□□□ 0.69
VPS33A-205ENST00000541169 FSTL4Q6MZW2 842 aa19.39■□□□□ 0.69
VPS33A-205ENST00000541169 FBXL22Q6P050 247 aa19.39■□□□□ 0.69
VPS33A-205ENST00000541169 SCYL2Q6P3W7 929 aa19.39■□□□□ 0.69
VPS33A-205ENST00000541169 UCMAQ8WVF2 138 aa19.39■□□□□ 0.69
VPS33A-205ENST00000541169 SIK2Q9H0K1 926 aa19.39■□□□□ 0.69
VPS33A-205ENST00000541169 CHRDQ9H2X0 955 aa19.39■□□□□ 0.69
VPS33A-205ENST00000541169 XPO7Q9UIA9 1087 aaKnown RBP19.39■□□□□ 0.69
VPS33A-205ENST00000541169 STARD13Q9Y3M8 1113 aa19.39■□□□□ 0.69
VPS33A-205ENST00000541169 PCDHA13Q9Y5I0 950 aa19.39■□□□□ 0.69
VPS33A-205ENST00000541169 SOWAHDA6NJG2 315 aa19.38■□□□□ 0.69
VPS33A-205ENST00000541169 TSPAN3O60637 253 aa19.38■□□□□ 0.69
VPS33A-205ENST00000541169 LUC7L3O95232 432 aaKnown RBP19.38■□□□□ 0.69
VPS33A-205ENST00000541169 PDGFBP01127 241 aaPredicted RBP19.38■□□□□ 0.69
VPS33A-205ENST00000541169 CISD3P0C7P0 127 aa19.38■□□□□ 0.69
VPS33A-205ENST00000541169 AVPR2P30518 371 aa19.38■□□□□ 0.69
VPS33A-205ENST00000541169 L1CAMP32004 1257 aa19.38■□□□□ 0.69
VPS33A-205ENST00000541169 MAN1A1P33908 653 aa19.38■□□□□ 0.69
VPS33A-205ENST00000541169 HADHBP55084 474 aaKnown RBP19.38■□□□□ 0.69
VPS33A-205ENST00000541169 CDH4P55283 916 aa19.38■□□□□ 0.69
VPS33A-205ENST00000541169 OGDHQ02218 1023 aa19.38■□□□□ 0.69
VPS33A-205ENST00000541169 HADHQ16836 314 aaKnown RBP19.38■□□□□ 0.69
VPS33A-205ENST00000541169 ERMARDQ5T6L9 678 aa19.38■□□□□ 0.69
VPS33A-205ENST00000541169 SH3PXD2AQ5TCZ1 1133 aa19.38■□□□□ 0.69
VPS33A-205ENST00000541169 ANKS1BQ7Z6G8 1248 aa19.38■□□□□ 0.69
VPS33A-205ENST00000541169 DNAAF5Q86Y56 855 aa19.38■□□□□ 0.69
VPS33A-205ENST00000541169 MFN1Q8IWA4 741 aa19.38■□□□□ 0.69
VPS33A-205ENST00000541169 AHI1Q8N157 1196 aa19.38■□□□□ 0.69
VPS33A-205ENST00000541169 PHTF2Q8N3S3 785 aa19.38■□□□□ 0.69
VPS33A-205ENST00000541169 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.38■□□□□ 0.69
VPS33A-205ENST00000541169 NAT16Q8N8M0 369 aa19.38■□□□□ 0.69
VPS33A-205ENST00000541169 SLC35G2Q8TBE7 412 aa19.38■□□□□ 0.69
VPS33A-205ENST00000541169 PRICKLE1Q96MT3 831 aaPredicted RBP19.38■□□□□ 0.69
VPS33A-205ENST00000541169 LRFN3Q9BTN0 628 aa19.38■□□□□ 0.69
VPS33A-205ENST00000541169 KCNH6Q9H252 994 aa19.38■□□□□ 0.69
VPS33A-205ENST00000541169 PLK2Q9NYY3 685 aa19.38■□□□□ 0.69
VPS33A-205ENST00000541169 MYOFQ9NZM1 2061 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms