RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 PLCB1Q9NQ66 1216 aa6.83□□□□□ -1.32
YBX3-210ENST00000540975 SLC12A4Q9UP95 1085 aa6.83□□□□□ -1.32
YBX3-210ENST00000540975 LY6G6EA0A0G2JKS1 128 aa6.82□□□□□ -1.32
YBX3-210ENST00000540975 SKAP2O75563 359 aaPredicted RBP6.82□□□□□ -1.32
YBX3-210ENST00000540975 PDIA3P30101 505 aaKnown RBP6.82□□□□□ -1.32
YBX3-210ENST00000540975 TLE3Q04726 772 aa6.82□□□□□ -1.32
YBX3-210ENST00000540975 SRSF1Q07955 248 aaKnown RBP eCLIP6.82□□□□□ -1.32
YBX3-210ENST00000540975 MTX1Q13505 466 aa6.82□□□□□ -1.32
YBX3-210ENST00000540975 MORC3Q14149 939 aa6.82□□□□□ -1.32
YBX3-210ENST00000540975 ZACNQ401N2 412 aa6.82□□□□□ -1.32
YBX3-210ENST00000540975 LIPMQ5VYY2 423 aa6.82□□□□□ -1.32
YBX3-210ENST00000540975 IRF2BP2Q7Z5L9 587 aa6.82□□□□□ -1.32
YBX3-210ENST00000540975 ADGRF4Q8IZF3 695 aa6.82□□□□□ -1.32
YBX3-210ENST00000540975 SAMD3Q8N6K7 520 aa6.82□□□□□ -1.32
YBX3-210ENST00000540975 TRMOQ9BU70 441 aa6.82□□□□□ -1.32
YBX3-210ENST00000540975 SFXN1Q9H9B4 322 aa6.82□□□□□ -1.32
YBX3-210ENST00000540975 RAB21Q9UL25 225 aa6.82□□□□□ -1.32
YBX3-210ENST00000540975 CNTN6Q9UQ52 1028 aa6.82□□□□□ -1.32
YBX3-210ENST00000540975 TTBK1Q5TCY1 1321 aaPredicted RBP6.81□□□□□ -1.32
YBX3-210ENST00000540975 FAM90A18PA6NE21 464 aa6.81□□□□□ -1.32
YBX3-210ENST00000540975 FAM90A16PA6NEW6 464 aa6.81□□□□□ -1.32
YBX3-210ENST00000540975 FAM90A9PA6NNJ1 464 aa6.81□□□□□ -1.32
YBX3-210ENST00000540975 FAM90A5PA8MXJ8 464 aa6.81□□□□□ -1.32
YBX3-210ENST00000540975 UGDHO60701 494 aa6.81□□□□□ -1.32
YBX3-210ENST00000540975 CNTN5O94779 1100 aa6.81□□□□□ -1.32
YBX3-210ENST00000540975 IGKV2-30P06310 120 aa6.81□□□□□ -1.32
YBX3-210ENST00000540975 FAM90A15PP0C7V4 464 aa6.81□□□□□ -1.32
YBX3-210ENST00000540975 FAM90A14PP0C7W9 464 aa6.81□□□□□ -1.32
YBX3-210ENST00000540975 GYS1P13807 737 aa6.81□□□□□ -1.32
YBX3-210ENST00000540975 IGFBP2P18065 325 aa6.81□□□□□ -1.32
YBX3-210ENST00000540975 SERPINF1P36955 418 aa6.81□□□□□ -1.32
YBX3-210ENST00000540975 KRTAP10-11P60412 298 aa6.81□□□□□ -1.32
YBX3-210ENST00000540975 RBM6P78332 1123 aaKnown RBP6.81□□□□□ -1.32
YBX3-210ENST00000540975 TWIST1Q15672 202 aa6.81□□□□□ -1.32
YBX3-210ENST00000540975 GLCCI1Q86VQ1 547 aa6.81□□□□□ -1.32
YBX3-210ENST00000540975 SPICE1Q8N0Z3 855 aa6.81□□□□□ -1.32
YBX3-210ENST00000540975 ZNF347Q96SE7 839 aa6.81□□□□□ -1.32
YBX3-210ENST00000540975 MPHOSPH6Q99547 160 aaKnown RBP6.81□□□□□ -1.32
YBX3-210ENST00000540975 TUBB6Q9BUF5 446 aa6.81□□□□□ -1.32
YBX3-210ENST00000540975 KATNAL1Q9BW62 490 aa6.81□□□□□ -1.32
YBX3-210ENST00000540975 FOXP1Q9H334 677 aaPredicted RBP6.81□□□□□ -1.32
YBX3-210ENST00000540975 IPO11Q9UI26 975 aaKnown RBP6.81□□□□□ -1.32
YBX3-210ENST00000540975 TRPC5Q9UL62 973 aaPredicted RBP6.81□□□□□ -1.32
YBX3-210ENST00000540975 HS3ST3B1Q9Y662 390 aa6.81□□□□□ -1.32
YBX3-210ENST00000540975 LMTK3Q96Q04 1460 aa6.8□□□□□ -1.32
YBX3-210ENST00000540975 LARGE1O95461 756 aa6.8□□□□□ -1.32
YBX3-210ENST00000540975 BMP15O95972 392 aa6.8□□□□□ -1.32
YBX3-210ENST00000540975 ME1P48163 572 aa6.8□□□□□ -1.32
YBX3-210ENST00000540975 FAM3BP58499 235 aaPredicted RBP6.8□□□□□ -1.32
YBX3-210ENST00000540975 SHC2P98077 582 aa6.8□□□□□ -1.32
YBX3-210ENST00000540975 B4GALNT1Q00973 533 aa6.8□□□□□ -1.32
YBX3-210ENST00000540975 ICA1Q05084 483 aa6.8□□□□□ -1.32
YBX3-210ENST00000540975 ATPAF1Q5TC12 328 aaPredicted RBP6.8□□□□□ -1.32
YBX3-210ENST00000540975 ZNF793Q6ZN11 406 aa6.8□□□□□ -1.32
YBX3-210ENST00000540975 ARFGAP1Q8N6T3 406 aa6.8□□□□□ -1.32
YBX3-210ENST00000540975 EXD3Q8N9H8 876 aa6.8□□□□□ -1.32
YBX3-210ENST00000540975 FAM47BQ8NA70 645 aa6.8□□□□□ -1.32
YBX3-210ENST00000540975 ATG16L2Q8NAA4 619 aa6.8□□□□□ -1.32
YBX3-210ENST00000540975 ZFPM2Q8WW38 1151 aa6.8□□□□□ -1.32
YBX3-210ENST00000540975 ZBTB9Q96C00 473 aa6.8□□□□□ -1.32
YBX3-210ENST00000540975 PIMREGQ9BSJ6 248 aa6.8□□□□□ -1.32
YBX3-210ENST00000540975 TAGLN3Q9UI15 199 aa6.8□□□□□ -1.32
YBX3-210ENST00000540975 HERC5Q9UII4 1024 aaKnown RBP6.8□□□□□ -1.32
YBX3-210ENST00000540975 CYP3A7-CYP3A51PA0A087WV96 503 aa6.79□□□□□ -1.32
YBX3-210ENST00000540975 TRBV5-3A0A0A0MS03 114 aa6.79□□□□□ -1.32
YBX3-210ENST00000540975 PRPF4O43172 522 aaKnown RBP eCLIP6.79□□□□□ -1.32
YBX3-210ENST00000540975 TGM2P21980 687 aa6.79□□□□□ -1.32
YBX3-210ENST00000540975 CYP3A7P24462 503 aa6.79□□□□□ -1.32
YBX3-210ENST00000540975 GRK5P34947 590 aa6.79□□□□□ -1.32
YBX3-210ENST00000540975 POLE2P56282 527 aa6.79□□□□□ -1.32
YBX3-210ENST00000540975 TAS2R50P59544 299 aa6.79□□□□□ -1.32
YBX3-210ENST00000540975 SF3A3Q12874 501 aaKnown RBP eCLIP6.79□□□□□ -1.32
YBX3-210ENST00000540975 BTBD16Q32M84 506 aa6.79□□□□□ -1.32
YBX3-210ENST00000540975 MIDNQ504T8 468 aa6.79□□□□□ -1.32
YBX3-210ENST00000540975 EPHA10Q5JZY3 1008 aa6.79□□□□□ -1.32
YBX3-210ENST00000540975 TMEM88Q6PEY1 159 aa6.79□□□□□ -1.32
YBX3-210ENST00000540975 ADGRF3Q8IZF5 1079 aa6.79□□□□□ -1.32
YBX3-210ENST00000540975 ADPRHL1Q8NDY3 354 aa6.79□□□□□ -1.32
YBX3-210ENST00000540975 ZNF548Q8NEK5 533 aaPredicted RBP6.79□□□□□ -1.32
YBX3-210ENST00000540975 OR52N4Q8NGI2 321 aa6.79□□□□□ -1.32
YBX3-210ENST00000540975 MPLKIPQ8TAP9 179 aa6.79□□□□□ -1.32
YBX3-210ENST00000540975 HMGB4Q8WW32 186 aa6.79□□□□□ -1.32
YBX3-210ENST00000540975 PAPOLBQ9NRJ5 636 aaKnown RBP6.79□□□□□ -1.32
YBX3-210ENST00000540975 TBC1D3DA0A087WVF3 549 aa6.78□□□□□ -1.32
YBX3-210ENST00000540975 TBC1D3IA0A087WXS9 549 aa6.78□□□□□ -1.32
YBX3-210ENST00000540975 TBC1D3EA0A087X179 549 aa6.78□□□□□ -1.32
YBX3-210ENST00000540975 TBC1D3KA0A087X1G2 549 aa6.78□□□□□ -1.32
YBX3-210ENST00000540975 TBC1D3BA6NDS4 549 aa6.78□□□□□ -1.32
YBX3-210ENST00000540975 TBC1D3FA6NER0 549 aaPredicted RBP6.78□□□□□ -1.32
YBX3-210ENST00000540975 C3orf70A6NLC5 250 aaPredicted RBP6.78□□□□□ -1.32
YBX3-210ENST00000540975 SLC38A8A6NNN8 435 aa6.78□□□□□ -1.32
YBX3-210ENST00000540975 ZNF814B7Z6K7 855 aa6.78□□□□□ -1.32
YBX3-210ENST00000540975 TBC1D3LB9A6J9 549 aa6.78□□□□□ -1.32
YBX3-210ENST00000540975 F5H423 210 aaPredicted RBP6.78□□□□□ -1.32
YBX3-210ENST00000540975 F8W810 466 aa6.78□□□□□ -1.32
YBX3-210ENST00000540975 SYT5O00445 386 aa6.78□□□□□ -1.32
YBX3-210ENST00000540975 TLX3O43711 291 aaPredicted RBP6.78□□□□□ -1.32
YBX3-210ENST00000540975 ALDOAP04075 364 aaKnown RBP6.78□□□□□ -1.32
YBX3-210ENST00000540975 ITGA2BP08514 1039 aa6.78□□□□□ -1.32
YBX3-210ENST00000540975 ALDOCP09972 364 aaKnown RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms